RNA–Protein interactions for RNA: ENST00000493510.1

KPNA1-209, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-209ENST00000493510 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
KPNA1-209ENST00000493510 AEBP2Q6ZN18 517 aaPredicted RBP20.51■□□□□ 0.87
KPNA1-209ENST00000493510 PHF23Q9BUL5 403 aaPredicted RBP18.16■□□□□ 0.5
KPNA1-209ENST00000493510 DNAJC5BQ9UF47 199 aa17.92■□□□□ 0.46
KPNA1-209ENST00000493510 ABCC9O60706 1549 aa17.68■□□□□ 0.42
KPNA1-209ENST00000493510 DNAJC5Q9H3Z4 198 aa17.64■□□□□ 0.41
KPNA1-209ENST00000493510 NISCHQ9Y2I1 1504 aa17.36■□□□□ 0.37
KPNA1-209ENST00000493510 SENP3Q9H4L4 574 aaPredicted RBP17.3■□□□□ 0.36
KPNA1-209ENST00000493510 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
KPNA1-209ENST00000493510 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
KPNA1-209ENST00000493510 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
KPNA1-209ENST00000493510 RB1CC1Q8TDY2 1594 aa16.18■□□□□ 0.18
KPNA1-209ENST00000493510 CCDC180Q9P1Z9 1646 aa16.16■□□□□ 0.18
KPNA1-209ENST00000493510 CECR2Q9BXF3 1484 aa16.12■□□□□ 0.17
KPNA1-209ENST00000493510 FOXD1Q16676 465 aa16.01■□□□□ 0.15
KPNA1-209ENST00000493510 CUX2O14529 1486 aa15.91■□□□□ 0.14
KPNA1-209ENST00000493510 ADRA2BP18089 450 aa15.88■□□□□ 0.13
KPNA1-209ENST00000493510 PPP6R1Q9UPN7 881 aa15.85■□□□□ 0.13
KPNA1-209ENST00000493510 CC2D2AQ9P2K1 1620 aa15.85■□□□□ 0.13
KPNA1-209ENST00000493510 NACADO15069 1562 aa15.71■□□□□ 0.11
KPNA1-209ENST00000493510 BICRAQ9NZM4 1560 aa15.68■□□□□ 0.1
KPNA1-209ENST00000493510 UNC13AQ9UPW8 1703 aa15.57■□□□□ 0.08
KPNA1-209ENST00000493510 EIF4G1Q04637 1599 aaKnown RBP15.47■□□□□ 0.07
KPNA1-209ENST00000493510 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.07
KPNA1-209ENST00000493510 ERCC6Q03468 1493 aa15.44■□□□□ 0.06
KPNA1-209ENST00000493510 DCAF8L2P0C7V8 631 aa15.39■□□□□ 0.05
KPNA1-209ENST00000493510 ILDR1Q86SU0 546 aaPredicted RBP15.37■□□□□ 0.05
KPNA1-209ENST00000493510 KCNA4P22459 653 aa15.29■□□□□ 0.04
KPNA1-209ENST00000493510 PIAS4Q8N2W9 510 aaPredicted RBP15.22■□□□□ 0.03
KPNA1-209ENST00000493510 TRHP20396 242 aaPredicted RBP15.08■□□□□ 0
KPNA1-209ENST00000493510 MYO15BQ96JP2 1530 aa15.03■□□□□ -0
KPNA1-209ENST00000493510 PPP4R3CPQ6ZMV5 832 aa15.01□□□□□ -0.01
KPNA1-209ENST00000493510 OSCARQ8IYS5 282 aa15□□□□□ -0.01
KPNA1-209ENST00000493510 EHMT2Q96KQ7 1210 aa14.88□□□□□ -0.03
KPNA1-209ENST00000493510 THOC2Q8NI27 1593 aaKnown RBP14.84□□□□□ -0.03
KPNA1-209ENST00000493510 RIMBP3CA6NJZ7 1639 aa14.8□□□□□ -0.04
KPNA1-209ENST00000493510 RIMBP3BA6NNM3 1639 aa14.8□□□□□ -0.04
KPNA1-209ENST00000493510 RIMBP3Q9UFD9 1639 aa14.8□□□□□ -0.04
KPNA1-209ENST00000493510 NCBP3Q53F19 620 aaKnown RBP14.78□□□□□ -0.04
KPNA1-209ENST00000493510 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.04
KPNA1-209ENST00000493510 SCRIBQ14160 1630 aa14.77□□□□□ -0.05
KPNA1-209ENST00000493510 NESP48681 1621 aa14.73□□□□□ -0.05
KPNA1-209ENST00000493510 CYB5RLQ6IPT4 315 aa14.72□□□□□ -0.05
KPNA1-209ENST00000493510 ARHGEF11O15085 1522 aa14.66□□□□□ -0.06
KPNA1-209ENST00000493510 SLC4A1APQ9BWU0 796 aaKnown RBP14.66□□□□□ -0.06
KPNA1-209ENST00000493510 SMARCA2P51531 1590 aa14.63□□□□□ -0.07
KPNA1-209ENST00000493510 NCAPD3P42695 1498 aa14.57□□□□□ -0.08
KPNA1-209ENST00000493510 NPM3O75607 178 aaKnown RBP14.56□□□□□ -0.08
KPNA1-209ENST00000493510 MSH5O43196 834 aa14.52□□□□□ -0.09
KPNA1-209ENST00000493510 SCAF1Q9H7N4 1312 aaKnown RBP14.51□□□□□ -0.09
KPNA1-209ENST00000493510 LMTK3Q96Q04 1460 aa14.5□□□□□ -0.09
KPNA1-209ENST00000493510 SOCS7O14512 581 aa14.49□□□□□ -0.09
KPNA1-209ENST00000493510 PDS5BQ9NTI5 1447 aa14.48□□□□□ -0.09
KPNA1-209ENST00000493510 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.09
KPNA1-209ENST00000493510 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
KPNA1-209ENST00000493510 FBXO41Q8TF61 875 aa14.43□□□□□ -0.1
KPNA1-209ENST00000493510 LAMC3Q9Y6N6 1575 aa14.43□□□□□ -0.1
KPNA1-209ENST00000493510 ARAP1Q96P48 1450 aa14.4□□□□□ -0.1
KPNA1-209ENST00000493510 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
KPNA1-209ENST00000493510 MRC2Q9UBG0 1479 aa14.38□□□□□ -0.11
KPNA1-209ENST00000493510 WDR62O43379 1518 aa14.36□□□□□ -0.11
KPNA1-209ENST00000493510 DCAF1Q9Y4B6 1507 aa14.27□□□□□ -0.12
KPNA1-209ENST00000493510 ATAD2BQ9ULI0 1458 aa14.27□□□□□ -0.12
KPNA1-209ENST00000493510 HMGXB3Q12766 1538 aa14.26□□□□□ -0.13
KPNA1-209ENST00000493510 KDM4FA0A1W2PPD8 638 aa14.26□□□□□ -0.13
KPNA1-209ENST00000493510 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
KPNA1-209ENST00000493510 ERCC6L2Q5T890 1561 aa14.23□□□□□ -0.13
KPNA1-209ENST00000493510 ILDR2Q71H61 639 aa14.23□□□□□ -0.13
KPNA1-209ENST00000493510 RSF1Q96T23 1441 aaPredicted RBP14.17□□□□□ -0.14
KPNA1-209ENST00000493510 DISP3Q9P2K9 1392 aa14.09□□□□□ -0.15
KPNA1-209ENST00000493510 POTEDQ86YR6 584 aa14.08□□□□□ -0.16
KPNA1-209ENST00000493510 CADPSQ9ULU8 1353 aa14.07□□□□□ -0.16
KPNA1-209ENST00000493510 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
KPNA1-209ENST00000493510 ZBTB22O15209 634 aa14.06□□□□□ -0.16
KPNA1-209ENST00000493510 ZCCHC6Q5VYS8 1495 aaKnown RBP14.05□□□□□ -0.16
KPNA1-209ENST00000493510 RNF216Q9NWF9 866 aaPredicted RBP14.04□□□□□ -0.16
KPNA1-209ENST00000493510 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
KPNA1-209ENST00000493510 HECW2Q9P2P5 1572 aa14.03□□□□□ -0.16
KPNA1-209ENST00000493510 SYNJ2O15056 1496 aa13.92□□□□□ -0.18
KPNA1-209ENST00000493510 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
KPNA1-209ENST00000493510 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.18
KPNA1-209ENST00000493510 FBLN2P98095 1184 aa13.89□□□□□ -0.19
KPNA1-209ENST00000493510 ZNF608Q9ULD9 1512 aaPredicted RBP13.89□□□□□ -0.19
KPNA1-209ENST00000493510 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
KPNA1-209ENST00000493510 SMARCA4P51532 1647 aa13.85□□□□□ -0.19
KPNA1-209ENST00000493510 IFT140Q96RY7 1462 aa13.82□□□□□ -0.2
KPNA1-209ENST00000493510 HOXD11P31277 338 aaPredicted RBP13.82□□□□□ -0.2
KPNA1-209ENST00000493510 URB2Q14146 1524 aaKnown RBP13.8□□□□□ -0.2
KPNA1-209ENST00000493510 CHD1O14646 1710 aa13.79□□□□□ -0.2
KPNA1-209ENST00000493510 ADGRL1O94910 1474 aa13.77□□□□□ -0.21
KPNA1-209ENST00000493510 GAPVD1Q14C86 1478 aa13.76□□□□□ -0.21
KPNA1-209ENST00000493510 PEG3Q9GZU2 1588 aa13.72□□□□□ -0.21
KPNA1-209ENST00000493510 CLASP1Q7Z460 1538 aa13.7□□□□□ -0.22
KPNA1-209ENST00000493510 SPATA31D1Q6ZQQ2 1576 aa13.7□□□□□ -0.22
KPNA1-209ENST00000493510 KDM6BO15054 1643 aa13.69□□□□□ -0.22
KPNA1-209ENST00000493510 EIF4G3O43432 1585 aaKnown RBP13.69□□□□□ -0.22
KPNA1-209ENST00000493510 FAM69CQ0P6D2 419 aa13.65□□□□□ -0.22
KPNA1-209ENST00000493510 KIF13AQ9H1H9 1805 aa13.64□□□□□ -0.23
KPNA1-209ENST00000493510 SLC4A2P04920 1241 aa13.61□□□□□ -0.23
KPNA1-209ENST00000493510 SYNJ1O43426 1573 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms