RNA–Protein interactions for RNA: ENST00000493060.5

NVL-222, Transcript of nuclear VCP-like, humanhuman

TSL 2

Gene NVL, Length 639 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-222ENST00000493060 AEBP2Q6ZN18 517 aaPredicted RBP28.26■■■□□ 2.11
NVL-222ENST00000493060 CHIC1Q5VXU3 224 aa26.56■■□□□ 1.84
NVL-222ENST00000493060 SENP3Q9H4L4 574 aaPredicted RBP23.93■■□□□ 1.42
NVL-222ENST00000493060 PHF23Q9BUL5 403 aaPredicted RBP23.66■■□□□ 1.38
NVL-222ENST00000493060 FOXD1Q16676 465 aa22.45■■□□□ 1.18
NVL-222ENST00000493060 NISCHQ9Y2I1 1504 aa21.7■■□□□ 1.07
NVL-222ENST00000493060 PLPPR3Q6T4P5 718 aa21.06■□□□□ 0.96
NVL-222ENST00000493060 MSH5O43196 834 aa20.93■□□□□ 0.94
NVL-222ENST00000493060 PPP6R1Q9UPN7 881 aa20.91■□□□□ 0.94
NVL-222ENST00000493060 POTEDQ86YR6 584 aa20.84■□□□□ 0.93
NVL-222ENST00000493060 PIAS4Q8N2W9 510 aaPredicted RBP20.84■□□□□ 0.93
NVL-222ENST00000493060 ADRA2BP18089 450 aa20.77■□□□□ 0.92
NVL-222ENST00000493060 CCDC180Q9P1Z9 1646 aa19.68■□□□□ 0.74
NVL-222ENST00000493060 ABCC9O60706 1549 aa19.58■□□□□ 0.73
NVL-222ENST00000493060 MAPK8IP2Q13387 824 aaPredicted RBP19.16■□□□□ 0.66
NVL-222ENST00000493060 DMRT2Q9Y5R5 561 aa19.02■□□□□ 0.64
NVL-222ENST00000493060 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
NVL-222ENST00000493060 RB1CC1Q8TDY2 1594 aa18.66■□□□□ 0.58
NVL-222ENST00000493060 UNC13AQ9UPW8 1703 aa18.49■□□□□ 0.55
NVL-222ENST00000493060 NACADO15069 1562 aa18.49■□□□□ 0.55
NVL-222ENST00000493060 PPP4R3CPQ6ZMV5 832 aa18.48■□□□□ 0.55
NVL-222ENST00000493060 DNAJC5BQ9UF47 199 aa18.4■□□□□ 0.54
NVL-222ENST00000493060 HOXD11P31277 338 aaPredicted RBP18.27■□□□□ 0.52
NVL-222ENST00000493060 MYO15BQ96JP2 1530 aa18.2■□□□□ 0.5
NVL-222ENST00000493060 BICRAQ9NZM4 1560 aa18.19■□□□□ 0.5
NVL-222ENST00000493060 DCAF8L2P0C7V8 631 aa18.14■□□□□ 0.49
NVL-222ENST00000493060 CNKSR2Q8WXI2 1034 aa18.13■□□□□ 0.49
NVL-222ENST00000493060 PABPN1Q86U42 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
NVL-222ENST00000493060 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
NVL-222ENST00000493060 CACNB1Q02641 598 aaPredicted RBP18.04■□□□□ 0.48
NVL-222ENST00000493060 RNF216Q9NWF9 866 aaPredicted RBP18.04■□□□□ 0.48
NVL-222ENST00000493060 ZCCHC6Q5VYS8 1495 aaKnown RBP18■□□□□ 0.47
NVL-222ENST00000493060 DCAF1Q9Y4B6 1507 aa17.95■□□□□ 0.46
NVL-222ENST00000493060 RNF39Q9H2S5 420 aa17.94■□□□□ 0.46
NVL-222ENST00000493060 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
NVL-222ENST00000493060 SCRIBQ14160 1630 aa17.85■□□□□ 0.45
NVL-222ENST00000493060 CC2D2AQ9P2K1 1620 aa17.78■□□□□ 0.44
NVL-222ENST00000493060 EIF4G1Q04637 1599 aaKnown RBP17.7■□□□□ 0.42
NVL-222ENST00000493060 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
NVL-222ENST00000493060 C1QBPQ07021 282 aaKnown RBP17.58■□□□□ 0.4
NVL-222ENST00000493060 NCBP3Q53F19 620 aaKnown RBP17.58■□□□□ 0.4
NVL-222ENST00000493060 NPM3O75607 178 aaKnown RBP17.52■□□□□ 0.4
NVL-222ENST00000493060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.26■□□□□ 0.35
NVL-222ENST00000493060 U3KPZ7 1027 aaPredicted RBP17.05■□□□□ 0.32
NVL-222ENST00000493060 KCNA4P22459 653 aa17.04■□□□□ 0.32
NVL-222ENST00000493060 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
NVL-222ENST00000493060 NCAPD3P42695 1498 aa17.01■□□□□ 0.31
NVL-222ENST00000493060 HMGXB3Q12766 1538 aa16.97■□□□□ 0.31
NVL-222ENST00000493060 ATAD2BQ9ULI0 1458 aa16.96■□□□□ 0.31
NVL-222ENST00000493060 SMARCA2P51531 1590 aa16.94■□□□□ 0.3
NVL-222ENST00000493060 DNAJC5Q9H3Z4 198 aa16.93■□□□□ 0.3
NVL-222ENST00000493060 CUX2O14529 1486 aa16.93■□□□□ 0.3
NVL-222ENST00000493060 ERCC6Q03468 1493 aa16.88■□□□□ 0.29
NVL-222ENST00000493060 BAZ1AQ9NRL2 1556 aaPredicted RBP16.87■□□□□ 0.29
NVL-222ENST00000493060 PEG3Q9GZU2 1588 aa16.86■□□□□ 0.29
NVL-222ENST00000493060 SPINK5Q9NQ38 1064 aaPredicted RBP16.85■□□□□ 0.29
NVL-222ENST00000493060 NESP48681 1621 aa16.84■□□□□ 0.29
NVL-222ENST00000493060 SLC4A2P04920 1241 aa16.82■□□□□ 0.28
NVL-222ENST00000493060 BAZ1BQ9UIG0 1483 aaKnown RBP16.8■□□□□ 0.28
NVL-222ENST00000493060 THOC2Q8NI27 1593 aaKnown RBP16.79■□□□□ 0.28
NVL-222ENST00000493060 KIF21AQ7Z4S6 1674 aa16.78■□□□□ 0.28
NVL-222ENST00000493060 DSG3P32926 999 aa16.75■□□□□ 0.27
NVL-222ENST00000493060 MROH2BQ7Z745 1585 aa16.74■□□□□ 0.27
NVL-222ENST00000493060 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
NVL-222ENST00000493060 CAPN15O75808 1086 aa16.69■□□□□ 0.26
NVL-222ENST00000493060 WIZO95785 1651 aa16.62■□□□□ 0.25
NVL-222ENST00000493060 PDS5BQ9NTI5 1447 aa16.51■□□□□ 0.23
NVL-222ENST00000493060 WDR62O43379 1518 aa16.47■□□□□ 0.23
NVL-222ENST00000493060 CADPSQ9ULU8 1353 aa16.45■□□□□ 0.22
NVL-222ENST00000493060 MRC2Q9UBG0 1479 aa16.45■□□□□ 0.22
NVL-222ENST00000493060 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
NVL-222ENST00000493060 TRHP20396 242 aaPredicted RBP16.4■□□□□ 0.22
NVL-222ENST00000493060 ABCB7O75027 752 aa16.36■□□□□ 0.21
NVL-222ENST00000493060 CEP164Q9UPV0 1460 aa16.35■□□□□ 0.21
NVL-222ENST00000493060 ZNF219Q9P2Y4 722 aaPredicted RBP16.34■□□□□ 0.21
NVL-222ENST00000493060 TOP2AP11388 1531 aaKnown RBP16.34■□□□□ 0.21
NVL-222ENST00000493060 FANCD2Q9BXW9 1451 aa16.32■□□□□ 0.2
NVL-222ENST00000493060 CFTRP13569 1480 aa16.3■□□□□ 0.2
NVL-222ENST00000493060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
NVL-222ENST00000493060 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
NVL-222ENST00000493060 RSF1Q96T23 1441 aaPredicted RBP16.29■□□□□ 0.2
NVL-222ENST00000493060 APLP2Q06481 763 aa16.29■□□□□ 0.2
NVL-222ENST00000493060 POTEHQ6S545 545 aa16.25■□□□□ 0.19
NVL-222ENST00000493060 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
NVL-222ENST00000493060 URB2Q14146 1524 aaKnown RBP16.24■□□□□ 0.19
NVL-222ENST00000493060 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
NVL-222ENST00000493060 TRIM41Q8WV44 630 aa16.11■□□□□ 0.17
NVL-222ENST00000493060 CCDC88BA6NC98 1476 aa16.09■□□□□ 0.17
NVL-222ENST00000493060 RIMBP3CA6NJZ7 1639 aa16.04■□□□□ 0.16
NVL-222ENST00000493060 RIMBP3BA6NNM3 1639 aa16.04■□□□□ 0.16
NVL-222ENST00000493060 RIMBP3Q9UFD9 1639 aa16.04■□□□□ 0.16
NVL-222ENST00000493060 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
NVL-222ENST00000493060 ZNF608Q9ULD9 1512 aaPredicted RBP16.04■□□□□ 0.16
NVL-222ENST00000493060 TOPBP1Q92547 1522 aa16.03■□□□□ 0.16
NVL-222ENST00000493060 CHD1O14646 1710 aa16.02■□□□□ 0.16
NVL-222ENST00000493060 OSCARQ8IYS5 282 aa16.01■□□□□ 0.15
NVL-222ENST00000493060 IFT140Q96RY7 1462 aa16.01■□□□□ 0.15
NVL-222ENST00000493060 DNMBPQ6XZF7 1577 aa16■□□□□ 0.15
NVL-222ENST00000493060 TARBP1Q13395 1621 aaKnown RBP15.99■□□□□ 0.15
NVL-222ENST00000493060 POLA2Q14181 598 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms