RNA–Protein interactions for RNA: ENST00000491045.1

CLASP2-220, Transcript of cytoplasmic linker associated protein 2, humanhuman

TSL 4

Gene CLASP2, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP2-220ENST00000491045 AEBP2Q6ZN18 517 aaPredicted RBP20.94■□□□□ 0.94
CLASP2-220ENST00000491045 CHIC1Q5VXU3 224 aa19.61■□□□□ 0.73
CLASP2-220ENST00000491045 SENP3Q9H4L4 574 aaPredicted RBP17.96■□□□□ 0.47
CLASP2-220ENST00000491045 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
CLASP2-220ENST00000491045 FOXD1Q16676 465 aa16.76■□□□□ 0.27
CLASP2-220ENST00000491045 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
CLASP2-220ENST00000491045 POTEDQ86YR6 584 aa16.09■□□□□ 0.17
CLASP2-220ENST00000491045 MSH5O43196 834 aa15.86■□□□□ 0.13
CLASP2-220ENST00000491045 PIAS4Q8N2W9 510 aaPredicted RBP15.6■□□□□ 0.09
CLASP2-220ENST00000491045 PLPPR3Q6T4P5 718 aa15.47■□□□□ 0.07
CLASP2-220ENST00000491045 PPP6R1Q9UPN7 881 aa15.37■□□□□ 0.05
CLASP2-220ENST00000491045 ADRA2BP18089 450 aa15.31■□□□□ 0.04
CLASP2-220ENST00000491045 CCDC180Q9P1Z9 1646 aa14.4□□□□□ -0.1
CLASP2-220ENST00000491045 MAPK8IP2Q13387 824 aaPredicted RBP14.17□□□□□ -0.14
CLASP2-220ENST00000491045 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
CLASP2-220ENST00000491045 SCAF1Q9H7N4 1312 aaKnown RBP14.05□□□□□ -0.16
CLASP2-220ENST00000491045 CACNB1Q02641 598 aaPredicted RBP13.84□□□□□ -0.19
CLASP2-220ENST00000491045 DCAF8L1A6NGE4 600 aa13.64□□□□□ -0.23
CLASP2-220ENST00000491045 ABCC9O60706 1549 aa13.63□□□□□ -0.23
CLASP2-220ENST00000491045 ZCCHC6Q5VYS8 1495 aaKnown RBP13.56□□□□□ -0.24
CLASP2-220ENST00000491045 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
CLASP2-220ENST00000491045 PPP4R3CPQ6ZMV5 832 aa13.5□□□□□ -0.25
CLASP2-220ENST00000491045 RNF39Q9H2S5 420 aa13.48□□□□□ -0.25
CLASP2-220ENST00000491045 DCAF1Q9Y4B6 1507 aa13.45□□□□□ -0.26
CLASP2-220ENST00000491045 MYO15BQ96JP2 1530 aa13.4□□□□□ -0.26
CLASP2-220ENST00000491045 NACADO15069 1562 aa13.4□□□□□ -0.26
CLASP2-220ENST00000491045 DCAF8L2P0C7V8 631 aa13.39□□□□□ -0.27
CLASP2-220ENST00000491045 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
CLASP2-220ENST00000491045 CNKSR2Q8WXI2 1034 aa13.34□□□□□ -0.27
CLASP2-220ENST00000491045 RNF216Q9NWF9 866 aaPredicted RBP13.31□□□□□ -0.28
CLASP2-220ENST00000491045 C1QBPQ07021 282 aaKnown RBP13.27□□□□□ -0.29
CLASP2-220ENST00000491045 DNAJC5BQ9UF47 199 aa13.11□□□□□ -0.31
CLASP2-220ENST00000491045 SCRIBQ14160 1630 aa13.09□□□□□ -0.31
CLASP2-220ENST00000491045 UNC13AQ9UPW8 1703 aa13.06□□□□□ -0.32
CLASP2-220ENST00000491045 SHROOM4Q9ULL8 1493 aa12.93□□□□□ -0.34
CLASP2-220ENST00000491045 NCBP3Q53F19 620 aaKnown RBP12.89□□□□□ -0.35
CLASP2-220ENST00000491045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.89□□□□□ -0.35
CLASP2-220ENST00000491045 BICRAQ9NZM4 1560 aa12.82□□□□□ -0.36
CLASP2-220ENST00000491045 PABPN1Q86U42 306 aaKnown RBP eCLIP12.71□□□□□ -0.37
CLASP2-220ENST00000491045 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
CLASP2-220ENST00000491045 BAZ1AQ9NRL2 1556 aaPredicted RBP12.6□□□□□ -0.39
CLASP2-220ENST00000491045 U3KPZ7 1027 aaPredicted RBP12.56□□□□□ -0.4
CLASP2-220ENST00000491045 SMARCA4P51532 1647 aa12.55□□□□□ -0.4
CLASP2-220ENST00000491045 POTEHQ6S545 545 aa12.54□□□□□ -0.4
CLASP2-220ENST00000491045 EIF4G1Q04637 1599 aaKnown RBP12.52□□□□□ -0.4
CLASP2-220ENST00000491045 CAPN15O75808 1086 aa12.51□□□□□ -0.41
CLASP2-220ENST00000491045 CECR2Q9BXF3 1484 aa12.49□□□□□ -0.41
CLASP2-220ENST00000491045 DSG3P32926 999 aa12.49□□□□□ -0.41
CLASP2-220ENST00000491045 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
CLASP2-220ENST00000491045 MROH2BQ7Z745 1585 aa12.44□□□□□ -0.42
CLASP2-220ENST00000491045 SMARCA2P51531 1590 aa12.43□□□□□ -0.42
CLASP2-220ENST00000491045 PEG3Q9GZU2 1588 aa12.4□□□□□ -0.42
CLASP2-220ENST00000491045 RSF1Q96T23 1441 aaPredicted RBP12.4□□□□□ -0.42
CLASP2-220ENST00000491045 CC2D2AQ9P2K1 1620 aa12.4□□□□□ -0.42
CLASP2-220ENST00000491045 WIZO95785 1651 aa12.38□□□□□ -0.43
CLASP2-220ENST00000491045 SUPT5HO00267 1087 aaKnown RBP12.34□□□□□ -0.43
CLASP2-220ENST00000491045 HMGXB3Q12766 1538 aa12.32□□□□□ -0.44
CLASP2-220ENST00000491045 BAZ1BQ9UIG0 1483 aaKnown RBP12.32□□□□□ -0.44
CLASP2-220ENST00000491045 ATAD2BQ9ULI0 1458 aa12.32□□□□□ -0.44
CLASP2-220ENST00000491045 TOP2AP11388 1531 aaKnown RBP12.3□□□□□ -0.44
CLASP2-220ENST00000491045 NCAPD3P42695 1498 aa12.27□□□□□ -0.44
CLASP2-220ENST00000491045 TRHP20396 242 aaPredicted RBP12.21□□□□□ -0.45
CLASP2-220ENST00000491045 APLP2Q06481 763 aa12.21□□□□□ -0.45
CLASP2-220ENST00000491045 SLC4A2P04920 1241 aa12.19□□□□□ -0.46
CLASP2-220ENST00000491045 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
CLASP2-220ENST00000491045 ABCB7O75027 752 aa12.18□□□□□ -0.46
CLASP2-220ENST00000491045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.1□□□□□ -0.47
CLASP2-220ENST00000491045 KCNA4P22459 653 aa12.1□□□□□ -0.47
CLASP2-220ENST00000491045 HNRNPUL2Q1KMD3 747 aaKnown RBP12.1□□□□□ -0.47
CLASP2-220ENST00000491045 PRDM2Q13029 1718 aa12.08□□□□□ -0.48
CLASP2-220ENST00000491045 CCDC88BA6NC98 1476 aa12.08□□□□□ -0.48
CLASP2-220ENST00000491045 LAMC3Q9Y6N6 1575 aa12.01□□□□□ -0.49
CLASP2-220ENST00000491045 SAMD1Q6SPF0 538 aaPredicted RBP12.01□□□□□ -0.49
CLASP2-220ENST00000491045 RBM42Q9BTD8 480 aaKnown RBP11.97□□□□□ -0.49
CLASP2-220ENST00000491045 CFTRP13569 1480 aa11.94□□□□□ -0.5
CLASP2-220ENST00000491045 CADPSQ9ULU8 1353 aa11.93□□□□□ -0.5
CLASP2-220ENST00000491045 PDS5BQ9NTI5 1447 aa11.88□□□□□ -0.51
CLASP2-220ENST00000491045 KIF21AQ7Z4S6 1674 aa11.85□□□□□ -0.51
CLASP2-220ENST00000491045 NESP48681 1621 aa11.85□□□□□ -0.51
CLASP2-220ENST00000491045 CEP164Q9UPV0 1460 aa11.84□□□□□ -0.51
CLASP2-220ENST00000491045 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
CLASP2-220ENST00000491045 CHRDL2Q6WN34 429 aa11.83□□□□□ -0.52
CLASP2-220ENST00000491045 ERCC6Q03468 1493 aa11.83□□□□□ -0.52
CLASP2-220ENST00000491045 POLA2Q14181 598 aa11.79□□□□□ -0.52
CLASP2-220ENST00000491045 ABCC8Q09428 1581 aa11.78□□□□□ -0.52
CLASP2-220ENST00000491045 WRNQ14191 1432 aaPredicted RBP eCLIP11.76□□□□□ -0.53
CLASP2-220ENST00000491045 BIVM-ERCC5R4GMW8 1640 aa11.75□□□□□ -0.53
CLASP2-220ENST00000491045 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
CLASP2-220ENST00000491045 DNMBPQ6XZF7 1577 aa11.74□□□□□ -0.53
CLASP2-220ENST00000491045 TOP2BQ02880 1626 aa11.73□□□□□ -0.53
CLASP2-220ENST00000491045 MRC2Q9UBG0 1479 aa11.73□□□□□ -0.53
CLASP2-220ENST00000491045 SYNJ1O43426 1573 aa11.7□□□□□ -0.54
CLASP2-220ENST00000491045 THOC2Q8NI27 1593 aaKnown RBP11.7□□□□□ -0.54
CLASP2-220ENST00000491045 TRIM41Q8WV44 630 aa11.69□□□□□ -0.54
CLASP2-220ENST00000491045 WDR62O43379 1518 aa11.68□□□□□ -0.54
CLASP2-220ENST00000491045 CUX1P39880 1505 aa11.67□□□□□ -0.54
CLASP2-220ENST00000491045 TOPBP1Q92547 1522 aa11.67□□□□□ -0.54
CLASP2-220ENST00000491045 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.55
CLASP2-220ENST00000491045 FGD5Q6ZNL6 1462 aa11.62□□□□□ -0.55
CLASP2-220ENST00000491045 AKT1S1Q96B36 256 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms