RNA–Protein interactions for RNA: ENST00000488351.1

VEGFD-202, Transcript of vascular endothelial growth factor D, humanhuman

TSL 2

Gene VEGFD, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFD-202ENST00000488351 AEBP2Q6ZN18 517 aaPredicted RBP20.18■□□□□ 0.82
VEGFD-202ENST00000488351 CHIC1Q5VXU3 224 aa20.13■□□□□ 0.81
VEGFD-202ENST00000488351 NISCHQ9Y2I1 1504 aa19.17■□□□□ 0.66
VEGFD-202ENST00000488351 PHF23Q9BUL5 403 aaPredicted RBP17.78■□□□□ 0.44
VEGFD-202ENST00000488351 SENP3Q9H4L4 574 aaPredicted RBP17.02■□□□□ 0.32
VEGFD-202ENST00000488351 CCDC180Q9P1Z9 1646 aa16.81■□□□□ 0.28
VEGFD-202ENST00000488351 PLPPR3Q6T4P5 718 aa16.54■□□□□ 0.24
VEGFD-202ENST00000488351 ZCCHC6Q5VYS8 1495 aaKnown RBP16.11■□□□□ 0.17
VEGFD-202ENST00000488351 DCAF1Q9Y4B6 1507 aa15.99■□□□□ 0.15
VEGFD-202ENST00000488351 MYO15BQ96JP2 1530 aa15.83■□□□□ 0.12
VEGFD-202ENST00000488351 FOXD1Q16676 465 aa15.77■□□□□ 0.12
VEGFD-202ENST00000488351 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
VEGFD-202ENST00000488351 ABCC9O60706 1549 aa15.69■□□□□ 0.1
VEGFD-202ENST00000488351 NACADO15069 1562 aa15.66■□□□□ 0.1
VEGFD-202ENST00000488351 ADRA2BP18089 450 aa15.55■□□□□ 0.08
VEGFD-202ENST00000488351 PPP6R1Q9UPN7 881 aa15.55■□□□□ 0.08
VEGFD-202ENST00000488351 RB1CC1Q8TDY2 1594 aa15.51■□□□□ 0.07
VEGFD-202ENST00000488351 SHROOM4Q9ULL8 1493 aa15.44■□□□□ 0.06
VEGFD-202ENST00000488351 SCRIBQ14160 1630 aa15.28■□□□□ 0.04
VEGFD-202ENST00000488351 UNC13AQ9UPW8 1703 aa15.01□□□□□ -0.01
VEGFD-202ENST00000488351 PIAS4Q8N2W9 510 aaPredicted RBP14.95□□□□□ -0.02
VEGFD-202ENST00000488351 SUPT5HO00267 1087 aaKnown RBP14.93□□□□□ -0.02
VEGFD-202ENST00000488351 BICRAQ9NZM4 1560 aa14.88□□□□□ -0.03
VEGFD-202ENST00000488351 BAZ1AQ9NRL2 1556 aaPredicted RBP14.87□□□□□ -0.03
VEGFD-202ENST00000488351 RSF1Q96T23 1441 aaPredicted RBP14.83□□□□□ -0.04
VEGFD-202ENST00000488351 KCNA4P22459 653 aa14.82□□□□□ -0.04
VEGFD-202ENST00000488351 CECR2Q9BXF3 1484 aa14.76□□□□□ -0.05
VEGFD-202ENST00000488351 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
VEGFD-202ENST00000488351 SMARCA4P51532 1647 aa14.72□□□□□ -0.05
VEGFD-202ENST00000488351 MROH2BQ7Z745 1585 aa14.72□□□□□ -0.05
VEGFD-202ENST00000488351 PPP4R3CPQ6ZMV5 832 aa14.65□□□□□ -0.06
VEGFD-202ENST00000488351 PEG3Q9GZU2 1588 aa14.61□□□□□ -0.07
VEGFD-202ENST00000488351 WIZO95785 1651 aa14.58□□□□□ -0.07
VEGFD-202ENST00000488351 SMARCA2P51531 1590 aa14.57□□□□□ -0.08
VEGFD-202ENST00000488351 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
VEGFD-202ENST00000488351 EIF4G1Q04637 1599 aaKnown RBP14.5□□□□□ -0.09
VEGFD-202ENST00000488351 ATAD2BQ9ULI0 1458 aa14.48□□□□□ -0.09
VEGFD-202ENST00000488351 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
VEGFD-202ENST00000488351 HMGXB3Q12766 1538 aa14.42□□□□□ -0.1
VEGFD-202ENST00000488351 NCAPD3P42695 1498 aa14.41□□□□□ -0.1
VEGFD-202ENST00000488351 NCBP3Q53F19 620 aaKnown RBP14.38□□□□□ -0.11
VEGFD-202ENST00000488351 CCDC88BA6NC98 1476 aa14.34□□□□□ -0.11
VEGFD-202ENST00000488351 MSH5O43196 834 aa14.33□□□□□ -0.12
VEGFD-202ENST00000488351 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
VEGFD-202ENST00000488351 CC2D2AQ9P2K1 1620 aa14.25□□□□□ -0.13
VEGFD-202ENST00000488351 SCAF1Q9H7N4 1312 aaKnown RBP14.2□□□□□ -0.14
VEGFD-202ENST00000488351 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
VEGFD-202ENST00000488351 NPM3O75607 178 aaKnown RBP14.18□□□□□ -0.14
VEGFD-202ENST00000488351 TRIM41Q8WV44 630 aa14.16□□□□□ -0.14
VEGFD-202ENST00000488351 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
VEGFD-202ENST00000488351 CFTRP13569 1480 aa14.07□□□□□ -0.16
VEGFD-202ENST00000488351 CADPSQ9ULU8 1353 aa14.03□□□□□ -0.16
VEGFD-202ENST00000488351 WRNQ14191 1432 aaPredicted RBP eCLIP14.02□□□□□ -0.16
VEGFD-202ENST00000488351 PRDM2Q13029 1718 aa14.01□□□□□ -0.17
VEGFD-202ENST00000488351 MAPK8IP2Q13387 824 aaPredicted RBP13.99□□□□□ -0.17
VEGFD-202ENST00000488351 EEA1Q15075 1411 aa13.97□□□□□ -0.17
VEGFD-202ENST00000488351 ABCC8Q09428 1581 aa13.96□□□□□ -0.18
VEGFD-202ENST00000488351 LAMC3Q9Y6N6 1575 aa13.96□□□□□ -0.18
VEGFD-202ENST00000488351 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
VEGFD-202ENST00000488351 TOP2BQ02880 1626 aa13.9□□□□□ -0.18
VEGFD-202ENST00000488351 BIVM-ERCC5R4GMW8 1640 aa13.88□□□□□ -0.19
VEGFD-202ENST00000488351 PDS5BQ9NTI5 1447 aa13.87□□□□□ -0.19
VEGFD-202ENST00000488351 SYNJ1O43426 1573 aa13.85□□□□□ -0.19
VEGFD-202ENST00000488351 POTEDQ86YR6 584 aa13.85□□□□□ -0.19
VEGFD-202ENST00000488351 FANCD2Q9BXW9 1451 aa13.85□□□□□ -0.19
VEGFD-202ENST00000488351 CEP164Q9UPV0 1460 aa13.8□□□□□ -0.2
VEGFD-202ENST00000488351 CUX1P39880 1505 aa13.79□□□□□ -0.2
VEGFD-202ENST00000488351 DNMBPQ6XZF7 1577 aa13.75□□□□□ -0.21
VEGFD-202ENST00000488351 FAM9AQ8IZU1 332 aaPredicted RBP13.74□□□□□ -0.21
VEGFD-202ENST00000488351 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
VEGFD-202ENST00000488351 NESP48681 1621 aa13.73□□□□□ -0.21
VEGFD-202ENST00000488351 SOGA1O94964 1423 aa13.72□□□□□ -0.21
VEGFD-202ENST00000488351 KIF27Q86VH2 1401 aa13.72□□□□□ -0.21
VEGFD-202ENST00000488351 DNAJC5BQ9UF47 199 aa13.71□□□□□ -0.21
VEGFD-202ENST00000488351 TOPBP1Q92547 1522 aa13.68□□□□□ -0.22
VEGFD-202ENST00000488351 LOC105371045A0A1W2PR82 267 aa13.67□□□□□ -0.22
VEGFD-202ENST00000488351 DMRT2Q9Y5R5 561 aa13.67□□□□□ -0.22
VEGFD-202ENST00000488351 GOLGA3Q08378 1498 aa13.67□□□□□ -0.22
VEGFD-202ENST00000488351 KIF21BO75037 1637 aa13.66□□□□□ -0.22
VEGFD-202ENST00000488351 FGD5Q6ZNL6 1462 aa13.66□□□□□ -0.22
VEGFD-202ENST00000488351 ZBTB22O15209 634 aa13.65□□□□□ -0.22
VEGFD-202ENST00000488351 MRC2Q9UBG0 1479 aa13.63□□□□□ -0.23
VEGFD-202ENST00000488351 KIF21AQ7Z4S6 1674 aa13.62□□□□□ -0.23
VEGFD-202ENST00000488351 TNIKQ9UKE5 1360 aa13.61□□□□□ -0.23
VEGFD-202ENST00000488351 URB2Q14146 1524 aaKnown RBP13.61□□□□□ -0.23
VEGFD-202ENST00000488351 ERICH3Q5RHP9 1530 aa13.61□□□□□ -0.23
VEGFD-202ENST00000488351 RUSC2Q8N2Y8 1516 aa13.6□□□□□ -0.23
VEGFD-202ENST00000488351 ABCA10Q8WWZ4 1543 aa13.6□□□□□ -0.23
VEGFD-202ENST00000488351 POLA1P09884 1462 aaPredicted RBP13.6□□□□□ -0.23
VEGFD-202ENST00000488351 CUX2O14529 1486 aa13.59□□□□□ -0.23
VEGFD-202ENST00000488351 ERCC6Q03468 1493 aa13.57□□□□□ -0.24
VEGFD-202ENST00000488351 HOXD11P31277 338 aaPredicted RBP13.57□□□□□ -0.24
VEGFD-202ENST00000488351 PRXQ9BXM0 1461 aa13.56□□□□□ -0.24
VEGFD-202ENST00000488351 WDR97A6NE52 1622 aa13.55□□□□□ -0.24
VEGFD-202ENST00000488351 UBTFP17480 764 aaKnown RBP13.55□□□□□ -0.24
VEGFD-202ENST00000488351 WDR62O43379 1518 aa13.54□□□□□ -0.24
VEGFD-202ENST00000488351 CUL7Q14999 1698 aa13.5□□□□□ -0.25
VEGFD-202ENST00000488351 IFT140Q96RY7 1462 aa13.5□□□□□ -0.25
VEGFD-202ENST00000488351 IGF1RP08069 1367 aa13.5□□□□□ -0.25
VEGFD-202ENST00000488351 CEP162Q5TB80 1403 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms