RNA–Protein interactions for RNA: ENST00000488263.5

CRBN-209, Transcript of cereblon, humanhuman

TSL 1 (best)

Gene CRBN, Length 4,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRBN-209ENST00000488263 NISCHQ9Y2I1 1504 aa10.84□□□□□ -0.67
CRBN-209ENST00000488263 DCAF8L2P0C7V8 631 aa9.52□□□□□ -0.88
CRBN-209ENST00000488263 CCDC180Q9P1Z9 1646 aa9.29□□□□□ -0.92
CRBN-209ENST00000488263 ZCCHC6Q5VYS8 1495 aaKnown RBP9.25□□□□□ -0.93
CRBN-209ENST00000488263 AEBP2Q6ZN18 517 aaPredicted RBP9.1□□□□□ -0.95
CRBN-209ENST00000488263 MYT1Q01538 1121 aa9.07□□□□□ -0.96
CRBN-209ENST00000488263 MYO15BQ96JP2 1530 aa9.02□□□□□ -0.97
CRBN-209ENST00000488263 DCAF1Q9Y4B6 1507 aa9□□□□□ -0.97
CRBN-209ENST00000488263 PELP1Q8IZL8 1130 aaKnown RBP8.97□□□□□ -0.97
CRBN-209ENST00000488263 SHROOM4Q9ULL8 1493 aa8.95□□□□□ -0.98
CRBN-209ENST00000488263 HRCP23327 699 aa8.9□□□□□ -0.98
CRBN-209ENST00000488263 TRIM41Q8WV44 630 aa8.88□□□□□ -0.99
CRBN-209ENST00000488263 SUPT5HO00267 1087 aaKnown RBP8.88□□□□□ -0.99
CRBN-209ENST00000488263 PPARGC1BQ86YN6 1023 aaKnown RBP8.87□□□□□ -0.99
CRBN-209ENST00000488263 SLC24A1O60721 1099 aa8.86□□□□□ -0.99
CRBN-209ENST00000488263 ABCC9O60706 1549 aa8.86□□□□□ -0.99
CRBN-209ENST00000488263 TTBK1Q5TCY1 1321 aaPredicted RBP8.81□□□□□ -1
CRBN-209ENST00000488263 PCGF6Q9BYE7 350 aa8.78□□□□□ -1
CRBN-209ENST00000488263 CHIC1Q5VXU3 224 aa8.75□□□□□ -1.01
CRBN-209ENST00000488263 TRHP20396 242 aaPredicted RBP8.66□□□□□ -1.02
CRBN-209ENST00000488263 EIF4G1Q04637 1599 aaKnown RBP8.63□□□□□ -1.03
CRBN-209ENST00000488263 LOC105371045A0A1W2PR82 267 aa8.61□□□□□ -1.03
CRBN-209ENST00000488263 PABPN1Q86U42 306 aaKnown RBP eCLIP8.61□□□□□ -1.03
CRBN-209ENST00000488263 RB1CC1Q8TDY2 1594 aa8.59□□□□□ -1.04
CRBN-209ENST00000488263 RSF1Q96T23 1441 aaPredicted RBP8.57□□□□□ -1.04
CRBN-209ENST00000488263 SCRIBQ14160 1630 aa8.53□□□□□ -1.04
CRBN-209ENST00000488263 ERICH6Q7L0X2 663 aa8.51□□□□□ -1.05
CRBN-209ENST00000488263 SCAF1Q9H7N4 1312 aaKnown RBP8.48□□□□□ -1.05
CRBN-209ENST00000488263 UNC13AQ9UPW8 1703 aa8.47□□□□□ -1.05
CRBN-209ENST00000488263 DNAJC5Q9H3Z4 198 aa8.47□□□□□ -1.05
CRBN-209ENST00000488263 MROH2BQ7Z745 1585 aa8.45□□□□□ -1.06
CRBN-209ENST00000488263 WIZO95785 1651 aa8.45□□□□□ -1.06
CRBN-209ENST00000488263 CECR2Q9BXF3 1484 aa8.44□□□□□ -1.06
CRBN-209ENST00000488263 NACADO15069 1562 aa8.43□□□□□ -1.06
CRBN-209ENST00000488263 TRIM26Q12899 539 aaPredicted RBP8.42□□□□□ -1.06
CRBN-209ENST00000488263 BAZ1AQ9NRL2 1556 aaPredicted RBP8.41□□□□□ -1.06
CRBN-209ENST00000488263 FAM9AQ8IZU1 332 aaPredicted RBP8.37□□□□□ -1.07
CRBN-209ENST00000488263 DAXXQ9UER7 740 aaPredicted RBP8.3□□□□□ -1.08
CRBN-209ENST00000488263 SMARCA2P51531 1590 aa8.28□□□□□ -1.08
CRBN-209ENST00000488263 SMARCA4P51532 1647 aa8.27□□□□□ -1.09
CRBN-209ENST00000488263 DNAJC5BQ9UF47 199 aa8.27□□□□□ -1.09
CRBN-209ENST00000488263 PRKCSHP14314 528 aaPredicted RBP8.27□□□□□ -1.09
CRBN-209ENST00000488263 BICRAQ9NZM4 1560 aa8.26□□□□□ -1.09
CRBN-209ENST00000488263 TOP2AP11388 1531 aaKnown RBP8.25□□□□□ -1.09
CRBN-209ENST00000488263 NEUROD1Q13562 356 aa8.25□□□□□ -1.09
CRBN-209ENST00000488263 EHMT2Q96KQ7 1210 aa8.25□□□□□ -1.09
CRBN-209ENST00000488263 FBLN2P98095 1184 aa8.24□□□□□ -1.09
CRBN-209ENST00000488263 PEG3Q9GZU2 1588 aa8.24□□□□□ -1.09
CRBN-209ENST00000488263 APLP2Q06481 763 aa8.22□□□□□ -1.09
CRBN-209ENST00000488263 ZEB1P37275 1124 aaPredicted RBP8.21□□□□□ -1.09
CRBN-209ENST00000488263 ABCC8Q09428 1581 aa8.2□□□□□ -1.1
CRBN-209ENST00000488263 ERCC6Q03468 1493 aa8.2□□□□□ -1.1
CRBN-209ENST00000488263 ACIN1Q9UKV3 1341 aaKnown RBP8.19□□□□□ -1.1
CRBN-209ENST00000488263 CCDC88BA6NC98 1476 aa8.18□□□□□ -1.1
CRBN-209ENST00000488263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.17□□□□□ -1.1
CRBN-209ENST00000488263 WRNQ14191 1432 aaPredicted RBP eCLIP8.17□□□□□ -1.1
CRBN-209ENST00000488263 NPM1P06748 294 aaKnown RBP eCLIP8.16□□□□□ -1.1
CRBN-209ENST00000488263 GTF3C3Q9Y5Q9 886 aa8.15□□□□□ -1.1
CRBN-209ENST00000488263 RUSC2Q8N2Y8 1516 aa8.13□□□□□ -1.11
CRBN-209ENST00000488263 SYNJ1O43426 1573 aa8.1□□□□□ -1.11
CRBN-209ENST00000488263 SOGA1O94964 1423 aa8.08□□□□□ -1.12
CRBN-209ENST00000488263 DIEXFQ68CQ4 756 aaKnown RBP8.06□□□□□ -1.12
CRBN-209ENST00000488263 KIF21BO75037 1637 aa8.06□□□□□ -1.12
CRBN-209ENST00000488263 OSCARQ8IYS5 282 aa8.04□□□□□ -1.12
CRBN-209ENST00000488263 CCER1Q8TC90 406 aaPredicted RBP8.04□□□□□ -1.12
CRBN-209ENST00000488263 CYB5RLQ6IPT4 315 aa8.03□□□□□ -1.12
CRBN-209ENST00000488263 BIVM-ERCC5R4GMW8 1640 aa8.03□□□□□ -1.12
CRBN-209ENST00000488263 MYT1LQ9UL68 1186 aa8.02□□□□□ -1.12
CRBN-209ENST00000488263 CEP162Q5TB80 1403 aa8.01□□□□□ -1.13
CRBN-209ENST00000488263 PLPPR3Q6T4P5 718 aa8.01□□□□□ -1.13
CRBN-209ENST00000488263 TNIKQ9UKE5 1360 aa8□□□□□ -1.13
CRBN-209ENST00000488263 TOP2BQ02880 1626 aa7.97□□□□□ -1.13
CRBN-209ENST00000488263 YTHDC1Q96MU7 727 aaKnown RBP7.97□□□□□ -1.13
CRBN-209ENST00000488263 ATAD2BQ9ULI0 1458 aa7.95□□□□□ -1.14
CRBN-209ENST00000488263 EEA1Q15075 1411 aa7.95□□□□□ -1.14
CRBN-209ENST00000488263 CENPBP07199 599 aaPredicted RBP7.94□□□□□ -1.14
CRBN-209ENST00000488263 MIER1Q8N108 512 aa7.94□□□□□ -1.14
CRBN-209ENST00000488263 PRDM2Q13029 1718 aa7.93□□□□□ -1.14
CRBN-209ENST00000488263 EIF5BO60841 1220 aaKnown RBP7.91□□□□□ -1.14
CRBN-209ENST00000488263 GOLGA3Q08378 1498 aa7.9□□□□□ -1.14
CRBN-209ENST00000488263 PHF23Q9BUL5 403 aaPredicted RBP7.9□□□□□ -1.14
CRBN-209ENST00000488263 BAZ1BQ9UIG0 1483 aaKnown RBP7.9□□□□□ -1.14
CRBN-209ENST00000488263 ZNF316A6NFI3 1004 aaPredicted RBP7.9□□□□□ -1.15
CRBN-209ENST00000488263 RAPGEF2Q9Y4G8 1499 aa7.89□□□□□ -1.15
CRBN-209ENST00000488263 ESF1Q9H501 851 aaKnown RBP7.88□□□□□ -1.15
CRBN-209ENST00000488263 PRXQ9BXM0 1461 aa7.88□□□□□ -1.15
CRBN-209ENST00000488263 CLIP1P30622 1438 aa7.87□□□□□ -1.15
CRBN-209ENST00000488263 RANGAP1P46060 587 aaPredicted RBP7.87□□□□□ -1.15
CRBN-209ENST00000488263 CHMP7Q8WUX9 453 aaPredicted RBP7.87□□□□□ -1.15
CRBN-209ENST00000488263 ARAP1Q96P48 1450 aa7.87□□□□□ -1.15
CRBN-209ENST00000488263 ERICH3Q5RHP9 1530 aa7.87□□□□□ -1.15
CRBN-209ENST00000488263 CUX1P39880 1505 aa7.86□□□□□ -1.15
CRBN-209ENST00000488263 HMGXB3Q12766 1538 aa7.86□□□□□ -1.15
CRBN-209ENST00000488263 NCBP3Q53F19 620 aaKnown RBP7.86□□□□□ -1.15
CRBN-209ENST00000488263 CEP164Q9UPV0 1460 aa7.86□□□□□ -1.15
CRBN-209ENST00000488263 FOXD1Q16676 465 aa7.85□□□□□ -1.15
CRBN-209ENST00000488263 BCL11AQ9H165 835 aa7.85□□□□□ -1.15
CRBN-209ENST00000488263 CUX2O14529 1486 aa7.84□□□□□ -1.15
CRBN-209ENST00000488263 VPS8Q8N3P4 1428 aa7.84□□□□□ -1.15
CRBN-209ENST00000488263 DCAF8L1A6NGE4 600 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms