RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 NISCHQ9Y2I1 1504 aa5.47□□□□□ -1.53
C9orf72-205ENST00000488117 CHIC1Q5VXU3 224 aa4.76□□□□□ -1.65
C9orf72-205ENST00000488117 CCDC180Q9P1Z9 1646 aa4.73□□□□□ -1.65
C9orf72-205ENST00000488117 SHROOM4Q9ULL8 1493 aa4.62□□□□□ -1.67
C9orf72-205ENST00000488117 DCAF8L2P0C7V8 631 aa4.62□□□□□ -1.67
C9orf72-205ENST00000488117 ZCCHC6Q5VYS8 1495 aaKnown RBP4.62□□□□□ -1.67
C9orf72-205ENST00000488117 POTEDQ86YR6 584 aa4.57□□□□□ -1.68
C9orf72-205ENST00000488117 SUPT5HO00267 1087 aaKnown RBP4.54□□□□□ -1.68
C9orf72-205ENST00000488117 DCAF1Q9Y4B6 1507 aa4.52□□□□□ -1.69
C9orf72-205ENST00000488117 MYO15BQ96JP2 1530 aa4.41□□□□□ -1.7
C9orf72-205ENST00000488117 AEBP2Q6ZN18 517 aaPredicted RBP4.4□□□□□ -1.7
C9orf72-205ENST00000488117 NACADO15069 1562 aa4.39□□□□□ -1.71
C9orf72-205ENST00000488117 SCRIBQ14160 1630 aa4.39□□□□□ -1.71
C9orf72-205ENST00000488117 ABCC9O60706 1549 aa4.39□□□□□ -1.71
C9orf72-205ENST00000488117 RB1CC1Q8TDY2 1594 aa4.35□□□□□ -1.71
C9orf72-205ENST00000488117 SENP3Q9H4L4 574 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-205ENST00000488117 RSF1Q96T23 1441 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-205ENST00000488117 TRIM41Q8WV44 630 aa4.27□□□□□ -1.73
C9orf72-205ENST00000488117 BAZ1AQ9NRL2 1556 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-205ENST00000488117 UNC13AQ9UPW8 1703 aa4.22□□□□□ -1.73
C9orf72-205ENST00000488117 CECR2Q9BXF3 1484 aa4.22□□□□□ -1.73
C9orf72-205ENST00000488117 MROH2BQ7Z745 1585 aa4.22□□□□□ -1.73
C9orf72-205ENST00000488117 WIZO95785 1651 aa4.2□□□□□ -1.74
C9orf72-205ENST00000488117 FAM9AQ8IZU1 332 aaPredicted RBP4.19□□□□□ -1.74
C9orf72-205ENST00000488117 TOP2AP11388 1531 aaKnown RBP4.19□□□□□ -1.74
C9orf72-205ENST00000488117 PCGF6Q9BYE7 350 aa4.19□□□□□ -1.74
C9orf72-205ENST00000488117 SMARCA4P51532 1647 aa4.19□□□□□ -1.74
C9orf72-205ENST00000488117 LOC105371045A0A1W2PR82 267 aa4.19□□□□□ -1.74
C9orf72-205ENST00000488117 PABPN1Q86U42 306 aaKnown RBP eCLIP4.17□□□□□ -1.74
C9orf72-205ENST00000488117 TRIM26Q12899 539 aaPredicted RBP4.17□□□□□ -1.74
C9orf72-205ENST00000488117 HRCP23327 699 aa4.15□□□□□ -1.74
C9orf72-205ENST00000488117 EHMT2Q96KQ7 1210 aa4.15□□□□□ -1.75
C9orf72-205ENST00000488117 ZEB1P37275 1124 aaPredicted RBP4.14□□□□□ -1.75
C9orf72-205ENST00000488117 CCDC88BA6NC98 1476 aa4.13□□□□□ -1.75
C9orf72-205ENST00000488117 SMARCA2P51531 1590 aa4.13□□□□□ -1.75
C9orf72-205ENST00000488117 BAZ1BQ9UIG0 1483 aaKnown RBP4.12□□□□□ -1.75
C9orf72-205ENST00000488117 EEA1Q15075 1411 aa4.12□□□□□ -1.75
C9orf72-205ENST00000488117 BICRAQ9NZM4 1560 aa4.11□□□□□ -1.75
C9orf72-205ENST00000488117 PEG3Q9GZU2 1588 aa4.1□□□□□ -1.75
C9orf72-205ENST00000488117 UBTFP17480 764 aaKnown RBP4.09□□□□□ -1.75
C9orf72-205ENST00000488117 EIF4G1Q04637 1599 aaKnown RBP4.09□□□□□ -1.76
C9orf72-205ENST00000488117 ABCC8Q09428 1581 aa4.09□□□□□ -1.76
C9orf72-205ENST00000488117 ATAD2BQ9ULI0 1458 aa4.08□□□□□ -1.76
C9orf72-205ENST00000488117 WRNQ14191 1432 aaPredicted RBP eCLIP4.08□□□□□ -1.76
C9orf72-205ENST00000488117 PHF23Q9BUL5 403 aaPredicted RBP4.08□□□□□ -1.76
C9orf72-205ENST00000488117 APLP2Q06481 763 aa4.08□□□□□ -1.76
C9orf72-205ENST00000488117 CSRNP3Q8WYN3 585 aa4.07□□□□□ -1.76
C9orf72-205ENST00000488117 GOLGA3Q08378 1498 aa4.07□□□□□ -1.76
C9orf72-205ENST00000488117 TNIKQ9UKE5 1360 aa4.06□□□□□ -1.76
C9orf72-205ENST00000488117 CEP164Q9UPV0 1460 aa4.05□□□□□ -1.76
C9orf72-205ENST00000488117 HMGXB3Q12766 1538 aa4.05□□□□□ -1.76
C9orf72-205ENST00000488117 CEP162Q5TB80 1403 aa4.04□□□□□ -1.76
C9orf72-205ENST00000488117 SOGA1O94964 1423 aa4.03□□□□□ -1.76
C9orf72-205ENST00000488117 NCAPD3P42695 1498 aa4.03□□□□□ -1.76
C9orf72-205ENST00000488117 CCER1Q8TC90 406 aaPredicted RBP4.02□□□□□ -1.77
C9orf72-205ENST00000488117 PPARGC1BQ86YN6 1023 aaKnown RBP4.02□□□□□ -1.77
C9orf72-205ENST00000488117 KIF21BO75037 1637 aa4.01□□□□□ -1.77
C9orf72-205ENST00000488117 TTBK1Q5TCY1 1321 aaPredicted RBP4.01□□□□□ -1.77
C9orf72-205ENST00000488117 SYNJ1O43426 1573 aa4.01□□□□□ -1.77
C9orf72-205ENST00000488117 CLIP1P30622 1438 aa4□□□□□ -1.77
C9orf72-205ENST00000488117 TOP2BQ02880 1626 aa4□□□□□ -1.77
C9orf72-205ENST00000488117 KIF27Q86VH2 1401 aa3.99□□□□□ -1.77
C9orf72-205ENST00000488117 RANGAP1P46060 587 aaPredicted RBP3.99□□□□□ -1.77
C9orf72-205ENST00000488117 BIVM-ERCC5R4GMW8 1640 aa3.98□□□□□ -1.77
C9orf72-205ENST00000488117 RUSC2Q8N2Y8 1516 aa3.98□□□□□ -1.77
C9orf72-205ENST00000488117 CFTRP13569 1480 aa3.97□□□□□ -1.77
C9orf72-205ENST00000488117 ERICH3Q5RHP9 1530 aa3.97□□□□□ -1.77
C9orf72-205ENST00000488117 VPS8Q8N3P4 1428 aa3.96□□□□□ -1.77
C9orf72-205ENST00000488117 CADPSQ9ULU8 1353 aa3.96□□□□□ -1.78
C9orf72-205ENST00000488117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.96□□□□□ -1.78
C9orf72-205ENST00000488117 PRDM2Q13029 1718 aa3.96□□□□□ -1.78
C9orf72-205ENST00000488117 RAPGEF2Q9Y4G8 1499 aa3.95□□□□□ -1.78
C9orf72-205ENST00000488117 CC2D2AQ9P2K1 1620 aa3.95□□□□□ -1.78
C9orf72-205ENST00000488117 CUX1P39880 1505 aa3.95□□□□□ -1.78
C9orf72-205ENST00000488117 CUX2O14529 1486 aa3.94□□□□□ -1.78
C9orf72-205ENST00000488117 HNRNPUL2Q1KMD3 747 aaKnown RBP3.93□□□□□ -1.78
C9orf72-205ENST00000488117 PRXQ9BXM0 1461 aa3.92□□□□□ -1.78
C9orf72-205ENST00000488117 FANCD2Q9BXW9 1451 aa3.92□□□□□ -1.78
C9orf72-205ENST00000488117 FGD5Q6ZNL6 1462 aa3.92□□□□□ -1.78
C9orf72-205ENST00000488117 CARMIL1Q5VZK9 1371 aa3.91□□□□□ -1.78
C9orf72-205ENST00000488117 ATP1B4Q9UN42 357 aaPredicted RBP3.91□□□□□ -1.78
C9orf72-205ENST00000488117 DNMBPQ6XZF7 1577 aa3.91□□□□□ -1.78
C9orf72-205ENST00000488117 PDS5BQ9NTI5 1447 aa3.91□□□□□ -1.78
C9orf72-205ENST00000488117 CENPBP07199 599 aaPredicted RBP3.9□□□□□ -1.79
C9orf72-205ENST00000488117 FHAD1B1AJZ9 1412 aa3.9□□□□□ -1.79
C9orf72-205ENST00000488117 LAMC3Q9Y6N6 1575 aa3.9□□□□□ -1.79
C9orf72-205ENST00000488117 ARAP1Q96P48 1450 aa3.89□□□□□ -1.79
C9orf72-205ENST00000488117 DIEXFQ68CQ4 756 aaKnown RBP3.88□□□□□ -1.79
C9orf72-205ENST00000488117 IGF1RP08069 1367 aa3.88□□□□□ -1.79
C9orf72-205ENST00000488117 CUL7Q14999 1698 aa3.88□□□□□ -1.79
C9orf72-205ENST00000488117 ZNF316A6NFI3 1004 aaPredicted RBP3.88□□□□□ -1.79
C9orf72-205ENST00000488117 TOPBP1Q92547 1522 aa3.88□□□□□ -1.79
C9orf72-205ENST00000488117 MSH5O43196 834 aa3.87□□□□□ -1.79
C9orf72-205ENST00000488117 CLSPNQ9HAW4 1339 aa3.87□□□□□ -1.79
C9orf72-205ENST00000488117 ABCA10Q8WWZ4 1543 aa3.87□□□□□ -1.79
C9orf72-205ENST00000488117 EFCAB5A4FU69 1503 aa3.87□□□□□ -1.79
C9orf72-205ENST00000488117 ARHGAP35Q9NRY4 1499 aa3.87□□□□□ -1.79
C9orf72-205ENST00000488117 ITGAEP38570 1179 aa3.87□□□□□ -1.79
C9orf72-205ENST00000488117 CCNB3Q8WWL7 1395 aa3.86□□□□□ -1.79
C9orf72-205ENST00000488117 FAM50AQ14320 339 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms