RNA–Protein interactions for RNA: ENST00000487728.1

KCNK1-206, Transcript of potassium two pore domain channel subfamily K member 1, humanhuman

TSL 3

Gene KCNK1, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNK1-206ENST00000487728 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
KCNK1-206ENST00000487728 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.48
KCNK1-206ENST00000487728 SENP3Q9H4L4 574 aaPredicted RBP16.02■□□□□ 0.16
KCNK1-206ENST00000487728 PHF23Q9BUL5 403 aaPredicted RBP15.83■□□□□ 0.12
KCNK1-206ENST00000487728 NISCHQ9Y2I1 1504 aa14.92□□□□□ -0.02
KCNK1-206ENST00000487728 FOXD1Q16676 465 aa14.87□□□□□ -0.03
KCNK1-206ENST00000487728 PLPPR3Q6T4P5 718 aa14.58□□□□□ -0.08
KCNK1-206ENST00000487728 ABCC9O60706 1549 aa14.11□□□□□ -0.15
KCNK1-206ENST00000487728 PPP6R1Q9UPN7 881 aa14.07□□□□□ -0.16
KCNK1-206ENST00000487728 ADRA2BP18089 450 aa14.06□□□□□ -0.16
KCNK1-206ENST00000487728 PIAS4Q8N2W9 510 aaPredicted RBP13.99□□□□□ -0.17
KCNK1-206ENST00000487728 MSH5O43196 834 aa13.86□□□□□ -0.19
KCNK1-206ENST00000487728 DNAJC5BQ9UF47 199 aa13.72□□□□□ -0.21
KCNK1-206ENST00000487728 CCDC180Q9P1Z9 1646 aa13.61□□□□□ -0.23
KCNK1-206ENST00000487728 RB1CC1Q8TDY2 1594 aa13.2□□□□□ -0.3
KCNK1-206ENST00000487728 POTEDQ86YR6 584 aa13.09□□□□□ -0.31
KCNK1-206ENST00000487728 PABPN1Q86U42 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
KCNK1-206ENST00000487728 NACADO15069 1562 aa12.98□□□□□ -0.33
KCNK1-206ENST00000487728 UNC13AQ9UPW8 1703 aa12.97□□□□□ -0.33
KCNK1-206ENST00000487728 DNAJC5Q9H3Z4 198 aa12.94□□□□□ -0.34
KCNK1-206ENST00000487728 SCAF1Q9H7N4 1312 aaKnown RBP12.91□□□□□ -0.34
KCNK1-206ENST00000487728 BICRAQ9NZM4 1560 aa12.86□□□□□ -0.35
KCNK1-206ENST00000487728 DCAF8L2P0C7V8 631 aa12.84□□□□□ -0.35
KCNK1-206ENST00000487728 MAPK8IP2Q13387 824 aaPredicted RBP12.84□□□□□ -0.35
KCNK1-206ENST00000487728 PPP4R3CPQ6ZMV5 832 aa12.8□□□□□ -0.36
KCNK1-206ENST00000487728 CECR2Q9BXF3 1484 aa12.75□□□□□ -0.37
KCNK1-206ENST00000487728 CC2D2AQ9P2K1 1620 aa12.73□□□□□ -0.37
KCNK1-206ENST00000487728 DMRT2Q9Y5R5 561 aa12.72□□□□□ -0.37
KCNK1-206ENST00000487728 MYO15BQ96JP2 1530 aa12.61□□□□□ -0.39
KCNK1-206ENST00000487728 EIF4G1Q04637 1599 aaKnown RBP12.56□□□□□ -0.4
KCNK1-206ENST00000487728 SHROOM4Q9ULL8 1493 aa12.55□□□□□ -0.4
KCNK1-206ENST00000487728 CNKSR2Q8WXI2 1034 aa12.51□□□□□ -0.41
KCNK1-206ENST00000487728 NCBP3Q53F19 620 aaKnown RBP12.42□□□□□ -0.42
KCNK1-206ENST00000487728 SCRIBQ14160 1630 aa12.38□□□□□ -0.43
KCNK1-206ENST00000487728 HOXD11P31277 338 aaPredicted RBP12.34□□□□□ -0.43
KCNK1-206ENST00000487728 CUX2O14529 1486 aa12.34□□□□□ -0.43
KCNK1-206ENST00000487728 RNF216Q9NWF9 866 aaPredicted RBP12.32□□□□□ -0.44
KCNK1-206ENST00000487728 DCAF1Q9Y4B6 1507 aa12.27□□□□□ -0.44
KCNK1-206ENST00000487728 DCAF8L1A6NGE4 600 aa12.26□□□□□ -0.45
KCNK1-206ENST00000487728 ZCCHC6Q5VYS8 1495 aaKnown RBP12.25□□□□□ -0.45
KCNK1-206ENST00000487728 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
KCNK1-206ENST00000487728 ERCC6Q03468 1493 aa12.19□□□□□ -0.46
KCNK1-206ENST00000487728 KCNA4P22459 653 aa12.18□□□□□ -0.46
KCNK1-206ENST00000487728 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
KCNK1-206ENST00000487728 NESP48681 1621 aa12□□□□□ -0.49
KCNK1-206ENST00000487728 NCAPD3P42695 1498 aa11.99□□□□□ -0.49
KCNK1-206ENST00000487728 THOC2Q8NI27 1593 aaKnown RBP11.96□□□□□ -0.5
KCNK1-206ENST00000487728 ATAD2BQ9ULI0 1458 aa11.89□□□□□ -0.51
KCNK1-206ENST00000487728 SMARCA2P51531 1590 aa11.84□□□□□ -0.51
KCNK1-206ENST00000487728 HMGXB3Q12766 1538 aa11.84□□□□□ -0.51
KCNK1-206ENST00000487728 KIF21AQ7Z4S6 1674 aa11.84□□□□□ -0.51
KCNK1-206ENST00000487728 RNF39Q9H2S5 420 aa11.82□□□□□ -0.52
KCNK1-206ENST00000487728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.81□□□□□ -0.52
KCNK1-206ENST00000487728 LAMC3Q9Y6N6 1575 aa11.8□□□□□ -0.52
KCNK1-206ENST00000487728 CACNB1Q02641 598 aaPredicted RBP11.76□□□□□ -0.53
KCNK1-206ENST00000487728 SMARCA4P51532 1647 aa11.75□□□□□ -0.53
KCNK1-206ENST00000487728 BAZ1AQ9NRL2 1556 aaPredicted RBP11.75□□□□□ -0.53
KCNK1-206ENST00000487728 PDS5BQ9NTI5 1447 aa11.73□□□□□ -0.53
KCNK1-206ENST00000487728 BAZ1BQ9UIG0 1483 aaKnown RBP11.73□□□□□ -0.53
KCNK1-206ENST00000487728 OSCARQ8IYS5 282 aa11.71□□□□□ -0.53
KCNK1-206ENST00000487728 C1QBPQ07021 282 aaKnown RBP11.68□□□□□ -0.54
KCNK1-206ENST00000487728 MRC2Q9UBG0 1479 aa11.67□□□□□ -0.54
KCNK1-206ENST00000487728 WDR62O43379 1518 aa11.66□□□□□ -0.54
KCNK1-206ENST00000487728 RIMBP3CA6NJZ7 1639 aa11.64□□□□□ -0.55
KCNK1-206ENST00000487728 RIMBP3BA6NNM3 1639 aa11.64□□□□□ -0.55
KCNK1-206ENST00000487728 RIMBP3Q9UFD9 1639 aa11.64□□□□□ -0.55
KCNK1-206ENST00000487728 PEG3Q9GZU2 1588 aa11.63□□□□□ -0.55
KCNK1-206ENST00000487728 CADPSQ9ULU8 1353 aa11.6□□□□□ -0.55
KCNK1-206ENST00000487728 SLC4A2P04920 1241 aa11.57□□□□□ -0.56
KCNK1-206ENST00000487728 SLC4A1APQ9BWU0 796 aaKnown RBP11.57□□□□□ -0.56
KCNK1-206ENST00000487728 U3KPZ7 1027 aaPredicted RBP11.55□□□□□ -0.56
KCNK1-206ENST00000487728 ARHGEF11O15085 1522 aa11.53□□□□□ -0.56
KCNK1-206ENST00000487728 CEP164Q9UPV0 1460 aa11.52□□□□□ -0.56
KCNK1-206ENST00000487728 TRHP20396 242 aaPredicted RBP11.52□□□□□ -0.57
KCNK1-206ENST00000487728 MROH2BQ7Z745 1585 aa11.51□□□□□ -0.57
KCNK1-206ENST00000487728 CYB5RLQ6IPT4 315 aa11.49□□□□□ -0.57
KCNK1-206ENST00000487728 FANCD2Q9BXW9 1451 aa11.47□□□□□ -0.57
KCNK1-206ENST00000487728 URB2Q14146 1524 aaKnown RBP11.42□□□□□ -0.58
KCNK1-206ENST00000487728 ARAP1Q96P48 1450 aa11.38□□□□□ -0.59
KCNK1-206ENST00000487728 WIZO95785 1651 aa11.37□□□□□ -0.59
KCNK1-206ENST00000487728 ZNF608Q9ULD9 1512 aaPredicted RBP11.37□□□□□ -0.59
KCNK1-206ENST00000487728 CFTRP13569 1480 aa11.36□□□□□ -0.59
KCNK1-206ENST00000487728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.35□□□□□ -0.59
KCNK1-206ENST00000487728 HNRNPUL2Q1KMD3 747 aaKnown RBP11.35□□□□□ -0.59
KCNK1-206ENST00000487728 CAPN15O75808 1086 aa11.32□□□□□ -0.6
KCNK1-206ENST00000487728 SPINK5Q9NQ38 1064 aaPredicted RBP11.32□□□□□ -0.6
KCNK1-206ENST00000487728 CHD1O14646 1710 aa11.32□□□□□ -0.6
KCNK1-206ENST00000487728 APLP2Q06481 763 aa11.31□□□□□ -0.6
KCNK1-206ENST00000487728 FOXD4L1Q9NU39 408 aa11.31□□□□□ -0.6
KCNK1-206ENST00000487728 IFT140Q96RY7 1462 aa11.31□□□□□ -0.6
KCNK1-206ENST00000487728 MYCNP04198 464 aaPredicted RBP11.3□□□□□ -0.6
KCNK1-206ENST00000487728 SAMD1Q6SPF0 538 aaPredicted RBP11.29□□□□□ -0.6
KCNK1-206ENST00000487728 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
KCNK1-206ENST00000487728 RSF1Q96T23 1441 aaPredicted RBP11.26□□□□□ -0.61
KCNK1-206ENST00000487728 PRDM2Q13029 1718 aa11.24□□□□□ -0.61
KCNK1-206ENST00000487728 FBLN2P98095 1184 aa11.23□□□□□ -0.61
KCNK1-206ENST00000487728 TOPBP1Q92547 1522 aa11.2□□□□□ -0.62
KCNK1-206ENST00000487728 AQRO60306 1485 aaKnown RBP eCLIP11.2□□□□□ -0.62
KCNK1-206ENST00000487728 ZBTB22O15209 634 aa11.19□□□□□ -0.62
KCNK1-206ENST00000487728 ZNF219Q9P2Y4 722 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms