RNA–Protein interactions for RNA: ENST00000487575.6

CBWD1-215, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-215ENST00000487575 AEBP2Q6ZN18 517 aaPredicted RBP17.64■□□□□ 0.41
CBWD1-215ENST00000487575 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
CBWD1-215ENST00000487575 NISCHQ9Y2I1 1504 aa15.95■□□□□ 0.14
CBWD1-215ENST00000487575 SENP3Q9H4L4 574 aaPredicted RBP14.99□□□□□ -0.01
CBWD1-215ENST00000487575 PHF23Q9BUL5 403 aaPredicted RBP14.83□□□□□ -0.04
CBWD1-215ENST00000487575 FOXD1Q16676 465 aa13.96□□□□□ -0.17
CBWD1-215ENST00000487575 CCDC180Q9P1Z9 1646 aa13.95□□□□□ -0.18
CBWD1-215ENST00000487575 PLPPR3Q6T4P5 718 aa13.54□□□□□ -0.24
CBWD1-215ENST00000487575 ZCCHC6Q5VYS8 1495 aaKnown RBP13.38□□□□□ -0.27
CBWD1-215ENST00000487575 ABCC9O60706 1549 aa13.22□□□□□ -0.29
CBWD1-215ENST00000487575 DCAF1Q9Y4B6 1507 aa13.21□□□□□ -0.29
CBWD1-215ENST00000487575 DCAF8L2P0C7V8 631 aa13.19□□□□□ -0.3
CBWD1-215ENST00000487575 PPP6R1Q9UPN7 881 aa13.19□□□□□ -0.3
CBWD1-215ENST00000487575 ADRA2BP18089 450 aa13.12□□□□□ -0.31
CBWD1-215ENST00000487575 MYO15BQ96JP2 1530 aa13.09□□□□□ -0.31
CBWD1-215ENST00000487575 PIAS4Q8N2W9 510 aaPredicted RBP13.06□□□□□ -0.32
CBWD1-215ENST00000487575 NACADO15069 1562 aa13.02□□□□□ -0.33
CBWD1-215ENST00000487575 MSH5O43196 834 aa12.98□□□□□ -0.33
CBWD1-215ENST00000487575 SHROOM4Q9ULL8 1493 aa12.93□□□□□ -0.34
CBWD1-215ENST00000487575 RB1CC1Q8TDY2 1594 aa12.91□□□□□ -0.34
CBWD1-215ENST00000487575 SCRIBQ14160 1630 aa12.79□□□□□ -0.36
CBWD1-215ENST00000487575 UNC13AQ9UPW8 1703 aa12.59□□□□□ -0.39
CBWD1-215ENST00000487575 BICRAQ9NZM4 1560 aa12.5□□□□□ -0.41
CBWD1-215ENST00000487575 PABPN1Q86U42 306 aaKnown RBP eCLIP12.46□□□□□ -0.41
CBWD1-215ENST00000487575 SUPT5HO00267 1087 aaKnown RBP12.43□□□□□ -0.42
CBWD1-215ENST00000487575 POTEDQ86YR6 584 aa12.43□□□□□ -0.42
CBWD1-215ENST00000487575 CECR2Q9BXF3 1484 aa12.38□□□□□ -0.43
CBWD1-215ENST00000487575 RSF1Q96T23 1441 aaPredicted RBP12.34□□□□□ -0.43
CBWD1-215ENST00000487575 BAZ1AQ9NRL2 1556 aaPredicted RBP12.33□□□□□ -0.44
CBWD1-215ENST00000487575 MROH2BQ7Z745 1585 aa12.3□□□□□ -0.44
CBWD1-215ENST00000487575 SMARCA4P51532 1647 aa12.27□□□□□ -0.45
CBWD1-215ENST00000487575 WIZO95785 1651 aa12.18□□□□□ -0.46
CBWD1-215ENST00000487575 EIF4G1Q04637 1599 aaKnown RBP12.13□□□□□ -0.47
CBWD1-215ENST00000487575 PEG3Q9GZU2 1588 aa12.13□□□□□ -0.47
CBWD1-215ENST00000487575 SMARCA2P51531 1590 aa12.1□□□□□ -0.47
CBWD1-215ENST00000487575 TOP2AP11388 1531 aaKnown RBP12.09□□□□□ -0.47
CBWD1-215ENST00000487575 ATAD2BQ9ULI0 1458 aa12.09□□□□□ -0.47
CBWD1-215ENST00000487575 BAZ1BQ9UIG0 1483 aaKnown RBP12.03□□□□□ -0.48
CBWD1-215ENST00000487575 NCAPD3P42695 1498 aa12.01□□□□□ -0.49
CBWD1-215ENST00000487575 MAPK8IP2Q13387 824 aaPredicted RBP12□□□□□ -0.49
CBWD1-215ENST00000487575 HMGXB3Q12766 1538 aa11.98□□□□□ -0.49
CBWD1-215ENST00000487575 SCAF1Q9H7N4 1312 aaKnown RBP11.97□□□□□ -0.49
CBWD1-215ENST00000487575 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
CBWD1-215ENST00000487575 CCDC88BA6NC98 1476 aa11.96□□□□□ -0.49
CBWD1-215ENST00000487575 DMRT2Q9Y5R5 561 aa11.93□□□□□ -0.5
CBWD1-215ENST00000487575 PPP4R3CPQ6ZMV5 832 aa11.87□□□□□ -0.51
CBWD1-215ENST00000487575 CFTRP13569 1480 aa11.72□□□□□ -0.53
CBWD1-215ENST00000487575 TRIM41Q8WV44 630 aa11.72□□□□□ -0.53
CBWD1-215ENST00000487575 DNAJC5BQ9UF47 199 aa11.72□□□□□ -0.53
CBWD1-215ENST00000487575 CADPSQ9ULU8 1353 aa11.7□□□□□ -0.54
CBWD1-215ENST00000487575 ABCC8Q09428 1581 aa11.66□□□□□ -0.54
CBWD1-215ENST00000487575 WRNQ14191 1432 aaPredicted RBP eCLIP11.63□□□□□ -0.55
CBWD1-215ENST00000487575 PRDM2Q13029 1718 aa11.63□□□□□ -0.55
CBWD1-215ENST00000487575 CNKSR2Q8WXI2 1034 aa11.63□□□□□ -0.55
CBWD1-215ENST00000487575 LAMC3Q9Y6N6 1575 aa11.6□□□□□ -0.55
CBWD1-215ENST00000487575 NESP48681 1621 aa11.58□□□□□ -0.56
CBWD1-215ENST00000487575 SYNJ1O43426 1573 aa11.56□□□□□ -0.56
CBWD1-215ENST00000487575 HOXD11P31277 338 aaPredicted RBP11.56□□□□□ -0.56
CBWD1-215ENST00000487575 FANCD2Q9BXW9 1451 aa11.56□□□□□ -0.56
CBWD1-215ENST00000487575 PDS5BQ9NTI5 1447 aa11.54□□□□□ -0.56
CBWD1-215ENST00000487575 TOP2BQ02880 1626 aa11.54□□□□□ -0.56
CBWD1-215ENST00000487575 BIVM-ERCC5R4GMW8 1640 aa11.52□□□□□ -0.57
CBWD1-215ENST00000487575 CUX1P39880 1505 aa11.51□□□□□ -0.57
CBWD1-215ENST00000487575 CEP164Q9UPV0 1460 aa11.5□□□□□ -0.57
CBWD1-215ENST00000487575 RNF216Q9NWF9 866 aaPredicted RBP11.49□□□□□ -0.57
CBWD1-215ENST00000487575 FAM9AQ8IZU1 332 aaPredicted RBP11.47□□□□□ -0.57
CBWD1-215ENST00000487575 EEA1Q15075 1411 aa11.46□□□□□ -0.57
CBWD1-215ENST00000487575 DNMBPQ6XZF7 1577 aa11.44□□□□□ -0.58
CBWD1-215ENST00000487575 SOGA1O94964 1423 aa11.44□□□□□ -0.58
CBWD1-215ENST00000487575 NCBP3Q53F19 620 aaKnown RBP11.44□□□□□ -0.58
CBWD1-215ENST00000487575 KIF21AQ7Z4S6 1674 aa11.43□□□□□ -0.58
CBWD1-215ENST00000487575 TOPBP1Q92547 1522 aa11.42□□□□□ -0.58
CBWD1-215ENST00000487575 URB2Q14146 1524 aaKnown RBP11.4□□□□□ -0.58
CBWD1-215ENST00000487575 FGD5Q6ZNL6 1462 aa11.4□□□□□ -0.58
CBWD1-215ENST00000487575 LOC105371045A0A1W2PR82 267 aa11.4□□□□□ -0.59
CBWD1-215ENST00000487575 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
CBWD1-215ENST00000487575 RUSC2Q8N2Y8 1516 aa11.39□□□□□ -0.59
CBWD1-215ENST00000487575 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
CBWD1-215ENST00000487575 ERCC6Q03468 1493 aa11.37□□□□□ -0.59
CBWD1-215ENST00000487575 KIF27Q86VH2 1401 aa11.36□□□□□ -0.59
CBWD1-215ENST00000487575 POLA1P09884 1462 aaPredicted RBP11.36□□□□□ -0.59
CBWD1-215ENST00000487575 DCAF8L1A6NGE4 600 aa11.33□□□□□ -0.6
CBWD1-215ENST00000487575 NPM3O75607 178 aaKnown RBP11.33□□□□□ -0.6
CBWD1-215ENST00000487575 CUX2O14529 1486 aa11.33□□□□□ -0.6
CBWD1-215ENST00000487575 WDR62O43379 1518 aa11.31□□□□□ -0.6
CBWD1-215ENST00000487575 ABCA10Q8WWZ4 1543 aa11.31□□□□□ -0.6
CBWD1-215ENST00000487575 RAD54L2Q9Y4B4 1467 aa11.31□□□□□ -0.6
CBWD1-215ENST00000487575 EHMT2Q96KQ7 1210 aa11.29□□□□□ -0.6
CBWD1-215ENST00000487575 KIF21BO75037 1637 aa11.28□□□□□ -0.6
CBWD1-215ENST00000487575 GOLGA3Q08378 1498 aa11.27□□□□□ -0.6
CBWD1-215ENST00000487575 THOC2Q8NI27 1593 aaKnown RBP11.27□□□□□ -0.6
CBWD1-215ENST00000487575 IGF1RP08069 1367 aa11.26□□□□□ -0.61
CBWD1-215ENST00000487575 PRXQ9BXM0 1461 aa11.25□□□□□ -0.61
CBWD1-215ENST00000487575 KCNA4P22459 653 aa11.25□□□□□ -0.61
CBWD1-215ENST00000487575 WDR97A6NE52 1622 aa11.25□□□□□ -0.61
CBWD1-215ENST00000487575 TARBP1Q13395 1621 aaKnown RBP11.25□□□□□ -0.61
CBWD1-215ENST00000487575 IFT140Q96RY7 1462 aa11.24□□□□□ -0.61
CBWD1-215ENST00000487575 UBTFP17480 764 aaKnown RBP11.23□□□□□ -0.61
CBWD1-215ENST00000487575 TNIKQ9UKE5 1360 aa11.23□□□□□ -0.61
CBWD1-215ENST00000487575 TDRD9Q8NDG6 1382 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms