RNA–Protein interactions for RNA: ENST00000485745.1

SEMA6C-207, Transcript of semaphorin 6C, humanhuman

TSL 5

Gene SEMA6C, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-207ENST00000485745 NISCHQ9Y2I1 1504 aa24.35■■□□□ 1.49
SEMA6C-207ENST00000485745 CCDC180Q9P1Z9 1646 aa20.9■□□□□ 0.94
SEMA6C-207ENST00000485745 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
SEMA6C-207ENST00000485745 SHROOM4Q9ULL8 1493 aa20.29■□□□□ 0.84
SEMA6C-207ENST00000485745 DCAF1Q9Y4B6 1507 aa20.18■□□□□ 0.82
SEMA6C-207ENST00000485745 DCAF8L2P0C7V8 631 aa19.96■□□□□ 0.79
SEMA6C-207ENST00000485745 SUPT5HO00267 1087 aaKnown RBP19.89■□□□□ 0.77
SEMA6C-207ENST00000485745 MYO15BQ96JP2 1530 aa19.71■□□□□ 0.75
SEMA6C-207ENST00000485745 CHIC1Q5VXU3 224 aa19.39■□□□□ 0.69
SEMA6C-207ENST00000485745 NACADO15069 1562 aa19.38■□□□□ 0.69
SEMA6C-207ENST00000485745 ABCC9O60706 1549 aa19.35■□□□□ 0.69
SEMA6C-207ENST00000485745 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
SEMA6C-207ENST00000485745 RSF1Q96T23 1441 aaPredicted RBP19.15■□□□□ 0.66
SEMA6C-207ENST00000485745 RB1CC1Q8TDY2 1594 aa19.05■□□□□ 0.64
SEMA6C-207ENST00000485745 CECR2Q9BXF3 1484 aa18.82■□□□□ 0.6
SEMA6C-207ENST00000485745 MROH2BQ7Z745 1585 aa18.8■□□□□ 0.6
SEMA6C-207ENST00000485745 BAZ1AQ9NRL2 1556 aaPredicted RBP18.76■□□□□ 0.59
SEMA6C-207ENST00000485745 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
SEMA6C-207ENST00000485745 WIZO95785 1651 aa18.64■□□□□ 0.57
SEMA6C-207ENST00000485745 LOC105371045A0A1W2PR82 267 aa18.63■□□□□ 0.57
SEMA6C-207ENST00000485745 SMARCA4P51532 1647 aa18.55■□□□□ 0.56
SEMA6C-207ENST00000485745 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
SEMA6C-207ENST00000485745 HRCP23327 699 aa18.53■□□□□ 0.56
SEMA6C-207ENST00000485745 UNC13AQ9UPW8 1703 aa18.52■□□□□ 0.55
SEMA6C-207ENST00000485745 PCGF6Q9BYE7 350 aa18.5■□□□□ 0.55
SEMA6C-207ENST00000485745 EIF4G1Q04637 1599 aaKnown RBP18.42■□□□□ 0.54
SEMA6C-207ENST00000485745 TRIM26Q12899 539 aaPredicted RBP18.41■□□□□ 0.54
SEMA6C-207ENST00000485745 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
SEMA6C-207ENST00000485745 CCDC88BA6NC98 1476 aa18.36■□□□□ 0.53
SEMA6C-207ENST00000485745 SMARCA2P51531 1590 aa18.34■□□□□ 0.53
SEMA6C-207ENST00000485745 FAM9AQ8IZU1 332 aaPredicted RBP18.33■□□□□ 0.52
SEMA6C-207ENST00000485745 PEG3Q9GZU2 1588 aa18.31■□□□□ 0.52
SEMA6C-207ENST00000485745 PABPN1Q86U42 306 aaKnown RBP eCLIP18.27■□□□□ 0.52
SEMA6C-207ENST00000485745 EEA1Q15075 1411 aa18.18■□□□□ 0.5
SEMA6C-207ENST00000485745 ATAD2BQ9ULI0 1458 aa18.13■□□□□ 0.49
SEMA6C-207ENST00000485745 ZEB1P37275 1124 aaPredicted RBP18.12■□□□□ 0.49
SEMA6C-207ENST00000485745 ABCC8Q09428 1581 aa18.11■□□□□ 0.49
SEMA6C-207ENST00000485745 BAZ1BQ9UIG0 1483 aaKnown RBP18.07■□□□□ 0.48
SEMA6C-207ENST00000485745 WRNQ14191 1432 aaPredicted RBP eCLIP18.03■□□□□ 0.48
SEMA6C-207ENST00000485745 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
SEMA6C-207ENST00000485745 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
SEMA6C-207ENST00000485745 TNIKQ9UKE5 1360 aa17.99■□□□□ 0.47
SEMA6C-207ENST00000485745 SOGA1O94964 1423 aa17.96■□□□□ 0.47
SEMA6C-207ENST00000485745 GOLGA3Q08378 1498 aa17.91■□□□□ 0.46
SEMA6C-207ENST00000485745 CEP162Q5TB80 1403 aa17.89■□□□□ 0.46
SEMA6C-207ENST00000485745 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
SEMA6C-207ENST00000485745 HMGXB3Q12766 1538 aa17.89■□□□□ 0.45
SEMA6C-207ENST00000485745 PPARGC1BQ86YN6 1023 aaKnown RBP17.87■□□□□ 0.45
SEMA6C-207ENST00000485745 CEP164Q9UPV0 1460 aa17.84■□□□□ 0.45
SEMA6C-207ENST00000485745 SYNJ1O43426 1573 aa17.83■□□□□ 0.45
SEMA6C-207ENST00000485745 UBTFP17480 764 aaKnown RBP17.83■□□□□ 0.44
SEMA6C-207ENST00000485745 RUSC2Q8N2Y8 1516 aa17.82■□□□□ 0.44
SEMA6C-207ENST00000485745 KIF21BO75037 1637 aa17.81■□□□□ 0.44
SEMA6C-207ENST00000485745 TOP2BQ02880 1626 aa17.76■□□□□ 0.43
SEMA6C-207ENST00000485745 BIVM-ERCC5R4GMW8 1640 aa17.71■□□□□ 0.43
SEMA6C-207ENST00000485745 CFTRP13569 1480 aa17.65■□□□□ 0.42
SEMA6C-207ENST00000485745 CLIP1P30622 1438 aa17.63■□□□□ 0.41
SEMA6C-207ENST00000485745 ERICH3Q5RHP9 1530 aa17.6■□□□□ 0.41
SEMA6C-207ENST00000485745 VPS8Q8N3P4 1428 aa17.57■□□□□ 0.4
SEMA6C-207ENST00000485745 CCER1Q8TC90 406 aaPredicted RBP17.57■□□□□ 0.4
SEMA6C-207ENST00000485745 RAPGEF2Q9Y4G8 1499 aa17.56■□□□□ 0.4
SEMA6C-207ENST00000485745 PRXQ9BXM0 1461 aa17.55■□□□□ 0.4
SEMA6C-207ENST00000485745 KIF27Q86VH2 1401 aa17.55■□□□□ 0.4
SEMA6C-207ENST00000485745 CUX1P39880 1505 aa17.54■□□□□ 0.4
SEMA6C-207ENST00000485745 APLP2Q06481 763 aa17.53■□□□□ 0.4
SEMA6C-207ENST00000485745 CADPSQ9ULU8 1353 aa17.5■□□□□ 0.39
SEMA6C-207ENST00000485745 PRDM2Q13029 1718 aa17.49■□□□□ 0.39
SEMA6C-207ENST00000485745 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.47■□□□□ 0.39
SEMA6C-207ENST00000485745 TTBK1Q5TCY1 1321 aaPredicted RBP17.41■□□□□ 0.38
SEMA6C-207ENST00000485745 CC2D2AQ9P2K1 1620 aa17.37■□□□□ 0.37
SEMA6C-207ENST00000485745 ARAP1Q96P48 1450 aa17.32■□□□□ 0.36
SEMA6C-207ENST00000485745 CUX2O14529 1486 aa17.31■□□□□ 0.36
SEMA6C-207ENST00000485745 IGF1RP08069 1367 aa17.3■□□□□ 0.36
SEMA6C-207ENST00000485745 FGD5Q6ZNL6 1462 aa17.27■□□□□ 0.36
SEMA6C-207ENST00000485745 FANCD2Q9BXW9 1451 aa17.27■□□□□ 0.36
SEMA6C-207ENST00000485745 RANGAP1P46060 587 aaPredicted RBP17.26■□□□□ 0.35
SEMA6C-207ENST00000485745 CARMIL1Q5VZK9 1371 aa17.24■□□□□ 0.35
SEMA6C-207ENST00000485745 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
SEMA6C-207ENST00000485745 DNMBPQ6XZF7 1577 aa17.22■□□□□ 0.35
SEMA6C-207ENST00000485745 ARHGAP35Q9NRY4 1499 aa17.21■□□□□ 0.35
SEMA6C-207ENST00000485745 MAP3K1Q13233 1512 aa17.18■□□□□ 0.34
SEMA6C-207ENST00000485745 CLSPNQ9HAW4 1339 aa17.18■□□□□ 0.34
SEMA6C-207ENST00000485745 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
SEMA6C-207ENST00000485745 LAMC3Q9Y6N6 1575 aa17.15■□□□□ 0.34
SEMA6C-207ENST00000485745 RRBP1Q9P2E9 1410 aaKnown RBP17.14■□□□□ 0.33
SEMA6C-207ENST00000485745 TOPBP1Q92547 1522 aa17.14■□□□□ 0.33
SEMA6C-207ENST00000485745 ZNF316A6NFI3 1004 aaPredicted RBP17.12■□□□□ 0.33
SEMA6C-207ENST00000485745 DIEXFQ68CQ4 756 aaKnown RBP17.12■□□□□ 0.33
SEMA6C-207ENST00000485745 FHAD1B1AJZ9 1412 aa17.12■□□□□ 0.33
SEMA6C-207ENST00000485745 KANK4Q5T7N3 995 aaPredicted RBP17.11■□□□□ 0.33
SEMA6C-207ENST00000485745 POLA1P09884 1462 aaPredicted RBP17.09■□□□□ 0.33
SEMA6C-207ENST00000485745 CUL7Q14999 1698 aa17.07■□□□□ 0.32
SEMA6C-207ENST00000485745 PDS5BQ9NTI5 1447 aa17.07■□□□□ 0.32
SEMA6C-207ENST00000485745 CCNB3Q8WWL7 1395 aa17.06■□□□□ 0.32
SEMA6C-207ENST00000485745 EFCAB5A4FU69 1503 aa17.05■□□□□ 0.32
SEMA6C-207ENST00000485745 RAD54L2Q9Y4B4 1467 aa17.04■□□□□ 0.32
SEMA6C-207ENST00000485745 TIAM1Q13009 1591 aa17.03■□□□□ 0.32
SEMA6C-207ENST00000485745 NESP48681 1621 aa17.03■□□□□ 0.32
SEMA6C-207ENST00000485745 AQRO60306 1485 aaKnown RBP eCLIP16.99■□□□□ 0.31
SEMA6C-207ENST00000485745 DHX57Q6P158 1386 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms