RNA–Protein interactions for RNA: ENST00000484680.1

GTF3C2-211, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 364 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-211ENST00000484680 AEBP2Q6ZN18 517 aaPredicted RBP17.94■□□□□ 0.46
GTF3C2-211ENST00000484680 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
GTF3C2-211ENST00000484680 SENP3Q9H4L4 574 aaPredicted RBP15.35■□□□□ 0.05
GTF3C2-211ENST00000484680 PHF23Q9BUL5 403 aaPredicted RBP15.11■□□□□ 0.01
GTF3C2-211ENST00000484680 NISCHQ9Y2I1 1504 aa15□□□□□ -0.01
GTF3C2-211ENST00000484680 FOXD1Q16676 465 aa14.31□□□□□ -0.12
GTF3C2-211ENST00000484680 MSH5O43196 834 aa13.48□□□□□ -0.25
GTF3C2-211ENST00000484680 POTEDQ86YR6 584 aa13.45□□□□□ -0.26
GTF3C2-211ENST00000484680 PLPPR3Q6T4P5 718 aa13.39□□□□□ -0.27
GTF3C2-211ENST00000484680 PIAS4Q8N2W9 510 aaPredicted RBP13.29□□□□□ -0.28
GTF3C2-211ENST00000484680 PPP6R1Q9UPN7 881 aa13.24□□□□□ -0.29
GTF3C2-211ENST00000484680 CCDC180Q9P1Z9 1646 aa13.17□□□□□ -0.3
GTF3C2-211ENST00000484680 ADRA2BP18089 450 aa13.15□□□□□ -0.3
GTF3C2-211ENST00000484680 ZCCHC6Q5VYS8 1495 aaKnown RBP12.57□□□□□ -0.4
GTF3C2-211ENST00000484680 ABCC9O60706 1549 aa12.55□□□□□ -0.4
GTF3C2-211ENST00000484680 DCAF8L2P0C7V8 631 aa12.44□□□□□ -0.42
GTF3C2-211ENST00000484680 DCAF1Q9Y4B6 1507 aa12.43□□□□□ -0.42
GTF3C2-211ENST00000484680 MYO15BQ96JP2 1530 aa12.35□□□□□ -0.43
GTF3C2-211ENST00000484680 NACADO15069 1562 aa12.31□□□□□ -0.44
GTF3C2-211ENST00000484680 RB1CC1Q8TDY2 1594 aa12.24□□□□□ -0.45
GTF3C2-211ENST00000484680 DMRT2Q9Y5R5 561 aa12.15□□□□□ -0.46
GTF3C2-211ENST00000484680 MAPK8IP2Q13387 824 aaPredicted RBP12.13□□□□□ -0.47
GTF3C2-211ENST00000484680 SHROOM4Q9ULL8 1493 aa12.1□□□□□ -0.47
GTF3C2-211ENST00000484680 SCAF1Q9H7N4 1312 aaKnown RBP12.08□□□□□ -0.48
GTF3C2-211ENST00000484680 SCRIBQ14160 1630 aa12.06□□□□□ -0.48
GTF3C2-211ENST00000484680 UNC13AQ9UPW8 1703 aa11.94□□□□□ -0.5
GTF3C2-211ENST00000484680 BICRAQ9NZM4 1560 aa11.81□□□□□ -0.52
GTF3C2-211ENST00000484680 PABPN1Q86U42 306 aaKnown RBP eCLIP11.79□□□□□ -0.52
GTF3C2-211ENST00000484680 PPP4R3CPQ6ZMV5 832 aa11.69□□□□□ -0.54
GTF3C2-211ENST00000484680 HOXD11P31277 338 aaPredicted RBP11.66□□□□□ -0.54
GTF3C2-211ENST00000484680 CECR2Q9BXF3 1484 aa11.63□□□□□ -0.55
GTF3C2-211ENST00000484680 CACNB1Q02641 598 aaPredicted RBP11.62□□□□□ -0.55
GTF3C2-211ENST00000484680 BAZ1AQ9NRL2 1556 aaPredicted RBP11.62□□□□□ -0.55
GTF3C2-211ENST00000484680 SUPT5HO00267 1087 aaKnown RBP11.59□□□□□ -0.55
GTF3C2-211ENST00000484680 RSF1Q96T23 1441 aaPredicted RBP11.57□□□□□ -0.56
GTF3C2-211ENST00000484680 SMARCA4P51532 1647 aa11.57□□□□□ -0.56
GTF3C2-211ENST00000484680 MROH2BQ7Z745 1585 aa11.56□□□□□ -0.56
GTF3C2-211ENST00000484680 CNKSR2Q8WXI2 1034 aa11.55□□□□□ -0.56
GTF3C2-211ENST00000484680 DCAF8L1A6NGE4 600 aa11.52□□□□□ -0.57
GTF3C2-211ENST00000484680 EIF4G1Q04637 1599 aaKnown RBP11.5□□□□□ -0.57
GTF3C2-211ENST00000484680 RNF216Q9NWF9 866 aaPredicted RBP11.5□□□□□ -0.57
GTF3C2-211ENST00000484680 RNF39Q9H2S5 420 aa11.49□□□□□ -0.57
GTF3C2-211ENST00000484680 WIZO95785 1651 aa11.46□□□□□ -0.58
GTF3C2-211ENST00000484680 PEG3Q9GZU2 1588 aa11.44□□□□□ -0.58
GTF3C2-211ENST00000484680 SMARCA2P51531 1590 aa11.43□□□□□ -0.58
GTF3C2-211ENST00000484680 ATAD2BQ9ULI0 1458 aa11.41□□□□□ -0.58
GTF3C2-211ENST00000484680 DNAJC5BQ9UF47 199 aa11.38□□□□□ -0.59
GTF3C2-211ENST00000484680 TOP2AP11388 1531 aaKnown RBP11.36□□□□□ -0.59
GTF3C2-211ENST00000484680 CC2D2AQ9P2K1 1620 aa11.36□□□□□ -0.59
GTF3C2-211ENST00000484680 BAZ1BQ9UIG0 1483 aaKnown RBP11.36□□□□□ -0.59
GTF3C2-211ENST00000484680 NCAPD3P42695 1498 aa11.35□□□□□ -0.59
GTF3C2-211ENST00000484680 C1QBPQ07021 282 aaKnown RBP11.33□□□□□ -0.6
GTF3C2-211ENST00000484680 HMGXB3Q12766 1538 aa11.33□□□□□ -0.6
GTF3C2-211ENST00000484680 CCDC88BA6NC98 1476 aa11.23□□□□□ -0.61
GTF3C2-211ENST00000484680 NCBP3Q53F19 620 aaKnown RBP11.19□□□□□ -0.62
GTF3C2-211ENST00000484680 CFTRP13569 1480 aa11.05□□□□□ -0.64
GTF3C2-211ENST00000484680 CADPSQ9ULU8 1353 aa11.04□□□□□ -0.64
GTF3C2-211ENST00000484680 NPM3O75607 178 aaKnown RBP11.03□□□□□ -0.64
GTF3C2-211ENST00000484680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.01□□□□□ -0.653e-8■■□□□ 14.4
GTF3C2-211ENST00000484680 LAMC3Q9Y6N6 1575 aa11□□□□□ -0.65
GTF3C2-211ENST00000484680 PRDM2Q13029 1718 aa11□□□□□ -0.65
GTF3C2-211ENST00000484680 NESP48681 1621 aa10.95□□□□□ -0.66
GTF3C2-211ENST00000484680 TRIM41Q8WV44 630 aa10.94□□□□□ -0.66
GTF3C2-211ENST00000484680 PDS5BQ9NTI5 1447 aa10.93□□□□□ -0.66
GTF3C2-211ENST00000484680 ABCC8Q09428 1581 aa10.93□□□□□ -0.66
GTF3C2-211ENST00000484680 FANCD2Q9BXW9 1451 aa10.92□□□□□ -0.66
GTF3C2-211ENST00000484680 WRNQ14191 1432 aaPredicted RBP eCLIP10.92□□□□□ -0.66
GTF3C2-211ENST00000484680 CEP164Q9UPV0 1460 aa10.87□□□□□ -0.67
GTF3C2-211ENST00000484680 SYNJ1O43426 1573 aa10.85□□□□□ -0.67
GTF3C2-211ENST00000484680 TOP2BQ02880 1626 aa10.84□□□□□ -0.67
GTF3C2-211ENST00000484680 KIF21AQ7Z4S6 1674 aa10.83□□□□□ -0.68
GTF3C2-211ENST00000484680 BIVM-ERCC5R4GMW8 1640 aa10.83□□□□□ -0.68
GTF3C2-211ENST00000484680 CUX1P39880 1505 aa10.82□□□□□ -0.68
GTF3C2-211ENST00000484680 ERCC6Q03468 1493 aa10.81□□□□□ -0.68
GTF3C2-211ENST00000484680 U3KPZ7 1027 aaPredicted RBP10.8□□□□□ -0.68
GTF3C2-211ENST00000484680 DNMBPQ6XZF7 1577 aa10.8□□□□□ -0.68
GTF3C2-211ENST00000484680 MRC2Q9UBG0 1479 aa10.78□□□□□ -0.68
GTF3C2-211ENST00000484680 TOPBP1Q92547 1522 aa10.78□□□□□ -0.68
GTF3C2-211ENST00000484680 URB2Q14146 1524 aaKnown RBP10.77□□□□□ -0.69
GTF3C2-211ENST00000484680 FGD5Q6ZNL6 1462 aa10.74□□□□□ -0.69
GTF3C2-211ENST00000484680 EEA1Q15075 1411 aa10.72□□□□□ -0.69
GTF3C2-211ENST00000484680 WDR62O43379 1518 aa10.72□□□□□ -0.69
GTF3C2-211ENST00000484680 POLA1P09884 1462 aaPredicted RBP10.71□□□□□ -0.69
GTF3C2-211ENST00000484680 THOC2Q8NI27 1593 aaKnown RBP10.7□□□□□ -0.7
GTF3C2-211ENST00000484680 SOGA1O94964 1423 aa10.7□□□□□ -0.7
GTF3C2-211ENST00000484680 FAM9AQ8IZU1 332 aaPredicted RBP10.7□□□□□ -0.7
GTF3C2-211ENST00000484680 DSG3P32926 999 aa10.69□□□□□ -0.7
GTF3C2-211ENST00000484680 SPINK5Q9NQ38 1064 aaPredicted RBP10.67□□□□□ -0.7
GTF3C2-211ENST00000484680 KIF27Q86VH2 1401 aa10.67□□□□□ -0.7
GTF3C2-211ENST00000484680 ABCA10Q8WWZ4 1543 aa10.66□□□□□ -0.7
GTF3C2-211ENST00000484680 RAD54L2Q9Y4B4 1467 aa10.66□□□□□ -0.7
GTF3C2-211ENST00000484680 CUX2O14529 1486 aa10.65□□□□□ -0.7
GTF3C2-211ENST00000484680 RUSC2Q8N2Y8 1516 aa10.64□□□□□ -0.71
GTF3C2-211ENST00000484680 CSRNP3Q8WYN3 585 aa10.64□□□□□ -0.71
GTF3C2-211ENST00000484680 IFT140Q96RY7 1462 aa10.63□□□□□ -0.71
GTF3C2-211ENST00000484680 CAPN15O75808 1086 aa10.63□□□□□ -0.71
GTF3C2-211ENST00000484680 TARBP1Q13395 1621 aaKnown RBP10.62□□□□□ -0.71
GTF3C2-211ENST00000484680 KCNA4P22459 653 aa10.62□□□□□ -0.71
GTF3C2-211ENST00000484680 WDR97A6NE52 1622 aa10.62□□□□□ -0.71
GTF3C2-211ENST00000484680 SLC4A2P04920 1241 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms