RNA–Protein interactions for RNA: ENST00000484604.5

TPT1-206, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 2

Gene TPT1, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-206ENST00000484604 AEBP2Q6ZN18 517 aaPredicted RBP22.99■■□□□ 1.27
TPT1-206ENST00000484604 CHIC1Q5VXU3 224 aa21.59■■□□□ 1.05
TPT1-206ENST00000484604 SENP3Q9H4L4 574 aaPredicted RBP19.63■□□□□ 0.73
TPT1-206ENST00000484604 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
TPT1-206ENST00000484604 NISCHQ9Y2I1 1504 aa18.65■□□□□ 0.58
TPT1-206ENST00000484604 FOXD1Q16676 465 aa18.35■□□□□ 0.53
TPT1-206ENST00000484604 POTEDQ86YR6 584 aa17.25■□□□□ 0.35
TPT1-206ENST00000484604 MSH5O43196 834 aa17.24■□□□□ 0.35
TPT1-206ENST00000484604 PLPPR3Q6T4P5 718 aa17.15■□□□□ 0.34
TPT1-206ENST00000484604 PIAS4Q8N2W9 510 aaPredicted RBP17.1■□□□□ 0.33
TPT1-206ENST00000484604 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
TPT1-206ENST00000484604 ADRA2BP18089 450 aa16.93■□□□□ 0.3
TPT1-206ENST00000484604 CCDC180Q9P1Z9 1646 aa16.44■□□□□ 0.22
TPT1-206ENST00000484604 ABCC9O60706 1549 aa15.78■□□□□ 0.12
TPT1-206ENST00000484604 ZCCHC6Q5VYS8 1495 aaKnown RBP15.63■□□□□ 0.09
TPT1-206ENST00000484604 MAPK8IP2Q13387 824 aaPredicted RBP15.62■□□□□ 0.09
TPT1-206ENST00000484604 DMRT2Q9Y5R5 561 aa15.53■□□□□ 0.08
TPT1-206ENST00000484604 DCAF8L2P0C7V8 631 aa15.5■□□□□ 0.07
TPT1-206ENST00000484604 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.07
TPT1-206ENST00000484604 DCAF1Q9Y4B6 1507 aa15.44■□□□□ 0.06
TPT1-206ENST00000484604 MYO15BQ96JP2 1530 aa15.38■□□□□ 0.05
TPT1-206ENST00000484604 NACADO15069 1562 aa15.37■□□□□ 0.05
TPT1-206ENST00000484604 RB1CC1Q8TDY2 1594 aa15.33■□□□□ 0.05
TPT1-206ENST00000484604 SCRIBQ14160 1630 aa15.06■□□□□ 0
TPT1-206ENST00000484604 PPP4R3CPQ6ZMV5 832 aa15.02■□□□□ -0
TPT1-206ENST00000484604 SHROOM4Q9ULL8 1493 aa15□□□□□ -0.01
TPT1-206ENST00000484604 CACNB1Q02641 598 aaPredicted RBP14.97□□□□□ -0.01
TPT1-206ENST00000484604 DCAF8L1A6NGE4 600 aa14.96□□□□□ -0.01
TPT1-206ENST00000484604 UNC13AQ9UPW8 1703 aa14.92□□□□□ -0.02
TPT1-206ENST00000484604 HOXD11P31277 338 aaPredicted RBP14.86□□□□□ -0.03
TPT1-206ENST00000484604 BICRAQ9NZM4 1560 aa14.8□□□□□ -0.04
TPT1-206ENST00000484604 PABPN1Q86U42 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
TPT1-206ENST00000484604 CNKSR2Q8WXI2 1034 aa14.77□□□□□ -0.05
TPT1-206ENST00000484604 RNF39Q9H2S5 420 aa14.69□□□□□ -0.06
TPT1-206ENST00000484604 RNF216Q9NWF9 866 aaPredicted RBP14.69□□□□□ -0.06
TPT1-206ENST00000484604 CECR2Q9BXF3 1484 aa14.48□□□□□ -0.09
TPT1-206ENST00000484604 BAZ1AQ9NRL2 1556 aaPredicted RBP14.47□□□□□ -0.09
TPT1-206ENST00000484604 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.09
TPT1-206ENST00000484604 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
TPT1-206ENST00000484604 SMARCA4P51532 1647 aa14.41□□□□□ -0.1
TPT1-206ENST00000484604 MROH2BQ7Z745 1585 aa14.38□□□□□ -0.11
TPT1-206ENST00000484604 DNAJC5BQ9UF47 199 aa14.36□□□□□ -0.11
TPT1-206ENST00000484604 NCBP3Q53F19 620 aaKnown RBP14.35□□□□□ -0.11
TPT1-206ENST00000484604 RSF1Q96T23 1441 aaPredicted RBP14.33□□□□□ -0.11
TPT1-206ENST00000484604 SUPT5HO00267 1087 aaKnown RBP14.28□□□□□ -0.12
TPT1-206ENST00000484604 CC2D2AQ9P2K1 1620 aa14.27□□□□□ -0.12
TPT1-206ENST00000484604 SMARCA2P51531 1590 aa14.26□□□□□ -0.13
TPT1-206ENST00000484604 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
TPT1-206ENST00000484604 WIZO95785 1651 aa14.24□□□□□ -0.13
TPT1-206ENST00000484604 ATAD2BQ9ULI0 1458 aa14.24□□□□□ -0.13
TPT1-206ENST00000484604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.19□□□□□ -0.14
TPT1-206ENST00000484604 BAZ1BQ9UIG0 1483 aaKnown RBP14.18□□□□□ -0.14
TPT1-206ENST00000484604 HMGXB3Q12766 1538 aa14.16□□□□□ -0.14
TPT1-206ENST00000484604 NCAPD3P42695 1498 aa14.16□□□□□ -0.14
TPT1-206ENST00000484604 NPM3O75607 178 aaKnown RBP14.15□□□□□ -0.14
TPT1-206ENST00000484604 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
TPT1-206ENST00000484604 CCDC88BA6NC98 1476 aa13.94□□□□□ -0.18
TPT1-206ENST00000484604 U3KPZ7 1027 aaPredicted RBP13.86□□□□□ -0.19
TPT1-206ENST00000484604 CADPSQ9ULU8 1353 aa13.79□□□□□ -0.2
TPT1-206ENST00000484604 CFTRP13569 1480 aa13.77□□□□□ -0.21
TPT1-206ENST00000484604 LAMC3Q9Y6N6 1575 aa13.77□□□□□ -0.21
TPT1-206ENST00000484604 KCNA4P22459 653 aa13.75□□□□□ -0.21
TPT1-206ENST00000484604 CAPN15O75808 1086 aa13.74□□□□□ -0.21
TPT1-206ENST00000484604 SPINK5Q9NQ38 1064 aaPredicted RBP13.74□□□□□ -0.21
TPT1-206ENST00000484604 NESP48681 1621 aa13.73□□□□□ -0.21
TPT1-206ENST00000484604 PRDM2Q13029 1718 aa13.7□□□□□ -0.22
TPT1-206ENST00000484604 DSG3P32926 999 aa13.69□□□□□ -0.22
TPT1-206ENST00000484604 PDS5BQ9NTI5 1447 aa13.68□□□□□ -0.22
TPT1-206ENST00000484604 FANCD2Q9BXW9 1451 aa13.65□□□□□ -0.22
TPT1-206ENST00000484604 ERCC6Q03468 1493 aa13.62□□□□□ -0.23
TPT1-206ENST00000484604 CEP164Q9UPV0 1460 aa13.62□□□□□ -0.23
TPT1-206ENST00000484604 KIF21AQ7Z4S6 1674 aa13.59□□□□□ -0.23
TPT1-206ENST00000484604 SLC4A2P04920 1241 aa13.58□□□□□ -0.24
TPT1-206ENST00000484604 ABCC8Q09428 1581 aa13.57□□□□□ -0.24
TPT1-206ENST00000484604 WRNQ14191 1432 aaPredicted RBP eCLIP13.55□□□□□ -0.24
TPT1-206ENST00000484604 MRC2Q9UBG0 1479 aa13.52□□□□□ -0.25
TPT1-206ENST00000484604 DNMBPQ6XZF7 1577 aa13.49□□□□□ -0.25
TPT1-206ENST00000484604 CUX1P39880 1505 aa13.48□□□□□ -0.25
TPT1-206ENST00000484604 SYNJ1O43426 1573 aa13.47□□□□□ -0.25
TPT1-206ENST00000484604 TRHP20396 242 aaPredicted RBP13.47□□□□□ -0.25
TPT1-206ENST00000484604 POTEHQ6S545 545 aa13.47□□□□□ -0.25
TPT1-206ENST00000484604 TRIM41Q8WV44 630 aa13.47□□□□□ -0.25
TPT1-206ENST00000484604 URB2Q14146 1524 aaKnown RBP13.47□□□□□ -0.25
TPT1-206ENST00000484604 THOC2Q8NI27 1593 aaKnown RBP13.46□□□□□ -0.25
TPT1-206ENST00000484604 TOP2BQ02880 1626 aa13.46□□□□□ -0.26
TPT1-206ENST00000484604 WDR62O43379 1518 aa13.45□□□□□ -0.26
TPT1-206ENST00000484604 TOPBP1Q92547 1522 aa13.45□□□□□ -0.26
TPT1-206ENST00000484604 BIVM-ERCC5R4GMW8 1640 aa13.45□□□□□ -0.26
TPT1-206ENST00000484604 APLP2Q06481 763 aa13.43□□□□□ -0.26
TPT1-206ENST00000484604 ABCB7O75027 752 aa13.41□□□□□ -0.26
TPT1-206ENST00000484604 FGD5Q6ZNL6 1462 aa13.4□□□□□ -0.26
TPT1-206ENST00000484604 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
TPT1-206ENST00000484604 POLA1P09884 1462 aaPredicted RBP13.37□□□□□ -0.27
TPT1-206ENST00000484604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.36□□□□□ -0.27
TPT1-206ENST00000484604 HNRNPUL2Q1KMD3 747 aaKnown RBP13.36□□□□□ -0.27
TPT1-206ENST00000484604 SOGA1O94964 1423 aa13.32□□□□□ -0.28
TPT1-206ENST00000484604 CUX2O14529 1486 aa13.31□□□□□ -0.28
TPT1-206ENST00000484604 IFT140Q96RY7 1462 aa13.31□□□□□ -0.28
TPT1-206ENST00000484604 RAD54L2Q9Y4B4 1467 aa13.3□□□□□ -0.28
TPT1-206ENST00000484604 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms