RNA–Protein interactions for RNA: ENST00000484425.6

FAM71F1-206, Transcript of family with sequence similarity 71 member F1, humanhuman

TSL 1 (best)

Gene FAM71F1, Length 1,818 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM71F1-206ENST00000484425 AEBP2Q6ZN18 517 aaPredicted RBP18■□□□□ 0.47
FAM71F1-206ENST00000484425 CHIC1Q5VXU3 224 aa17.96■□□□□ 0.47
FAM71F1-206ENST00000484425 NISCHQ9Y2I1 1504 aa16.64■□□□□ 0.25
FAM71F1-206ENST00000484425 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
FAM71F1-206ENST00000484425 SENP3Q9H4L4 574 aaPredicted RBP15.2■□□□□ 0.02
FAM71F1-206ENST00000484425 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.05
FAM71F1-206ENST00000484425 CCDC180Q9P1Z9 1646 aa14.56□□□□□ -0.08
FAM71F1-206ENST00000484425 FOXD1Q16676 465 aa14.06□□□□□ -0.16
FAM71F1-206ENST00000484425 ZCCHC6Q5VYS8 1495 aaKnown RBP13.97□□□□□ -0.17
FAM71F1-206ENST00000484425 ADRA2BP18089 450 aa13.87□□□□□ -0.19
FAM71F1-206ENST00000484425 PPP6R1Q9UPN7 881 aa13.87□□□□□ -0.19
FAM71F1-206ENST00000484425 DCAF1Q9Y4B6 1507 aa13.8□□□□□ -0.2
FAM71F1-206ENST00000484425 ABCC9O60706 1549 aa13.71□□□□□ -0.21
FAM71F1-206ENST00000484425 DCAF8L2P0C7V8 631 aa13.68□□□□□ -0.22
FAM71F1-206ENST00000484425 MYO15BQ96JP2 1530 aa13.66□□□□□ -0.22
FAM71F1-206ENST00000484425 NACADO15069 1562 aa13.56□□□□□ -0.24
FAM71F1-206ENST00000484425 SHROOM4Q9ULL8 1493 aa13.47□□□□□ -0.25
FAM71F1-206ENST00000484425 RB1CC1Q8TDY2 1594 aa13.44□□□□□ -0.26
FAM71F1-206ENST00000484425 PIAS4Q8N2W9 510 aaPredicted RBP13.37□□□□□ -0.27
FAM71F1-206ENST00000484425 SCRIBQ14160 1630 aa13.32□□□□□ -0.28
FAM71F1-206ENST00000484425 KCNA4P22459 653 aa13.24□□□□□ -0.29
FAM71F1-206ENST00000484425 UNC13AQ9UPW8 1703 aa13.15□□□□□ -0.3
FAM71F1-206ENST00000484425 PPP4R3CPQ6ZMV5 832 aa13.06□□□□□ -0.32
FAM71F1-206ENST00000484425 BICRAQ9NZM4 1560 aa13□□□□□ -0.33
FAM71F1-206ENST00000484425 SUPT5HO00267 1087 aaKnown RBP12.96□□□□□ -0.33
FAM71F1-206ENST00000484425 PABPN1Q86U42 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
FAM71F1-206ENST00000484425 CECR2Q9BXF3 1484 aa12.89□□□□□ -0.35
FAM71F1-206ENST00000484425 RSF1Q96T23 1441 aaPredicted RBP12.88□□□□□ -0.35
FAM71F1-206ENST00000484425 BAZ1AQ9NRL2 1556 aaPredicted RBP12.87□□□□□ -0.35
FAM71F1-206ENST00000484425 NCBP3Q53F19 620 aaKnown RBP12.83□□□□□ -0.36
FAM71F1-206ENST00000484425 MROH2BQ7Z745 1585 aa12.83□□□□□ -0.36
FAM71F1-206ENST00000484425 EHMT2Q96KQ7 1210 aa12.81□□□□□ -0.36
FAM71F1-206ENST00000484425 SMARCA4P51532 1647 aa12.8□□□□□ -0.36
FAM71F1-206ENST00000484425 MSH5O43196 834 aa12.79□□□□□ -0.36
FAM71F1-206ENST00000484425 WIZO95785 1651 aa12.73□□□□□ -0.37
FAM71F1-206ENST00000484425 SLC4A1APQ9BWU0 796 aaKnown RBP12.67□□□□□ -0.38
FAM71F1-206ENST00000484425 PEG3Q9GZU2 1588 aa12.67□□□□□ -0.38
FAM71F1-206ENST00000484425 NPM3O75607 178 aaKnown RBP12.67□□□□□ -0.38
FAM71F1-206ENST00000484425 SCAF1Q9H7N4 1312 aaKnown RBP12.67□□□□□ -0.38
FAM71F1-206ENST00000484425 EIF4G1Q04637 1599 aaKnown RBP12.62□□□□□ -0.39
FAM71F1-206ENST00000484425 TOP2AP11388 1531 aaKnown RBP12.62□□□□□ -0.39
FAM71F1-206ENST00000484425 SMARCA2P51531 1590 aa12.61□□□□□ -0.39
FAM71F1-206ENST00000484425 CNKSR2Q8WXI2 1034 aa12.6□□□□□ -0.39
FAM71F1-206ENST00000484425 ATAD2BQ9ULI0 1458 aa12.59□□□□□ -0.39
FAM71F1-206ENST00000484425 BAZ1BQ9UIG0 1483 aaKnown RBP12.51□□□□□ -0.41
FAM71F1-206ENST00000484425 NCAPD3P42695 1498 aa12.5□□□□□ -0.41
FAM71F1-206ENST00000484425 HMGXB3Q12766 1538 aa12.49□□□□□ -0.41
FAM71F1-206ENST00000484425 CCDC88BA6NC98 1476 aa12.47□□□□□ -0.41
FAM71F1-206ENST00000484425 MAPK8IP2Q13387 824 aaPredicted RBP12.46□□□□□ -0.41
FAM71F1-206ENST00000484425 CSRNP3Q8WYN3 585 aa12.46□□□□□ -0.42
FAM71F1-206ENST00000484425 CC2D2AQ9P2K1 1620 aa12.44□□□□□ -0.42
FAM71F1-206ENST00000484425 RNF216Q9NWF9 866 aaPredicted RBP12.25□□□□□ -0.45
FAM71F1-206ENST00000484425 TRIM41Q8WV44 630 aa12.23□□□□□ -0.45
FAM71F1-206ENST00000484425 ZBTB22O15209 634 aa12.21□□□□□ -0.46
FAM71F1-206ENST00000484425 CFTRP13569 1480 aa12.2□□□□□ -0.46
FAM71F1-206ENST00000484425 DNAJC5BQ9UF47 199 aa12.2□□□□□ -0.46
FAM71F1-206ENST00000484425 DMRT2Q9Y5R5 561 aa12.2□□□□□ -0.46
FAM71F1-206ENST00000484425 PRDM2Q13029 1718 aa12.19□□□□□ -0.46
FAM71F1-206ENST00000484425 ABCC8Q09428 1581 aa12.17□□□□□ -0.46
FAM71F1-206ENST00000484425 CADPSQ9ULU8 1353 aa12.17□□□□□ -0.46
FAM71F1-206ENST00000484425 WRNQ14191 1432 aaPredicted RBP eCLIP12.13□□□□□ -0.47
FAM71F1-206ENST00000484425 HOXD11P31277 338 aaPredicted RBP12.1□□□□□ -0.47
FAM71F1-206ENST00000484425 LAMC3Q9Y6N6 1575 aa12.1□□□□□ -0.47
FAM71F1-206ENST00000484425 SYNJ1O43426 1573 aa12.07□□□□□ -0.48
FAM71F1-206ENST00000484425 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
FAM71F1-206ENST00000484425 TOP2BQ02880 1626 aa12.05□□□□□ -0.48
FAM71F1-206ENST00000484425 BIVM-ERCC5R4GMW8 1640 aa12.05□□□□□ -0.48
FAM71F1-206ENST00000484425 FANCD2Q9BXW9 1451 aa12.02□□□□□ -0.48
FAM71F1-206ENST00000484425 NESP48681 1621 aa12.02□□□□□ -0.49
FAM71F1-206ENST00000484425 CUX1P39880 1505 aa12□□□□□ -0.49
FAM71F1-206ENST00000484425 EEA1Q15075 1411 aa12□□□□□ -0.49
FAM71F1-206ENST00000484425 PDS5BQ9NTI5 1447 aa12□□□□□ -0.49
FAM71F1-206ENST00000484425 CEP164Q9UPV0 1460 aa11.96□□□□□ -0.49
FAM71F1-206ENST00000484425 FAM9AQ8IZU1 332 aaPredicted RBP11.95□□□□□ -0.5
FAM71F1-206ENST00000484425 SOGA1O94964 1423 aa11.93□□□□□ -0.5
FAM71F1-206ENST00000484425 DNMBPQ6XZF7 1577 aa11.93□□□□□ -0.5
FAM71F1-206ENST00000484425 KIF21AQ7Z4S6 1674 aa11.91□□□□□ -0.5
FAM71F1-206ENST00000484425 LOC105371045A0A1W2PR82 267 aa11.91□□□□□ -0.5
FAM71F1-206ENST00000484425 TOPBP1Q92547 1522 aa11.89□□□□□ -0.51
FAM71F1-206ENST00000484425 RUSC2Q8N2Y8 1516 aa11.89□□□□□ -0.51
FAM71F1-206ENST00000484425 FGD5Q6ZNL6 1462 aa11.88□□□□□ -0.51
FAM71F1-206ENST00000484425 URB2Q14146 1524 aaKnown RBP11.86□□□□□ -0.51
FAM71F1-206ENST00000484425 SLC4A2P04920 1241 aa11.86□□□□□ -0.51
FAM71F1-206ENST00000484425 KIF27Q86VH2 1401 aa11.85□□□□□ -0.51
FAM71F1-206ENST00000484425 MRC2Q9UBG0 1479 aa11.83□□□□□ -0.52
FAM71F1-206ENST00000484425 POLA1P09884 1462 aaPredicted RBP11.82□□□□□ -0.52
FAM71F1-206ENST00000484425 KIF21BO75037 1637 aa11.82□□□□□ -0.52
FAM71F1-206ENST00000484425 CUX2O14529 1486 aa11.79□□□□□ -0.52
FAM71F1-206ENST00000484425 GOLGA3Q08378 1498 aa11.79□□□□□ -0.52
FAM71F1-206ENST00000484425 ABCA10Q8WWZ4 1543 aa11.79□□□□□ -0.52
FAM71F1-206ENST00000484425 ERCC6Q03468 1493 aa11.78□□□□□ -0.52
FAM71F1-206ENST00000484425 WDR62O43379 1518 aa11.77□□□□□ -0.53
FAM71F1-206ENST00000484425 RAD54L2Q9Y4B4 1467 aa11.76□□□□□ -0.53
FAM71F1-206ENST00000484425 WDR97A6NE52 1622 aa11.76□□□□□ -0.53
FAM71F1-206ENST00000484425 ERICH3Q5RHP9 1530 aa11.75□□□□□ -0.53
FAM71F1-206ENST00000484425 TNIKQ9UKE5 1360 aa11.75□□□□□ -0.53
FAM71F1-206ENST00000484425 PRXQ9BXM0 1461 aa11.75□□□□□ -0.53
FAM71F1-206ENST00000484425 THOC2Q8NI27 1593 aaKnown RBP11.73□□□□□ -0.53
FAM71F1-206ENST00000484425 TARBP1Q13395 1621 aaKnown RBP11.73□□□□□ -0.53
FAM71F1-206ENST00000484425 IGF1RP08069 1367 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms