RNA–Protein interactions for RNA: ENST00000483930.1

CTSS-205, Transcript of cathepsin S, humanhuman

TSL 5

Gene CTSS, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-205ENST00000483930 AEBP2Q6ZN18 517 aaPredicted RBP31.56■■■□□ 2.64
CTSS-205ENST00000483930 CHIC1Q5VXU3 224 aa29.67■■■□□ 2.34
CTSS-205ENST00000483930 SENP3Q9H4L4 574 aaPredicted RBP27.06■■□□□ 1.92
CTSS-205ENST00000483930 NISCHQ9Y2I1 1504 aa27■■□□□ 1.91
CTSS-205ENST00000483930 PHF23Q9BUL5 403 aaPredicted RBP26.63■■□□□ 1.85
CTSS-205ENST00000483930 FOXD1Q16676 465 aa25.21■■□□□ 1.63
CTSS-205ENST00000483930 ABCC9O60706 1549 aa24.3■■□□□ 1.48
CTSS-205ENST00000483930 CCDC180Q9P1Z9 1646 aa24.21■■□□□ 1.47
CTSS-205ENST00000483930 MSH5O43196 834 aa23.81■■□□□ 1.4
CTSS-205ENST00000483930 POTEDQ86YR6 584 aa23.79■■□□□ 1.4
CTSS-205ENST00000483930 PLPPR3Q6T4P5 718 aa23.58■■□□□ 1.37
CTSS-205ENST00000483930 PIAS4Q8N2W9 510 aaPredicted RBP23.5■■□□□ 1.35
CTSS-205ENST00000483930 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
CTSS-205ENST00000483930 ADRA2BP18089 450 aa23.19■■□□□ 1.3
CTSS-205ENST00000483930 RB1CC1Q8TDY2 1594 aa23.1■■□□□ 1.29
CTSS-205ENST00000483930 DCAF8L2P0C7V8 631 aa22.95■■□□□ 1.26
CTSS-205ENST00000483930 NACADO15069 1562 aa22.93■■□□□ 1.26
CTSS-205ENST00000483930 DNAJC5BQ9UF47 199 aa22.87■■□□□ 1.25
CTSS-205ENST00000483930 PABPN1Q86U42 306 aaKnown RBP eCLIP22.66■■□□□ 1.22
CTSS-205ENST00000483930 MYO15BQ96JP2 1530 aa22.59■■□□□ 1.21
CTSS-205ENST00000483930 UNC13AQ9UPW8 1703 aa22.57■■□□□ 1.2
CTSS-205ENST00000483930 BICRAQ9NZM4 1560 aa22.4■■□□□ 1.18
CTSS-205ENST00000483930 ZCCHC6Q5VYS8 1495 aaKnown RBP22.33■■□□□ 1.16
CTSS-205ENST00000483930 DCAF1Q9Y4B6 1507 aa22.28■■□□□ 1.16
CTSS-205ENST00000483930 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
CTSS-205ENST00000483930 SCRIBQ14160 1630 aa22.07■■□□□ 1.12
CTSS-205ENST00000483930 CC2D2AQ9P2K1 1620 aa21.94■■□□□ 1.1
CTSS-205ENST00000483930 CECR2Q9BXF3 1484 aa21.89■■□□□ 1.09
CTSS-205ENST00000483930 EIF4G1Q04637 1599 aaKnown RBP21.86■■□□□ 1.09
CTSS-205ENST00000483930 MAPK8IP2Q13387 824 aaPredicted RBP21.4■■□□□ 1.02
CTSS-205ENST00000483930 DMRT2Q9Y5R5 561 aa21.38■■□□□ 1.01
CTSS-205ENST00000483930 SCAF1Q9H7N4 1312 aaKnown RBP21.32■■□□□ 1
CTSS-205ENST00000483930 NCAPD3P42695 1498 aa21.19■□□□□ 0.98
CTSS-205ENST00000483930 ATAD2BQ9ULI0 1458 aa21.1■□□□□ 0.97
CTSS-205ENST00000483930 SMARCA4P51532 1647 aa21.05■□□□□ 0.96
CTSS-205ENST00000483930 DNAJC5Q9H3Z4 198 aa21.05■□□□□ 0.96
CTSS-205ENST00000483930 SMARCA2P51531 1590 aa21.05■□□□□ 0.96
CTSS-205ENST00000483930 ERCC6Q03468 1493 aa21■□□□□ 0.95
CTSS-205ENST00000483930 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
CTSS-205ENST00000483930 BAZ1AQ9NRL2 1556 aaPredicted RBP20.96■□□□□ 0.95
CTSS-205ENST00000483930 CUX2O14529 1486 aa20.94■□□□□ 0.94
CTSS-205ENST00000483930 BAZ1BQ9UIG0 1483 aaKnown RBP20.9■□□□□ 0.94
CTSS-205ENST00000483930 NESP48681 1621 aa20.85■□□□□ 0.93
CTSS-205ENST00000483930 PEG3Q9GZU2 1588 aa20.84■□□□□ 0.93
CTSS-205ENST00000483930 MROH2BQ7Z745 1585 aa20.8■□□□□ 0.92
CTSS-205ENST00000483930 LAMC3Q9Y6N6 1575 aa20.7■□□□□ 0.9
CTSS-205ENST00000483930 CACNB1Q02641 598 aaPredicted RBP20.63■□□□□ 0.89
CTSS-205ENST00000483930 PDS5BQ9NTI5 1447 aa20.62■□□□□ 0.89
CTSS-205ENST00000483930 THOC2Q8NI27 1593 aaKnown RBP20.59■□□□□ 0.89
CTSS-205ENST00000483930 PPP4R3CPQ6ZMV5 832 aa20.59■□□□□ 0.89
CTSS-205ENST00000483930 KIF21AQ7Z4S6 1674 aa20.57■□□□□ 0.88
CTSS-205ENST00000483930 WIZO95785 1651 aa20.56■□□□□ 0.88
CTSS-205ENST00000483930 CADPSQ9ULU8 1353 aa20.56■□□□□ 0.88
CTSS-205ENST00000483930 DCAF8L1A6NGE4 600 aa20.54■□□□□ 0.88
CTSS-205ENST00000483930 HOXD11P31277 338 aaPredicted RBP20.46■□□□□ 0.87
CTSS-205ENST00000483930 MRC2Q9UBG0 1479 aa20.4■□□□□ 0.86
CTSS-205ENST00000483930 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
CTSS-205ENST00000483930 WDR62O43379 1518 aa20.32■□□□□ 0.84
CTSS-205ENST00000483930 CNKSR2Q8WXI2 1034 aa20.32■□□□□ 0.84
CTSS-205ENST00000483930 CEP164Q9UPV0 1460 aa20.31■□□□□ 0.84
CTSS-205ENST00000483930 FANCD2Q9BXW9 1451 aa20.3■□□□□ 0.84
CTSS-205ENST00000483930 CFTRP13569 1480 aa20.28■□□□□ 0.84
CTSS-205ENST00000483930 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.83
CTSS-205ENST00000483930 RNF39Q9H2S5 420 aa20.24■□□□□ 0.83
CTSS-205ENST00000483930 RNF216Q9NWF9 866 aaPredicted RBP20.23■□□□□ 0.83
CTSS-205ENST00000483930 TRIM41Q8WV44 630 aa20.12■□□□□ 0.81
CTSS-205ENST00000483930 URB2Q14146 1524 aaKnown RBP20.12■□□□□ 0.81
CTSS-205ENST00000483930 CCDC88BA6NC98 1476 aa20.09■□□□□ 0.81
CTSS-205ENST00000483930 OSCARQ8IYS5 282 aa20.08■□□□□ 0.81
CTSS-205ENST00000483930 PRDM2Q13029 1718 aa20.07■□□□□ 0.8
CTSS-205ENST00000483930 C1QBPQ07021 282 aaKnown RBP19.96■□□□□ 0.79
CTSS-205ENST00000483930 IFT140Q96RY7 1462 aa19.92■□□□□ 0.78
CTSS-205ENST00000483930 TOPBP1Q92547 1522 aa19.91■□□□□ 0.78
CTSS-205ENST00000483930 ABCC8Q09428 1581 aa19.9■□□□□ 0.78
CTSS-205ENST00000483930 ZNF608Q9ULD9 1512 aaPredicted RBP19.88■□□□□ 0.77
CTSS-205ENST00000483930 DNMBPQ6XZF7 1577 aa19.82■□□□□ 0.76
CTSS-205ENST00000483930 NCBP3Q53F19 620 aaKnown RBP19.75■□□□□ 0.75
CTSS-205ENST00000483930 EIF4G3O43432 1585 aaKnown RBP19.74■□□□□ 0.75
CTSS-205ENST00000483930 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.75
CTSS-205ENST00000483930 RIMBP3CA6NJZ7 1639 aa19.73■□□□□ 0.75
CTSS-205ENST00000483930 RIMBP3BA6NNM3 1639 aa19.73■□□□□ 0.75
CTSS-205ENST00000483930 RIMBP3Q9UFD9 1639 aa19.73■□□□□ 0.75
CTSS-205ENST00000483930 TARBP1Q13395 1621 aaKnown RBP19.72■□□□□ 0.75
CTSS-205ENST00000483930 POLA1P09884 1462 aaPredicted RBP19.69■□□□□ 0.74
CTSS-205ENST00000483930 FBLN2P98095 1184 aa19.68■□□□□ 0.74
CTSS-205ENST00000483930 SOGA1O94964 1423 aa19.66■□□□□ 0.74
CTSS-205ENST00000483930 ARHGEF11O15085 1522 aa19.65■□□□□ 0.74
CTSS-205ENST00000483930 RAD54L2Q9Y4B4 1467 aa19.64■□□□□ 0.73
CTSS-205ENST00000483930 CHD1O14646 1710 aa19.63■□□□□ 0.73
CTSS-205ENST00000483930 TDRD9Q8NDG6 1382 aaKnown RBP19.62■□□□□ 0.73
CTSS-205ENST00000483930 CYB5RLQ6IPT4 315 aa19.61■□□□□ 0.73
CTSS-205ENST00000483930 FGD5Q6ZNL6 1462 aa19.56■□□□□ 0.72
CTSS-205ENST00000483930 CUX1P39880 1505 aa19.53■□□□□ 0.72
CTSS-205ENST00000483930 SUPT5HO00267 1087 aaKnown RBP19.53■□□□□ 0.72
CTSS-205ENST00000483930 CHMP7Q8WUX9 453 aaPredicted RBP19.52■□□□□ 0.72
CTSS-205ENST00000483930 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.51■□□□□ 0.71
CTSS-205ENST00000483930 WDR97A6NE52 1622 aa19.51■□□□□ 0.71
CTSS-205ENST00000483930 SNAPC4Q5SXM2 1469 aa19.48■□□□□ 0.71
CTSS-205ENST00000483930 GRIN2BQ13224 1484 aa19.46■□□□□ 0.71
CTSS-205ENST00000483930 MAGI1Q96QZ7 1491 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms