RNA–Protein interactions for RNA: ENST00000482690.1

NUP98-210, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-210ENST00000482690 DNAJC5BQ9UF47 199 aa10.73□□□□□ -0.69
NUP98-210ENST00000482690 DNAJC5Q9H3Z4 198 aa10.71□□□□□ -0.69
NUP98-210ENST00000482690 ABCC9O60706 1549 aa10.17□□□□□ -0.78
NUP98-210ENST00000482690 TRIM41Q8WV44 630 aa9.69□□□□□ -0.86
NUP98-210ENST00000482690 NISCHQ9Y2I1 1504 aa9.46□□□□□ -0.89
NUP98-210ENST00000482690 ILDR1Q86SU0 546 aaPredicted RBP9.43□□□□□ -0.9
NUP98-210ENST00000482690 AEBP2Q6ZN18 517 aaPredicted RBP9.42□□□□□ -0.9
NUP98-210ENST00000482690 CECR2Q9BXF3 1484 aa9.28□□□□□ -0.92
NUP98-210ENST00000482690 PABPN1Q86U42 306 aaKnown RBP eCLIP9.25□□□□□ -0.93
NUP98-210ENST00000482690 CUX2O14529 1486 aa9.25□□□□□ -0.93
NUP98-210ENST00000482690 CC2D2AQ9P2K1 1620 aa9.11□□□□□ -0.95
NUP98-210ENST00000482690 RB1CC1Q8TDY2 1594 aa9.06□□□□□ -0.96
NUP98-210ENST00000482690 BICRAQ9NZM4 1560 aa8.94□□□□□ -0.98
NUP98-210ENST00000482690 UNC13AQ9UPW8 1703 aa8.9□□□□□ -0.98
NUP98-210ENST00000482690 CCDC180Q9P1Z9 1646 aa8.88□□□□□ -0.99
NUP98-210ENST00000482690 SOCS7O14512 581 aa8.82□□□□□ -1
NUP98-210ENST00000482690 ERCC6Q03468 1493 aa8.82□□□□□ -1
NUP98-210ENST00000482690 LMTK3Q96Q04 1460 aa8.8□□□□□ -1
NUP98-210ENST00000482690 EIF4G1Q04637 1599 aaKnown RBP8.78□□□□□ -1
NUP98-210ENST00000482690 TRHP20396 242 aaPredicted RBP8.77□□□□□ -1.01
NUP98-210ENST00000482690 ILDR2Q71H61 639 aa8.71□□□□□ -1.02
NUP98-210ENST00000482690 NACADO15069 1562 aa8.69□□□□□ -1.02
NUP98-210ENST00000482690 RIMBP3CA6NJZ7 1639 aa8.67□□□□□ -1.02
NUP98-210ENST00000482690 RIMBP3BA6NNM3 1639 aa8.67□□□□□ -1.02
NUP98-210ENST00000482690 RIMBP3Q9UFD9 1639 aa8.67□□□□□ -1.02
NUP98-210ENST00000482690 SHROOM4Q9ULL8 1493 aa8.6□□□□□ -1.03
NUP98-210ENST00000482690 FBXO41Q8TF61 875 aa8.59□□□□□ -1.03
NUP98-210ENST00000482690 OSCARQ8IYS5 282 aa8.58□□□□□ -1.04
NUP98-210ENST00000482690 THOC2Q8NI27 1593 aaKnown RBP8.56□□□□□ -1.04
NUP98-210ENST00000482690 BAZ1AQ9NRL2 1556 aaPredicted RBP8.55□□□□□ -1.04
NUP98-210ENST00000482690 ARHGEF11O15085 1522 aa8.52□□□□□ -1.05
NUP98-210ENST00000482690 CYB5RLQ6IPT4 315 aa8.49□□□□□ -1.05
NUP98-210ENST00000482690 DISP3Q9P2K9 1392 aa8.46□□□□□ -1.06
NUP98-210ENST00000482690 ERCC6L2Q5T890 1561 aa8.45□□□□□ -1.06
NUP98-210ENST00000482690 KDM4FA0A1W2PPD8 638 aa8.42□□□□□ -1.06
NUP98-210ENST00000482690 NESP48681 1621 aa8.4□□□□□ -1.07
NUP98-210ENST00000482690 ARAP1Q96P48 1450 aa8.37□□□□□ -1.07
NUP98-210ENST00000482690 SMARCA2P51531 1590 aa8.34□□□□□ -1.07
NUP98-210ENST00000482690 HECW2Q9P2P5 1572 aa8.34□□□□□ -1.07
NUP98-210ENST00000482690 DCAF8L2P0C7V8 631 aa8.33□□□□□ -1.08
NUP98-210ENST00000482690 SPATA31D1Q6ZQQ2 1576 aa8.24□□□□□ -1.09
NUP98-210ENST00000482690 SYNJ2O15056 1496 aa8.21□□□□□ -1.09
NUP98-210ENST00000482690 KIF21AQ7Z4S6 1674 aa8.21□□□□□ -1.1
NUP98-210ENST00000482690 MYO15BQ96JP2 1530 aa8.17□□□□□ -1.1
NUP98-210ENST00000482690 SCRIBQ14160 1630 aa8.14□□□□□ -1.11
NUP98-210ENST00000482690 WDR62O43379 1518 aa8.13□□□□□ -1.11
NUP98-210ENST00000482690 MRC2Q9UBG0 1479 aa8.09□□□□□ -1.11
NUP98-210ENST00000482690 NCAPD3P42695 1498 aa8.07□□□□□ -1.12
NUP98-210ENST00000482690 LAMC3Q9Y6N6 1575 aa8.06□□□□□ -1.12
NUP98-210ENST00000482690 RSF1Q96T23 1441 aaPredicted RBP8.04□□□□□ -1.12
NUP98-210ENST00000482690 PDS5BQ9NTI5 1447 aa8.04□□□□□ -1.12
NUP98-210ENST00000482690 ADGRL1O94910 1474 aa8.03□□□□□ -1.12
NUP98-210ENST00000482690 KIF13AQ9H1H9 1805 aa7.94□□□□□ -1.14
NUP98-210ENST00000482690 KDM6BO15054 1643 aa7.89□□□□□ -1.15
NUP98-210ENST00000482690 CERKQ8TCT0 537 aa7.89□□□□□ -1.15
NUP98-210ENST00000482690 HMGXB3Q12766 1538 aa7.88□□□□□ -1.15
NUP98-210ENST00000482690 CHD1O14646 1710 aa7.88□□□□□ -1.15
NUP98-210ENST00000482690 ATAD2BQ9ULI0 1458 aa7.87□□□□□ -1.15
NUP98-210ENST00000482690 ZNF608Q9ULD9 1512 aaPredicted RBP7.85□□□□□ -1.15
NUP98-210ENST00000482690 CLASP1Q7Z460 1538 aa7.8□□□□□ -1.16
NUP98-210ENST00000482690 SMARCA4P51532 1647 aa7.8□□□□□ -1.16
NUP98-210ENST00000482690 GAPVD1Q14C86 1478 aa7.8□□□□□ -1.16
NUP98-210ENST00000482690 IFFO2Q5TF58 517 aa7.79□□□□□ -1.16
NUP98-210ENST00000482690 SRCAPQ6ZRS2 3230 aa7.78□□□□□ -1.16
NUP98-210ENST00000482690 CEP164Q9UPV0 1460 aa7.78□□□□□ -1.16
NUP98-210ENST00000482690 CADPSQ9ULU8 1353 aa7.75□□□□□ -1.17
NUP98-210ENST00000482690 URB2Q14146 1524 aaKnown RBP7.73□□□□□ -1.17
NUP98-210ENST00000482690 FBLN2P98095 1184 aa7.73□□□□□ -1.17
NUP98-210ENST00000482690 FAM69CQ0P6D2 419 aa7.72□□□□□ -1.17
NUP98-210ENST00000482690 EIF4G3O43432 1585 aaKnown RBP7.71□□□□□ -1.17
NUP98-210ENST00000482690 ABCC10Q5T3U5 1492 aa7.7□□□□□ -1.18
NUP98-210ENST00000482690 BAZ1BQ9UIG0 1483 aaKnown RBP7.7□□□□□ -1.18
NUP98-210ENST00000482690 IFT140Q96RY7 1462 aa7.68□□□□□ -1.18
NUP98-210ENST00000482690 FANCD2Q9BXW9 1451 aa7.68□□□□□ -1.18
NUP98-210ENST00000482690 SNAPC4Q5SXM2 1469 aa7.67□□□□□ -1.18
NUP98-210ENST00000482690 MED1Q15648 1581 aaPredicted RBP7.67□□□□□ -1.18
NUP98-210ENST00000482690 DIP2BQ9P265 1576 aa7.67□□□□□ -1.18
NUP98-210ENST00000482690 PCF11O94913 1555 aaKnown RBP7.66□□□□□ -1.18
NUP98-210ENST00000482690 TOP2BQ02880 1626 aa7.66□□□□□ -1.18
NUP98-210ENST00000482690 TSPOAP1O95153 1857 aa7.63□□□□□ -1.19
NUP98-210ENST00000482690 SYNJ1O43426 1573 aa7.61□□□□□ -1.19
NUP98-210ENST00000482690 DCAF1Q9Y4B6 1507 aa7.59□□□□□ -1.19
NUP98-210ENST00000482690 AQRO60306 1485 aaKnown RBP eCLIP7.59□□□□□ -1.191e-7■■■■■ 38.9
NUP98-210ENST00000482690 COL17A1Q9UMD9 1497 aaPredicted RBP7.56□□□□□ -1.2
NUP98-210ENST00000482690 HSPA2P54652 639 aa7.56□□□□□ -1.2
NUP98-210ENST00000482690 PTPRMP28827 1452 aa7.55□□□□□ -1.2
NUP98-210ENST00000482690 MAPKBP1O60336 1514 aa7.54□□□□□ -1.2
NUP98-210ENST00000482690 PHF23Q9BUL5 403 aaPredicted RBP7.5□□□□□ -1.21
NUP98-210ENST00000482690 PPRC1Q5VV67 1664 aaKnown RBP7.49□□□□□ -1.21
NUP98-210ENST00000482690 PEG3Q9GZU2 1588 aa7.48□□□□□ -1.21
NUP98-210ENST00000482690 ZCCHC6Q5VYS8 1495 aaKnown RBP7.46□□□□□ -1.22
NUP98-210ENST00000482690 LTBP4Q8N2S1 1624 aa7.45□□□□□ -1.22
NUP98-210ENST00000482690 CHIC1Q5VXU3 224 aa7.45□□□□□ -1.22
NUP98-210ENST00000482690 CHMP7Q8WUX9 453 aaPredicted RBP7.45□□□□□ -1.22
NUP98-210ENST00000482690 TARBP1Q13395 1621 aaKnown RBP7.45□□□□□ -1.22
NUP98-210ENST00000482690 IQSEC2Q5JU85 1478 aa7.43□□□□□ -1.22
NUP98-210ENST00000482690 ADAMTSL3P82987 1691 aa7.42□□□□□ -1.22
NUP98-210ENST00000482690 RGS17Q9UGC6 210 aaPredicted RBP7.42□□□□□ -1.22
NUP98-210ENST00000482690 CFTRP13569 1480 aa7.42□□□□□ -1.22
NUP98-210ENST00000482690 CEP170Q5SW79 1584 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms