RNA–Protein interactions for RNA: ENST00000481631.1

DHFR2-204, Transcript of dihydrofolate reductase 2, humanhuman

TSL 3

Gene DHFR2, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-204ENST00000481631 AEBP2Q6ZN18 517 aaPredicted RBP29.17■■■□□ 2.26
DHFR2-204ENST00000481631 CHIC1Q5VXU3 224 aa27.8■■■□□ 2.04
DHFR2-204ENST00000481631 SENP3Q9H4L4 574 aaPredicted RBP24.9■■□□□ 1.58
DHFR2-204ENST00000481631 PHF23Q9BUL5 403 aaPredicted RBP24.56■■□□□ 1.52
DHFR2-204ENST00000481631 FOXD1Q16676 465 aa23.17■■□□□ 1.3
DHFR2-204ENST00000481631 NISCHQ9Y2I1 1504 aa22.54■■□□□ 1.2
DHFR2-204ENST00000481631 PLPPR3Q6T4P5 718 aa22.25■■□□□ 1.15
DHFR2-204ENST00000481631 ABCC9O60706 1549 aa21.97■■□□□ 1.11
DHFR2-204ENST00000481631 PPP6R1Q9UPN7 881 aa21.71■■□□□ 1.07
DHFR2-204ENST00000481631 MSH5O43196 834 aa21.69■■□□□ 1.06
DHFR2-204ENST00000481631 PIAS4Q8N2W9 510 aaPredicted RBP21.66■■□□□ 1.06
DHFR2-204ENST00000481631 DNAJC5BQ9UF47 199 aa21.63■■□□□ 1.05
DHFR2-204ENST00000481631 ADRA2BP18089 450 aa21.62■■□□□ 1.05
DHFR2-204ENST00000481631 POTEDQ86YR6 584 aa21.01■□□□□ 0.95
DHFR2-204ENST00000481631 CCDC180Q9P1Z9 1646 aa20.83■□□□□ 0.93
DHFR2-204ENST00000481631 DNAJC5Q9H3Z4 198 aa20.8■□□□□ 0.92
DHFR2-204ENST00000481631 RB1CC1Q8TDY2 1594 aa20.41■□□□□ 0.86
DHFR2-204ENST00000481631 PABPN1Q86U42 306 aaKnown RBP eCLIP20.22■□□□□ 0.83
DHFR2-204ENST00000481631 UNC13AQ9UPW8 1703 aa19.96■□□□□ 0.79
DHFR2-204ENST00000481631 NACADO15069 1562 aa19.95■□□□□ 0.78
DHFR2-204ENST00000481631 CECR2Q9BXF3 1484 aa19.93■□□□□ 0.78
DHFR2-204ENST00000481631 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
DHFR2-204ENST00000481631 BICRAQ9NZM4 1560 aa19.83■□□□□ 0.77
DHFR2-204ENST00000481631 MAPK8IP2Q13387 824 aaPredicted RBP19.83■□□□□ 0.77
DHFR2-204ENST00000481631 CC2D2AQ9P2K1 1620 aa19.81■□□□□ 0.76
DHFR2-204ENST00000481631 DMRT2Q9Y5R5 561 aa19.76■□□□□ 0.75
DHFR2-204ENST00000481631 DCAF8L2P0C7V8 631 aa19.52■□□□□ 0.72
DHFR2-204ENST00000481631 PPP4R3CPQ6ZMV5 832 aa19.49■□□□□ 0.71
DHFR2-204ENST00000481631 CUX2O14529 1486 aa19.48■□□□□ 0.71
DHFR2-204ENST00000481631 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
DHFR2-204ENST00000481631 EIF4G1Q04637 1599 aaKnown RBP19.46■□□□□ 0.71
DHFR2-204ENST00000481631 TRIM41Q8WV44 630 aa19.4■□□□□ 0.7
DHFR2-204ENST00000481631 MYO15BQ96JP2 1530 aa19.25■□□□□ 0.67
DHFR2-204ENST00000481631 CNKSR2Q8WXI2 1034 aa19.13■□□□□ 0.65
DHFR2-204ENST00000481631 ERCC6Q03468 1493 aa19.09■□□□□ 0.65
DHFR2-204ENST00000481631 HOXD11P31277 338 aaPredicted RBP19.09■□□□□ 0.65
DHFR2-204ENST00000481631 RNF216Q9NWF9 866 aaPredicted RBP18.95■□□□□ 0.62
DHFR2-204ENST00000481631 SCRIBQ14160 1630 aa18.89■□□□□ 0.61
DHFR2-204ENST00000481631 DCAF8L1A6NGE4 600 aa18.84■□□□□ 0.61
DHFR2-204ENST00000481631 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
DHFR2-204ENST00000481631 THOC2Q8NI27 1593 aaKnown RBP18.63■□□□□ 0.57
DHFR2-204ENST00000481631 DCAF1Q9Y4B6 1507 aa18.55■□□□□ 0.56
DHFR2-204ENST00000481631 NESP48681 1621 aa18.52■□□□□ 0.55
DHFR2-204ENST00000481631 CACNB1Q02641 598 aaPredicted RBP18.51■□□□□ 0.55
DHFR2-204ENST00000481631 RNF39Q9H2S5 420 aa18.51■□□□□ 0.55
DHFR2-204ENST00000481631 NPM3O75607 178 aaKnown RBP18.5■□□□□ 0.55
DHFR2-204ENST00000481631 ZCCHC6Q5VYS8 1495 aaKnown RBP18.44■□□□□ 0.54
DHFR2-204ENST00000481631 SMARCA2P51531 1590 aa18.4■□□□□ 0.54
DHFR2-204ENST00000481631 NCAPD3P42695 1498 aa18.39■□□□□ 0.54
DHFR2-204ENST00000481631 BAZ1AQ9NRL2 1556 aaPredicted RBP18.39■□□□□ 0.53
DHFR2-204ENST00000481631 OSCARQ8IYS5 282 aa18.32■□□□□ 0.52
DHFR2-204ENST00000481631 KIF21AQ7Z4S6 1674 aa18.28■□□□□ 0.52
DHFR2-204ENST00000481631 RIMBP3CA6NJZ7 1639 aa18.28■□□□□ 0.52
DHFR2-204ENST00000481631 RIMBP3BA6NNM3 1639 aa18.28■□□□□ 0.52
DHFR2-204ENST00000481631 RIMBP3Q9UFD9 1639 aa18.28■□□□□ 0.52
DHFR2-204ENST00000481631 C1QBPQ07021 282 aaKnown RBP18.26■□□□□ 0.51
DHFR2-204ENST00000481631 LAMC3Q9Y6N6 1575 aa18.22■□□□□ 0.51
DHFR2-204ENST00000481631 TRHP20396 242 aaPredicted RBP18.2■□□□□ 0.5
DHFR2-204ENST00000481631 HMGXB3Q12766 1538 aa18.19■□□□□ 0.5
DHFR2-204ENST00000481631 KCNA4P22459 653 aa18.19■□□□□ 0.5
DHFR2-204ENST00000481631 ATAD2BQ9ULI0 1458 aa18.18■□□□□ 0.5
DHFR2-204ENST00000481631 PDS5BQ9NTI5 1447 aa18.14■□□□□ 0.49
DHFR2-204ENST00000481631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.11■□□□□ 0.49
DHFR2-204ENST00000481631 ARHGEF11O15085 1522 aa18.08■□□□□ 0.49
DHFR2-204ENST00000481631 WDR62O43379 1518 aa18.08■□□□□ 0.48
DHFR2-204ENST00000481631 MRC2Q9UBG0 1479 aa18.07■□□□□ 0.48
DHFR2-204ENST00000481631 ILDR1Q86SU0 546 aaPredicted RBP18.02■□□□□ 0.48
DHFR2-204ENST00000481631 CYB5RLQ6IPT4 315 aa17.97■□□□□ 0.47
DHFR2-204ENST00000481631 BAZ1BQ9UIG0 1483 aaKnown RBP17.96■□□□□ 0.47
DHFR2-204ENST00000481631 SMARCA4P51532 1647 aa17.88■□□□□ 0.45
DHFR2-204ENST00000481631 ARAP1Q96P48 1450 aa17.82■□□□□ 0.44
DHFR2-204ENST00000481631 U3KPZ7 1027 aaPredicted RBP17.78■□□□□ 0.44
DHFR2-204ENST00000481631 CADPSQ9ULU8 1353 aa17.78■□□□□ 0.44
DHFR2-204ENST00000481631 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
DHFR2-204ENST00000481631 PEG3Q9GZU2 1588 aa17.7■□□□□ 0.42
DHFR2-204ENST00000481631 SLC4A2P04920 1241 aa17.65■□□□□ 0.42
DHFR2-204ENST00000481631 FANCD2Q9BXW9 1451 aa17.61■□□□□ 0.41
DHFR2-204ENST00000481631 RSF1Q96T23 1441 aaPredicted RBP17.58■□□□□ 0.41
DHFR2-204ENST00000481631 URB2Q14146 1524 aaKnown RBP17.54■□□□□ 0.4
DHFR2-204ENST00000481631 CHD1O14646 1710 aa17.52■□□□□ 0.4
DHFR2-204ENST00000481631 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.39
DHFR2-204ENST00000481631 SPINK5Q9NQ38 1064 aaPredicted RBP17.47■□□□□ 0.39
DHFR2-204ENST00000481631 IFT140Q96RY7 1462 aa17.44■□□□□ 0.38
DHFR2-204ENST00000481631 CAPN15O75808 1086 aa17.42■□□□□ 0.38
DHFR2-204ENST00000481631 EIF4G3O43432 1585 aaKnown RBP17.4■□□□□ 0.38
DHFR2-204ENST00000481631 MROH2BQ7Z745 1585 aa17.36■□□□□ 0.37
DHFR2-204ENST00000481631 DSG3P32926 999 aa17.34■□□□□ 0.37
DHFR2-204ENST00000481631 CFTRP13569 1480 aa17.32■□□□□ 0.36
DHFR2-204ENST00000481631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.32■□□□□ 0.36
DHFR2-204ENST00000481631 FBLN2P98095 1184 aa17.32■□□□□ 0.36
DHFR2-204ENST00000481631 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
DHFR2-204ENST00000481631 APLP2Q06481 763 aa17.31■□□□□ 0.36
DHFR2-204ENST00000481631 KDM4FA0A1W2PPD8 638 aa17.27■□□□□ 0.36
DHFR2-204ENST00000481631 CLASP1Q7Z460 1538 aa17.26■□□□□ 0.35
DHFR2-204ENST00000481631 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
DHFR2-204ENST00000481631 ERCC6L2Q5T890 1561 aa17.19■□□□□ 0.34
DHFR2-204ENST00000481631 ZNF219Q9P2Y4 722 aaPredicted RBP17.19■□□□□ 0.34
DHFR2-204ENST00000481631 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.34
DHFR2-204ENST00000481631 SLC4A1APQ9BWU0 796 aaKnown RBP17.18■□□□□ 0.34
DHFR2-204ENST00000481631 GAPVD1Q14C86 1478 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms