RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 AEBP2Q6ZN18 517 aaPredicted RBP26.97■■□□□ 1.91
LINC00173-203ENST00000480237 CHIC1Q5VXU3 224 aa26.31■■□□□ 1.8
LINC00173-203ENST00000480237 NISCHQ9Y2I1 1504 aa23.97■■□□□ 1.43
LINC00173-203ENST00000480237 PHF23Q9BUL5 403 aaPredicted RBP23.17■■□□□ 1.3
LINC00173-203ENST00000480237 SENP3Q9H4L4 574 aaPredicted RBP22.86■■□□□ 1.25
LINC00173-203ENST00000480237 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.01
LINC00173-203ENST00000480237 FOXD1Q16676 465 aa21.24■□□□□ 0.99
LINC00173-203ENST00000480237 CCDC180Q9P1Z9 1646 aa21.21■□□□□ 0.99
LINC00173-203ENST00000480237 ADRA2BP18089 450 aa20.46■□□□□ 0.87
LINC00173-203ENST00000480237 PPP6R1Q9UPN7 881 aa20.46■□□□□ 0.87
LINC00173-203ENST00000480237 ZCCHC6Q5VYS8 1495 aaKnown RBP20.14■□□□□ 0.81
LINC00173-203ENST00000480237 PIAS4Q8N2W9 510 aaPredicted RBP20.06■□□□□ 0.8
LINC00173-203ENST00000480237 ABCC9O60706 1549 aa19.88■□□□□ 0.77
LINC00173-203ENST00000480237 DCAF1Q9Y4B6 1507 aa19.84■□□□□ 0.77
LINC00173-203ENST00000480237 DCAF8L2P0C7V8 631 aa19.67■□□□□ 0.74
LINC00173-203ENST00000480237 MYO15BQ96JP2 1530 aa19.63■□□□□ 0.73
LINC00173-203ENST00000480237 NACADO15069 1562 aa19.6■□□□□ 0.73
LINC00173-203ENST00000480237 MSH5O43196 834 aa19.56■□□□□ 0.72
LINC00173-203ENST00000480237 RB1CC1Q8TDY2 1594 aa19.5■□□□□ 0.71
LINC00173-203ENST00000480237 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
LINC00173-203ENST00000480237 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.69
LINC00173-203ENST00000480237 SCRIBQ14160 1630 aa19.39■□□□□ 0.69
LINC00173-203ENST00000480237 BICRAQ9NZM4 1560 aa18.88■□□□□ 0.61
LINC00173-203ENST00000480237 PPP4R3CPQ6ZMV5 832 aa18.86■□□□□ 0.61
LINC00173-203ENST00000480237 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
LINC00173-203ENST00000480237 PABPN1Q86U42 306 aaKnown RBP eCLIP18.59■□□□□ 0.57
LINC00173-203ENST00000480237 MAPK8IP2Q13387 824 aaPredicted RBP18.58■□□□□ 0.56
LINC00173-203ENST00000480237 BAZ1AQ9NRL2 1556 aaPredicted RBP18.58■□□□□ 0.56
LINC00173-203ENST00000480237 SMARCA4P51532 1647 aa18.57■□□□□ 0.56
LINC00173-203ENST00000480237 CECR2Q9BXF3 1484 aa18.57■□□□□ 0.56
LINC00173-203ENST00000480237 SUPT5HO00267 1087 aaKnown RBP18.56■□□□□ 0.56
LINC00173-203ENST00000480237 MROH2BQ7Z745 1585 aa18.51■□□□□ 0.55
LINC00173-203ENST00000480237 WIZO95785 1651 aa18.49■□□□□ 0.55
LINC00173-203ENST00000480237 RSF1Q96T23 1441 aaPredicted RBP18.46■□□□□ 0.55
LINC00173-203ENST00000480237 KCNA4P22459 653 aa18.44■□□□□ 0.54
LINC00173-203ENST00000480237 NCBP3Q53F19 620 aaKnown RBP18.35■□□□□ 0.53
LINC00173-203ENST00000480237 EIF4G1Q04637 1599 aaKnown RBP18.32■□□□□ 0.52
LINC00173-203ENST00000480237 CNKSR2Q8WXI2 1034 aa18.31■□□□□ 0.52
LINC00173-203ENST00000480237 PEG3Q9GZU2 1588 aa18.3■□□□□ 0.52
LINC00173-203ENST00000480237 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
LINC00173-203ENST00000480237 TOP2AP11388 1531 aaKnown RBP18.24■□□□□ 0.51
LINC00173-203ENST00000480237 SMARCA2P51531 1590 aa18.23■□□□□ 0.51
LINC00173-203ENST00000480237 ATAD2BQ9ULI0 1458 aa18.12■□□□□ 0.49
LINC00173-203ENST00000480237 CC2D2AQ9P2K1 1620 aa18.11■□□□□ 0.49
LINC00173-203ENST00000480237 NPM3O75607 178 aaKnown RBP18.1■□□□□ 0.49
LINC00173-203ENST00000480237 BAZ1BQ9UIG0 1483 aaKnown RBP18.09■□□□□ 0.49
LINC00173-203ENST00000480237 HMGXB3Q12766 1538 aa18.08■□□□□ 0.48
LINC00173-203ENST00000480237 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
LINC00173-203ENST00000480237 PRDM2Q13029 1718 aa17.94■□□□□ 0.46
LINC00173-203ENST00000480237 CCDC88BA6NC98 1476 aa17.94■□□□□ 0.46
LINC00173-203ENST00000480237 RNF216Q9NWF9 866 aaPredicted RBP17.94■□□□□ 0.46
LINC00173-203ENST00000480237 HOXD11P31277 338 aaPredicted RBP17.85■□□□□ 0.45
LINC00173-203ENST00000480237 POTEDQ86YR6 584 aa17.83■□□□□ 0.45
LINC00173-203ENST00000480237 ABCC8Q09428 1581 aa17.64■□□□□ 0.41
LINC00173-203ENST00000480237 DCAF8L1A6NGE4 600 aa17.57■□□□□ 0.4
LINC00173-203ENST00000480237 SLC4A1APQ9BWU0 796 aaKnown RBP17.57■□□□□ 0.4
LINC00173-203ENST00000480237 CFTRP13569 1480 aa17.55■□□□□ 0.4
LINC00173-203ENST00000480237 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
LINC00173-203ENST00000480237 BIVM-ERCC5R4GMW8 1640 aa17.51■□□□□ 0.39
LINC00173-203ENST00000480237 SYNJ1O43426 1573 aa17.49■□□□□ 0.39
LINC00173-203ENST00000480237 KIF21AQ7Z4S6 1674 aa17.49■□□□□ 0.39
LINC00173-203ENST00000480237 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
LINC00173-203ENST00000480237 CADPSQ9ULU8 1353 aa17.46■□□□□ 0.39
LINC00173-203ENST00000480237 DNAJC5BQ9UF47 199 aa17.44■□□□□ 0.38
LINC00173-203ENST00000480237 TOP2BQ02880 1626 aa17.44■□□□□ 0.38
LINC00173-203ENST00000480237 WRNQ14191 1432 aaPredicted RBP eCLIP17.43■□□□□ 0.38
LINC00173-203ENST00000480237 NESP48681 1621 aa17.43■□□□□ 0.38
LINC00173-203ENST00000480237 FANCD2Q9BXW9 1451 aa17.36■□□□□ 0.37
LINC00173-203ENST00000480237 CUX1P39880 1505 aa17.34■□□□□ 0.37
LINC00173-203ENST00000480237 CEP164Q9UPV0 1460 aa17.31■□□□□ 0.36
LINC00173-203ENST00000480237 DNMBPQ6XZF7 1577 aa17.29■□□□□ 0.36
LINC00173-203ENST00000480237 PDS5BQ9NTI5 1447 aa17.26■□□□□ 0.35
LINC00173-203ENST00000480237 TOPBP1Q92547 1522 aa17.19■□□□□ 0.34
LINC00173-203ENST00000480237 WDR97A6NE52 1622 aa17.19■□□□□ 0.34
LINC00173-203ENST00000480237 FGD5Q6ZNL6 1462 aa17.17■□□□□ 0.34
LINC00173-203ENST00000480237 URB2Q14146 1524 aaKnown RBP17.16■□□□□ 0.34
LINC00173-203ENST00000480237 EEA1Q15075 1411 aa17.15■□□□□ 0.34
LINC00173-203ENST00000480237 FAM9AQ8IZU1 332 aaPredicted RBP17.15■□□□□ 0.34
LINC00173-203ENST00000480237 SOGA1O94964 1423 aa17.14■□□□□ 0.33
LINC00173-203ENST00000480237 EHMT2Q96KQ7 1210 aa17.13■□□□□ 0.33
LINC00173-203ENST00000480237 THOC2Q8NI27 1593 aaKnown RBP17.12■□□□□ 0.33
LINC00173-203ENST00000480237 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
LINC00173-203ENST00000480237 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
LINC00173-203ENST00000480237 ERCC6Q03468 1493 aa17.1■□□□□ 0.33
LINC00173-203ENST00000480237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.33
LINC00173-203ENST00000480237 SLC4A2P04920 1241 aa17.08■□□□□ 0.32
LINC00173-203ENST00000480237 KIF21BO75037 1637 aa17.08■□□□□ 0.32
LINC00173-203ENST00000480237 POLA1P09884 1462 aaPredicted RBP17.07■□□□□ 0.32
LINC00173-203ENST00000480237 WDR62O43379 1518 aa17.06■□□□□ 0.32
LINC00173-203ENST00000480237 PBRM1Q86U86 1689 aa17.04■□□□□ 0.32
LINC00173-203ENST00000480237 TARBP1Q13395 1621 aaKnown RBP17.02■□□□□ 0.32
LINC00173-203ENST00000480237 KIF27Q86VH2 1401 aa17■□□□□ 0.31
LINC00173-203ENST00000480237 CUX2O14529 1486 aa17■□□□□ 0.31
LINC00173-203ENST00000480237 ABCA5Q8WWZ7 1642 aa17■□□□□ 0.31
LINC00173-203ENST00000480237 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
LINC00173-203ENST00000480237 LOC105371045A0A1W2PR82 267 aa16.98■□□□□ 0.31
LINC00173-203ENST00000480237 RAD54L2Q9Y4B4 1467 aa16.98■□□□□ 0.31
LINC00173-203ENST00000480237 CUL7Q14999 1698 aa16.96■□□□□ 0.31
LINC00173-203ENST00000480237 ZBTB22O15209 634 aa16.96■□□□□ 0.31
LINC00173-203ENST00000480237 FOXD4L1Q9NU39 408 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms