RNA–Protein interactions for RNA: ENST00000479954.5

TTC21A-213, Transcript of tetratricopeptide repeat domain 21A, humanhuman

TSL 1 (best)

Gene TTC21A, Length 2,426 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC21A-213ENST00000479954 NISCHQ9Y2I1 1504 aa22.23■■□□□ 1.15
TTC21A-213ENST00000479954 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
TTC21A-213ENST00000479954 SUPT5HO00267 1087 aaKnown RBP19.01■□□□□ 0.63
TTC21A-213ENST00000479954 ABCC9O60706 1549 aa18.88■□□□□ 0.61
TTC21A-213ENST00000479954 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
TTC21A-213ENST00000479954 CCDC180Q9P1Z9 1646 aa18.77■□□□□ 0.6
TTC21A-213ENST00000479954 HRCP23327 699 aa18.67■□□□□ 0.58
TTC21A-213ENST00000479954 MYO15BQ96JP2 1530 aa18.66■□□□□ 0.58
TTC21A-213ENST00000479954 CHIC1Q5VXU3 224 aa18.62■□□□□ 0.57
TTC21A-213ENST00000479954 PCGF6Q9BYE7 350 aa18.42■□□□□ 0.54
TTC21A-213ENST00000479954 DCAF8L2P0C7V8 631 aa18.35■□□□□ 0.53
TTC21A-213ENST00000479954 DCAF1Q9Y4B6 1507 aa18.28■□□□□ 0.52
TTC21A-213ENST00000479954 PPARGC1BQ86YN6 1023 aaKnown RBP18.2■□□□□ 0.5
TTC21A-213ENST00000479954 LOC105371045A0A1W2PR82 267 aa18.08■□□□□ 0.49
TTC21A-213ENST00000479954 TRIM26Q12899 539 aaPredicted RBP18■□□□□ 0.47
TTC21A-213ENST00000479954 RB1CC1Q8TDY2 1594 aa17.92■□□□□ 0.46
TTC21A-213ENST00000479954 DNAJC5BQ9UF47 199 aa17.82■□□□□ 0.44
TTC21A-213ENST00000479954 ZEB1P37275 1124 aaPredicted RBP17.79■□□□□ 0.44
TTC21A-213ENST00000479954 NACADO15069 1562 aa17.75■□□□□ 0.43
TTC21A-213ENST00000479954 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
TTC21A-213ENST00000479954 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
TTC21A-213ENST00000479954 SCRIBQ14160 1630 aa17.66■□□□□ 0.42
TTC21A-213ENST00000479954 FAM9AQ8IZU1 332 aaPredicted RBP17.56■□□□□ 0.4
TTC21A-213ENST00000479954 PABPN1Q86U42 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
TTC21A-213ENST00000479954 PELP1Q8IZL8 1130 aaKnown RBP17.54■□□□□ 0.4
TTC21A-213ENST00000479954 UNC13AQ9UPW8 1703 aa17.43■□□□□ 0.38
TTC21A-213ENST00000479954 SCAF1Q9H7N4 1312 aaKnown RBP17.41■□□□□ 0.38
TTC21A-213ENST00000479954 EHMT2Q96KQ7 1210 aa17.41■□□□□ 0.38
TTC21A-213ENST00000479954 BICRAQ9NZM4 1560 aa17.34■□□□□ 0.37
TTC21A-213ENST00000479954 CECR2Q9BXF3 1484 aa17.31■□□□□ 0.36
TTC21A-213ENST00000479954 MROH2BQ7Z745 1585 aa17.3■□□□□ 0.36
TTC21A-213ENST00000479954 WIZO95785 1651 aa17.25■□□□□ 0.35
TTC21A-213ENST00000479954 CCER1Q8TC90 406 aaPredicted RBP17.21■□□□□ 0.35
TTC21A-213ENST00000479954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
TTC21A-213ENST00000479954 BAZ1AQ9NRL2 1556 aaPredicted RBP17.18■□□□□ 0.34
TTC21A-213ENST00000479954 EIF4G1Q04637 1599 aaKnown RBP17.16■□□□□ 0.34
TTC21A-213ENST00000479954 ACIN1Q9UKV3 1341 aaKnown RBP17.15■□□□□ 0.34
TTC21A-213ENST00000479954 NEUROD1Q13562 356 aa17.07■□□□□ 0.32
TTC21A-213ENST00000479954 DIEXFQ68CQ4 756 aaKnown RBP17.06■□□□□ 0.32
TTC21A-213ENST00000479954 WRNQ14191 1432 aaPredicted RBP eCLIP17.05■□□□□ 0.32
TTC21A-213ENST00000479954 CC2D2AQ9P2K1 1620 aa17.04■□□□□ 0.32
TTC21A-213ENST00000479954 CENPBP07199 599 aaPredicted RBP17.04■□□□□ 0.32
TTC21A-213ENST00000479954 ABCC8Q09428 1581 aa16.99■□□□□ 0.31
TTC21A-213ENST00000479954 CEP162Q5TB80 1403 aa16.98■□□□□ 0.31
TTC21A-213ENST00000479954 TOP2AP11388 1531 aaKnown RBP16.98■□□□□ 0.31
TTC21A-213ENST00000479954 CCDC88BA6NC98 1476 aa16.97■□□□□ 0.31
TTC21A-213ENST00000479954 GTF3C3Q9Y5Q9 886 aa16.96■□□□□ 0.31
TTC21A-213ENST00000479954 TTBK1Q5TCY1 1321 aaPredicted RBP16.95■□□□□ 0.3
TTC21A-213ENST00000479954 TNIKQ9UKE5 1360 aa16.92■□□□□ 0.3
TTC21A-213ENST00000479954 SMARCA2P51531 1590 aa16.89■□□□□ 0.29
TTC21A-213ENST00000479954 SMARCA4P51532 1647 aa16.88■□□□□ 0.29
TTC21A-213ENST00000479954 EEA1Q15075 1411 aa16.88■□□□□ 0.29
TTC21A-213ENST00000479954 SOGA1O94964 1423 aa16.87■□□□□ 0.29
TTC21A-213ENST00000479954 ZNF316A6NFI3 1004 aaPredicted RBP16.84■□□□□ 0.29
TTC21A-213ENST00000479954 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
TTC21A-213ENST00000479954 UBTFP17480 764 aaKnown RBP16.8■□□□□ 0.28
TTC21A-213ENST00000479954 GOLGA3Q08378 1498 aa16.79■□□□□ 0.28
TTC21A-213ENST00000479954 MYT1Q01538 1121 aa16.78■□□□□ 0.28
TTC21A-213ENST00000479954 RUSC2Q8N2Y8 1516 aa16.77■□□□□ 0.27
TTC21A-213ENST00000479954 YTHDC1Q96MU7 727 aaKnown RBP16.69■□□□□ 0.26
TTC21A-213ENST00000479954 CEP164Q9UPV0 1460 aa16.66■□□□□ 0.26
TTC21A-213ENST00000479954 KIF21BO75037 1637 aa16.64■□□□□ 0.25
TTC21A-213ENST00000479954 HNRNPUL2Q1KMD3 747 aaKnown RBP16.63■□□□□ 0.25
TTC21A-213ENST00000479954 MIER1Q8N108 512 aa16.62■□□□□ 0.25
TTC21A-213ENST00000479954 CLIP1P30622 1438 aa16.6■□□□□ 0.25
TTC21A-213ENST00000479954 VPS8Q8N3P4 1428 aa16.57■□□□□ 0.24
TTC21A-213ENST00000479954 SYNJ1O43426 1573 aa16.56■□□□□ 0.24
TTC21A-213ENST00000479954 DNAJC5Q9H3Z4 198 aa16.56■□□□□ 0.24
TTC21A-213ENST00000479954 APLP2Q06481 763 aa16.54■□□□□ 0.24
TTC21A-213ENST00000479954 BAZ1BQ9UIG0 1483 aaKnown RBP16.53■□□□□ 0.24
TTC21A-213ENST00000479954 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
TTC21A-213ENST00000479954 RAPGEF2Q9Y4G8 1499 aa16.45■□□□□ 0.22
TTC21A-213ENST00000479954 CLSPNQ9HAW4 1339 aa16.41■□□□□ 0.22
TTC21A-213ENST00000479954 CUX2O14529 1486 aa16.38■□□□□ 0.21
TTC21A-213ENST00000479954 RANGAP1P46060 587 aaPredicted RBP16.38■□□□□ 0.21
TTC21A-213ENST00000479954 NCAPD3P42695 1498 aa16.38■□□□□ 0.21
TTC21A-213ENST00000479954 ERCC6Q03468 1493 aa16.37■□□□□ 0.21
TTC21A-213ENST00000479954 DHX57Q6P158 1386 aaKnown RBP16.35■□□□□ 0.21
TTC21A-213ENST00000479954 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
TTC21A-213ENST00000479954 ATAD2BQ9ULI0 1458 aa16.33■□□□□ 0.21
TTC21A-213ENST00000479954 ERICH3Q5RHP9 1530 aa16.3■□□□□ 0.2
TTC21A-213ENST00000479954 BIVM-ERCC5R4GMW8 1640 aa16.28■□□□□ 0.2
TTC21A-213ENST00000479954 ARAP1Q96P48 1450 aa16.28■□□□□ 0.2
TTC21A-213ENST00000479954 SUPT16HQ9Y5B9 1047 aaKnown RBP16.25■□□□□ 0.19
TTC21A-213ENST00000479954 PRXQ9BXM0 1461 aa16.24■□□□□ 0.19
TTC21A-213ENST00000479954 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
TTC21A-213ENST00000479954 RRBP1Q9P2E9 1410 aaKnown RBP16.23■□□□□ 0.19
TTC21A-213ENST00000479954 KANK4Q5T7N3 995 aaPredicted RBP16.21■□□□□ 0.19
TTC21A-213ENST00000479954 CCNB3Q8WWL7 1395 aa16.15■□□□□ 0.18
TTC21A-213ENST00000479954 NESP48681 1621 aa16.14■□□□□ 0.17
TTC21A-213ENST00000479954 KIF27Q86VH2 1401 aa16.11■□□□□ 0.17
TTC21A-213ENST00000479954 CUX1P39880 1505 aa16.09■□□□□ 0.17
TTC21A-213ENST00000479954 ARHGAP35Q9NRY4 1499 aa16.08■□□□□ 0.16
TTC21A-213ENST00000479954 ITGAEP38570 1179 aa16.07■□□□□ 0.16
TTC21A-213ENST00000479954 TSHZ2Q9NRE2 1034 aa16.07■□□□□ 0.16
TTC21A-213ENST00000479954 LAMC3Q9Y6N6 1575 aa16.05■□□□□ 0.16
TTC21A-213ENST00000479954 RAB3GAP2Q9H2M9 1393 aa16.04■□□□□ 0.16
TTC21A-213ENST00000479954 MAPKBP1O60336 1514 aa16.03■□□□□ 0.16
TTC21A-213ENST00000479954 THOC2Q8NI27 1593 aaKnown RBP16.02■□□□□ 0.16
TTC21A-213ENST00000479954 TIAM1Q13009 1591 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms