RNA–Protein interactions for RNA: ENST00000479708.1

MAP4K3-210, Transcript of mitogen-activated protein kinase kinase kinase kinase 3, humanhuman

TSL 3

Gene MAP4K3, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP4K3-210ENST00000479708 AEBP2Q6ZN18 517 aaPredicted RBP27.14■■□□□ 1.94
MAP4K3-210ENST00000479708 CHIC1Q5VXU3 224 aa26.23■■□□□ 1.79
MAP4K3-210ENST00000479708 SENP3Q9H4L4 574 aaPredicted RBP23.15■■□□□ 1.3
MAP4K3-210ENST00000479708 PHF23Q9BUL5 403 aaPredicted RBP23■■□□□ 1.27
MAP4K3-210ENST00000479708 NISCHQ9Y2I1 1504 aa22.17■■□□□ 1.14
MAP4K3-210ENST00000479708 FOXD1Q16676 465 aa21.48■■□□□ 1.03
MAP4K3-210ENST00000479708 PLPPR3Q6T4P5 718 aa21.17■□□□□ 0.98
MAP4K3-210ENST00000479708 PPP6R1Q9UPN7 881 aa20.39■□□□□ 0.85
MAP4K3-210ENST00000479708 ADRA2BP18089 450 aa20.33■□□□□ 0.85
MAP4K3-210ENST00000479708 PIAS4Q8N2W9 510 aaPredicted RBP20.15■□□□□ 0.82
MAP4K3-210ENST00000479708 MSH5O43196 834 aa20.01■□□□□ 0.79
MAP4K3-210ENST00000479708 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
MAP4K3-210ENST00000479708 POTEDQ86YR6 584 aa18.75■□□□□ 0.59
MAP4K3-210ENST00000479708 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
MAP4K3-210ENST00000479708 ABCC9O60706 1549 aa18.7■□□□□ 0.58
MAP4K3-210ENST00000479708 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.56
MAP4K3-210ENST00000479708 PPP4R3CPQ6ZMV5 832 aa18.57■□□□□ 0.56
MAP4K3-210ENST00000479708 MAPK8IP2Q13387 824 aaPredicted RBP18.53■□□□□ 0.56
MAP4K3-210ENST00000479708 DMRT2Q9Y5R5 561 aa18.43■□□□□ 0.54
MAP4K3-210ENST00000479708 DCAF1Q9Y4B6 1507 aa18.38■□□□□ 0.53
MAP4K3-210ENST00000479708 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
MAP4K3-210ENST00000479708 NACADO15069 1562 aa18.27■□□□□ 0.52
MAP4K3-210ENST00000479708 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
MAP4K3-210ENST00000479708 RB1CC1Q8TDY2 1594 aa18.21■□□□□ 0.51
MAP4K3-210ENST00000479708 CNKSR2Q8WXI2 1034 aa18.17■□□□□ 0.5
MAP4K3-210ENST00000479708 NCBP3Q53F19 620 aaKnown RBP18.04■□□□□ 0.48
MAP4K3-210ENST00000479708 UNC13AQ9UPW8 1703 aa17.95■□□□□ 0.46
MAP4K3-210ENST00000479708 HOXD11P31277 338 aaPredicted RBP17.94■□□□□ 0.46
MAP4K3-210ENST00000479708 RNF216Q9NWF9 866 aaPredicted RBP17.91■□□□□ 0.46
MAP4K3-210ENST00000479708 SCRIBQ14160 1630 aa17.9■□□□□ 0.46
MAP4K3-210ENST00000479708 SHROOM4Q9ULL8 1493 aa17.72■□□□□ 0.43
MAP4K3-210ENST00000479708 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
MAP4K3-210ENST00000479708 KCNA4P22459 653 aa17.71■□□□□ 0.43
MAP4K3-210ENST00000479708 BICRAQ9NZM4 1560 aa17.67■□□□□ 0.42
MAP4K3-210ENST00000479708 DCAF8L1A6NGE4 600 aa17.52■□□□□ 0.4
MAP4K3-210ENST00000479708 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
MAP4K3-210ENST00000479708 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
MAP4K3-210ENST00000479708 CECR2Q9BXF3 1484 aa17.21■□□□□ 0.35
MAP4K3-210ENST00000479708 BAZ1AQ9NRL2 1556 aaPredicted RBP17.17■□□□□ 0.34
MAP4K3-210ENST00000479708 SMARCA4P51532 1647 aa17.17■□□□□ 0.34
MAP4K3-210ENST00000479708 EIF4G1Q04637 1599 aaKnown RBP17.15■□□□□ 0.34
MAP4K3-210ENST00000479708 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
MAP4K3-210ENST00000479708 RNF39Q9H2S5 420 aa17.1■□□□□ 0.33
MAP4K3-210ENST00000479708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.02■□□□□ 0.32
MAP4K3-210ENST00000479708 RSF1Q96T23 1441 aaPredicted RBP17.02■□□□□ 0.31
MAP4K3-210ENST00000479708 WIZO95785 1651 aa16.99■□□□□ 0.31
MAP4K3-210ENST00000479708 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
MAP4K3-210ENST00000479708 PEG3Q9GZU2 1588 aa16.98■□□□□ 0.31
MAP4K3-210ENST00000479708 SMARCA2P51531 1590 aa16.93■□□□□ 0.3
MAP4K3-210ENST00000479708 C1QBPQ07021 282 aaKnown RBP16.9■□□□□ 0.3
MAP4K3-210ENST00000479708 ATAD2BQ9ULI0 1458 aa16.9■□□□□ 0.3
MAP4K3-210ENST00000479708 CACNB1Q02641 598 aaPredicted RBP16.84■□□□□ 0.29
MAP4K3-210ENST00000479708 HMGXB3Q12766 1538 aa16.84■□□□□ 0.29
MAP4K3-210ENST00000479708 SUPT5HO00267 1087 aaKnown RBP16.83■□□□□ 0.28
MAP4K3-210ENST00000479708 SLC4A1APQ9BWU0 796 aaKnown RBP16.83■□□□□ 0.28
MAP4K3-210ENST00000479708 NCAPD3P42695 1498 aa16.81■□□□□ 0.28
MAP4K3-210ENST00000479708 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
MAP4K3-210ENST00000479708 TOP2AP11388 1531 aaKnown RBP16.8■□□□□ 0.28
MAP4K3-210ENST00000479708 BAZ1BQ9UIG0 1483 aaKnown RBP16.8■□□□□ 0.28
MAP4K3-210ENST00000479708 U3KPZ7 1027 aaPredicted RBP16.71■□□□□ 0.27
MAP4K3-210ENST00000479708 CCDC88BA6NC98 1476 aa16.55■□□□□ 0.24
MAP4K3-210ENST00000479708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.48■□□□□ 0.23
MAP4K3-210ENST00000479708 HNRNPUL2Q1KMD3 747 aaKnown RBP16.48■□□□□ 0.23
MAP4K3-210ENST00000479708 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
MAP4K3-210ENST00000479708 FOXD4L1Q9NU39 408 aa16.44■□□□□ 0.22
MAP4K3-210ENST00000479708 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
MAP4K3-210ENST00000479708 APLP2Q06481 763 aa16.39■□□□□ 0.21
MAP4K3-210ENST00000479708 SAMD1Q6SPF0 538 aaPredicted RBP16.38■□□□□ 0.21
MAP4K3-210ENST00000479708 LAMC3Q9Y6N6 1575 aa16.37■□□□□ 0.21
MAP4K3-210ENST00000479708 CFTRP13569 1480 aa16.35■□□□□ 0.21
MAP4K3-210ENST00000479708 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
MAP4K3-210ENST00000479708 NESP48681 1621 aa16.33■□□□□ 0.2
MAP4K3-210ENST00000479708 SPINK5Q9NQ38 1064 aaPredicted RBP16.31■□□□□ 0.2
MAP4K3-210ENST00000479708 ZBTB22O15209 634 aa16.28■□□□□ 0.2
MAP4K3-210ENST00000479708 CAPN15O75808 1086 aa16.27■□□□□ 0.2
MAP4K3-210ENST00000479708 KIF21AQ7Z4S6 1674 aa16.25■□□□□ 0.19
MAP4K3-210ENST00000479708 FANCD2Q9BXW9 1451 aa16.18■□□□□ 0.18
MAP4K3-210ENST00000479708 ZNF219Q9P2Y4 722 aaPredicted RBP16.17■□□□□ 0.18
MAP4K3-210ENST00000479708 PDS5BQ9NTI5 1447 aa16.17■□□□□ 0.18
MAP4K3-210ENST00000479708 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
MAP4K3-210ENST00000479708 DSG3P32926 999 aa16.13■□□□□ 0.17
MAP4K3-210ENST00000479708 ABCC8Q09428 1581 aa16.13■□□□□ 0.17
MAP4K3-210ENST00000479708 TRHP20396 242 aaPredicted RBP16.09■□□□□ 0.17
MAP4K3-210ENST00000479708 ERCC6Q03468 1493 aa16.08■□□□□ 0.16
MAP4K3-210ENST00000479708 BIVM-ERCC5R4GMW8 1640 aa16.05■□□□□ 0.16
MAP4K3-210ENST00000479708 THOC2Q8NI27 1593 aaKnown RBP16.05■□□□□ 0.16
MAP4K3-210ENST00000479708 SYNJ1O43426 1573 aa16.04■□□□□ 0.16
MAP4K3-210ENST00000479708 WRNQ14191 1432 aaPredicted RBP eCLIP16.03■□□□□ 0.16
MAP4K3-210ENST00000479708 DNMBPQ6XZF7 1577 aa16.03■□□□□ 0.16
MAP4K3-210ENST00000479708 CUX1P39880 1505 aa16.03■□□□□ 0.16
MAP4K3-210ENST00000479708 MRC2Q9UBG0 1479 aa16.03■□□□□ 0.16
MAP4K3-210ENST00000479708 TOP2BQ02880 1626 aa16.02■□□□□ 0.16
MAP4K3-210ENST00000479708 URB2Q14146 1524 aaKnown RBP16.02■□□□□ 0.15
MAP4K3-210ENST00000479708 ATXN8OSP0DMR3 200 aa16■□□□□ 0.15
MAP4K3-210ENST00000479708 WDR62O43379 1518 aa15.99■□□□□ 0.15
MAP4K3-210ENST00000479708 TOPBP1Q92547 1522 aa15.99■□□□□ 0.15
MAP4K3-210ENST00000479708 CSRNP3Q8WYN3 585 aa15.94■□□□□ 0.14
MAP4K3-210ENST00000479708 ATF5Q9Y2D1 282 aaPredicted RBP15.92■□□□□ 0.14
MAP4K3-210ENST00000479708 FGD5Q6ZNL6 1462 aa15.9■□□□□ 0.14
MAP4K3-210ENST00000479708 ABCB7O75027 752 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms