RNA–Protein interactions for RNA: ENST00000479481.5

RRP12-207, Transcript of ribosomal RNA processing 12 homolog, humanhuman

TSL 1 (best)

Gene RRP12, Length 3,271 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP12-207ENST00000479481 NISCHQ9Y2I1 1504 aa21.82■■□□□ 1.08
RRP12-207ENST00000479481 DCAF8L2P0C7V8 631 aa18.87■□□□□ 0.61
RRP12-207ENST00000479481 SHROOM4Q9ULL8 1493 aa18.76■□□□□ 0.59
RRP12-207ENST00000479481 CCDC180Q9P1Z9 1646 aa18.66■□□□□ 0.58
RRP12-207ENST00000479481 ZCCHC6Q5VYS8 1495 aaKnown RBP18.43■□□□□ 0.54
RRP12-207ENST00000479481 SUPT5HO00267 1087 aaKnown RBP18.26■□□□□ 0.51
RRP12-207ENST00000479481 DCAF1Q9Y4B6 1507 aa17.97■□□□□ 0.47
RRP12-207ENST00000479481 ABCC9O60706 1549 aa17.94■□□□□ 0.46
RRP12-207ENST00000479481 SCRIBQ14160 1630 aa17.56■□□□□ 0.4
RRP12-207ENST00000479481 CHIC1Q5VXU3 224 aa17.55■□□□□ 0.4
RRP12-207ENST00000479481 MYO15BQ96JP2 1530 aa17.5■□□□□ 0.39
RRP12-207ENST00000479481 NACADO15069 1562 aa17.27■□□□□ 0.36
RRP12-207ENST00000479481 PABPN1Q86U42 306 aaKnown RBP eCLIP17.25■□□□□ 0.35
RRP12-207ENST00000479481 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.35
RRP12-207ENST00000479481 PCGF6Q9BYE7 350 aa17.21■□□□□ 0.35
RRP12-207ENST00000479481 HRCP23327 699 aa17.18■□□□□ 0.34
RRP12-207ENST00000479481 CECR2Q9BXF3 1484 aa17.14■□□□□ 0.33
RRP12-207ENST00000479481 RB1CC1Q8TDY2 1594 aa17.13■□□□□ 0.33
RRP12-207ENST00000479481 PPARGC1BQ86YN6 1023 aaKnown RBP17.08■□□□□ 0.33
RRP12-207ENST00000479481 EHMT2Q96KQ7 1210 aa17.04■□□□□ 0.32
RRP12-207ENST00000479481 FAM9AQ8IZU1 332 aaPredicted RBP16.98■□□□□ 0.31
RRP12-207ENST00000479481 LOC105371045A0A1W2PR82 267 aa16.97■□□□□ 0.31
RRP12-207ENST00000479481 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
RRP12-207ENST00000479481 TRIM41Q8WV44 630 aa16.91■□□□□ 0.3
RRP12-207ENST00000479481 WIZO95785 1651 aa16.82■□□□□ 0.28
RRP12-207ENST00000479481 BAZ1AQ9NRL2 1556 aaPredicted RBP16.8■□□□□ 0.28
RRP12-207ENST00000479481 UNC13AQ9UPW8 1703 aa16.73■□□□□ 0.27
RRP12-207ENST00000479481 TRIM26Q12899 539 aaPredicted RBP16.67■□□□□ 0.26
RRP12-207ENST00000479481 SMARCA4P51532 1647 aa16.64■□□□□ 0.25
RRP12-207ENST00000479481 BICRAQ9NZM4 1560 aa16.62■□□□□ 0.25
RRP12-207ENST00000479481 TOP2AP11388 1531 aaKnown RBP16.61■□□□□ 0.25
RRP12-207ENST00000479481 EIF4G1Q04637 1599 aaKnown RBP16.55■□□□□ 0.24
RRP12-207ENST00000479481 CCDC88BA6NC98 1476 aa16.51■□□□□ 0.23
RRP12-207ENST00000479481 SMARCA2P51531 1590 aa16.49■□□□□ 0.23
RRP12-207ENST00000479481 ABCC8Q09428 1581 aa16.41■□□□□ 0.22
RRP12-207ENST00000479481 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
RRP12-207ENST00000479481 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
RRP12-207ENST00000479481 PEG3Q9GZU2 1588 aa16.35■□□□□ 0.21
RRP12-207ENST00000479481 ZEB1P37275 1124 aaPredicted RBP16.34■□□□□ 0.21
RRP12-207ENST00000479481 TTBK1Q5TCY1 1321 aaPredicted RBP16.33■□□□□ 0.2
RRP12-207ENST00000479481 RANGAP1P46060 587 aaPredicted RBP16.3■□□□□ 0.2
RRP12-207ENST00000479481 EEA1Q15075 1411 aa16.27■□□□□ 0.19
RRP12-207ENST00000479481 UBTFP17480 764 aaKnown RBP16.25■□□□□ 0.19
RRP12-207ENST00000479481 SOGA1O94964 1423 aa16.23■□□□□ 0.19
RRP12-207ENST00000479481 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
RRP12-207ENST00000479481 WRNQ14191 1432 aaPredicted RBP eCLIP16.2■□□□□ 0.18
RRP12-207ENST00000479481 TNIKQ9UKE5 1360 aa16.17■□□□□ 0.18
RRP12-207ENST00000479481 SCAF1Q9H7N4 1312 aaKnown RBP16.17■□□□□ 0.18
RRP12-207ENST00000479481 RUSC2Q8N2Y8 1516 aa16.16■□□□□ 0.18
RRP12-207ENST00000479481 CEP162Q5TB80 1403 aa16.15■□□□□ 0.18
RRP12-207ENST00000479481 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
RRP12-207ENST00000479481 SYNJ1O43426 1573 aa16.07■□□□□ 0.16
RRP12-207ENST00000479481 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
RRP12-207ENST00000479481 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
RRP12-207ENST00000479481 CEP164Q9UPV0 1460 aa16.03■□□□□ 0.16
RRP12-207ENST00000479481 PELP1Q8IZL8 1130 aaKnown RBP16.02■□□□□ 0.16
RRP12-207ENST00000479481 DNAJC5BQ9UF47 199 aa16■□□□□ 0.15
RRP12-207ENST00000479481 KIF21BO75037 1637 aa15.99■□□□□ 0.15
RRP12-207ENST00000479481 CCER1Q8TC90 406 aaPredicted RBP15.99■□□□□ 0.15
RRP12-207ENST00000479481 HMGXB3Q12766 1538 aa15.96■□□□□ 0.15
RRP12-207ENST00000479481 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
RRP12-207ENST00000479481 CC2D2AQ9P2K1 1620 aa15.93■□□□□ 0.14
RRP12-207ENST00000479481 CLIP1P30622 1438 aa15.89■□□□□ 0.13
RRP12-207ENST00000479481 BIVM-ERCC5R4GMW8 1640 aa15.88■□□□□ 0.13
RRP12-207ENST00000479481 NEUROD1Q13562 356 aa15.88■□□□□ 0.13
RRP12-207ENST00000479481 RAPGEF2Q9Y4G8 1499 aa15.85■□□□□ 0.13
RRP12-207ENST00000479481 CADPSQ9ULU8 1353 aa15.83■□□□□ 0.13
RRP12-207ENST00000479481 ACIN1Q9UKV3 1341 aaKnown RBP15.83■□□□□ 0.12
RRP12-207ENST00000479481 VPS8Q8N3P4 1428 aa15.82■□□□□ 0.12
RRP12-207ENST00000479481 APLP2Q06481 763 aa15.81■□□□□ 0.12
RRP12-207ENST00000479481 CFTRP13569 1480 aa15.81■□□□□ 0.12
RRP12-207ENST00000479481 GTF3C3Q9Y5Q9 886 aa15.8■□□□□ 0.12
RRP12-207ENST00000479481 NESP48681 1621 aa15.8■□□□□ 0.12
RRP12-207ENST00000479481 DIEXFQ68CQ4 756 aaKnown RBP15.79■□□□□ 0.12
RRP12-207ENST00000479481 CUX1P39880 1505 aa15.77■□□□□ 0.12
RRP12-207ENST00000479481 ERICH3Q5RHP9 1530 aa15.77■□□□□ 0.12
RRP12-207ENST00000479481 PRXQ9BXM0 1461 aa15.74■□□□□ 0.11
RRP12-207ENST00000479481 YTHDC1Q96MU7 727 aaKnown RBP15.74■□□□□ 0.11
RRP12-207ENST00000479481 KIF27Q86VH2 1401 aa15.74■□□□□ 0.11
RRP12-207ENST00000479481 CENPBP07199 599 aaPredicted RBP15.72■□□□□ 0.11
RRP12-207ENST00000479481 P3H3Q8IVL6 736 aa15.7■□□□□ 0.1
RRP12-207ENST00000479481 ATP1B4Q9UN42 357 aaPredicted RBP15.7■□□□□ 0.1
RRP12-207ENST00000479481 HNRNPUL2Q1KMD3 747 aaKnown RBP15.69■□□□□ 0.1
RRP12-207ENST00000479481 CUX2O14529 1486 aa15.69■□□□□ 0.1
RRP12-207ENST00000479481 PRDM2Q13029 1718 aa15.69■□□□□ 0.1
RRP12-207ENST00000479481 FANCD2Q9BXW9 1451 aa15.68■□□□□ 0.1
RRP12-207ENST00000479481 FGD5Q6ZNL6 1462 aa15.62■□□□□ 0.09
RRP12-207ENST00000479481 RAD54L2Q9Y4B4 1467 aa15.62■□□□□ 0.09
RRP12-207ENST00000479481 ARAP1Q96P48 1450 aa15.61■□□□□ 0.09
RRP12-207ENST00000479481 IGF1RP08069 1367 aa15.57■□□□□ 0.08
RRP12-207ENST00000479481 TDRD9Q8NDG6 1382 aaKnown RBP15.56■□□□□ 0.08
RRP12-207ENST00000479481 ITGAEP38570 1179 aa15.55■□□□□ 0.08
RRP12-207ENST00000479481 CARMIL1Q5VZK9 1371 aa15.55■□□□□ 0.08
RRP12-207ENST00000479481 ZNF316A6NFI3 1004 aaPredicted RBP15.52■□□□□ 0.08
RRP12-207ENST00000479481 KANK4Q5T7N3 995 aaPredicted RBP15.51■□□□□ 0.07
RRP12-207ENST00000479481 ARHGAP35Q9NRY4 1499 aa15.5■□□□□ 0.07
RRP12-207ENST00000479481 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
RRP12-207ENST00000479481 POLA1P09884 1462 aaPredicted RBP15.47■□□□□ 0.07
RRP12-207ENST00000479481 PDS5BQ9NTI5 1447 aa15.46■□□□□ 0.07
RRP12-207ENST00000479481 MIER1Q8N108 512 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms