RNA–Protein interactions for RNA: ENST00000478471.1

ZIC3-203, Transcript of Zic family member 3, humanhuman

TSL 2

Gene ZIC3, Length 366 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-203ENST00000478471 AEBP2Q6ZN18 517 aaPredicted RBP16.55■□□□□ 0.24
ZIC3-203ENST00000478471 CHIC1Q5VXU3 224 aa15.72■□□□□ 0.11
ZIC3-203ENST00000478471 SENP3Q9H4L4 574 aaPredicted RBP14.53□□□□□ -0.08
ZIC3-203ENST00000478471 POTEDQ86YR6 584 aa14.3□□□□□ -0.12
ZIC3-203ENST00000478471 DNAJC5BQ9UF47 199 aa14.29□□□□□ -0.12
ZIC3-203ENST00000478471 DNAJC5Q9H3Z4 198 aa14.14□□□□□ -0.15
ZIC3-203ENST00000478471 PHF23Q9BUL5 403 aaPredicted RBP14.09□□□□□ -0.15
ZIC3-203ENST00000478471 ABCC9O60706 1549 aa13.97□□□□□ -0.17
ZIC3-203ENST00000478471 NISCHQ9Y2I1 1504 aa13.55□□□□□ -0.24
ZIC3-203ENST00000478471 FOXD1Q16676 465 aa13.48□□□□□ -0.25
ZIC3-203ENST00000478471 MSH5O43196 834 aa13.2□□□□□ -0.3
ZIC3-203ENST00000478471 TRIM41Q8WV44 630 aa12.89□□□□□ -0.35
ZIC3-203ENST00000478471 PABPN1Q86U42 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
ZIC3-203ENST00000478471 RB1CC1Q8TDY2 1594 aa12.77□□□□□ -0.36
ZIC3-203ENST00000478471 CECR2Q9BXF3 1484 aa12.76□□□□□ -0.37
ZIC3-203ENST00000478471 CCDC180Q9P1Z9 1646 aa12.75□□□□□ -0.37
ZIC3-203ENST00000478471 CUX2O14529 1486 aa12.66□□□□□ -0.38
ZIC3-203ENST00000478471 CC2D2AQ9P2K1 1620 aa12.58□□□□□ -0.4
ZIC3-203ENST00000478471 BICRAQ9NZM4 1560 aa12.43□□□□□ -0.42
ZIC3-203ENST00000478471 UNC13AQ9UPW8 1703 aa12.42□□□□□ -0.42
ZIC3-203ENST00000478471 PLPPR3Q6T4P5 718 aa12.4□□□□□ -0.42
ZIC3-203ENST00000478471 PIAS4Q8N2W9 510 aaPredicted RBP12.4□□□□□ -0.42
ZIC3-203ENST00000478471 NACADO15069 1562 aa12.39□□□□□ -0.43
ZIC3-203ENST00000478471 ILDR1Q86SU0 546 aaPredicted RBP12.32□□□□□ -0.44
ZIC3-203ENST00000478471 EIF4G1Q04637 1599 aaKnown RBP12.24□□□□□ -0.45
ZIC3-203ENST00000478471 SHROOM4Q9ULL8 1493 aa12.22□□□□□ -0.45
ZIC3-203ENST00000478471 ERCC6Q03468 1493 aa12.18□□□□□ -0.46
ZIC3-203ENST00000478471 DCAF8L2P0C7V8 631 aa11.93□□□□□ -0.5
ZIC3-203ENST00000478471 TRHP20396 242 aaPredicted RBP11.89□□□□□ -0.51
ZIC3-203ENST00000478471 OSCARQ8IYS5 282 aa11.84□□□□□ -0.51
ZIC3-203ENST00000478471 MYO15BQ96JP2 1530 aa11.82□□□□□ -0.52
ZIC3-203ENST00000478471 THOC2Q8NI27 1593 aaKnown RBP11.8□□□□□ -0.52
ZIC3-203ENST00000478471 CACNB1Q02641 598 aaPredicted RBP11.8□□□□□ -0.52
ZIC3-203ENST00000478471 PPP6R1Q9UPN7 881 aa11.8□□□□□ -0.52
ZIC3-203ENST00000478471 RIMBP3CA6NJZ7 1639 aa11.79□□□□□ -0.52
ZIC3-203ENST00000478471 RIMBP3BA6NNM3 1639 aa11.79□□□□□ -0.52
ZIC3-203ENST00000478471 RIMBP3Q9UFD9 1639 aa11.79□□□□□ -0.52
ZIC3-203ENST00000478471 ADRA2BP18089 450 aa11.75□□□□□ -0.53
ZIC3-203ENST00000478471 BAZ1AQ9NRL2 1556 aaPredicted RBP11.75□□□□□ -0.53
ZIC3-203ENST00000478471 ARHGEF11O15085 1522 aa11.64□□□□□ -0.55
ZIC3-203ENST00000478471 NESP48681 1621 aa11.62□□□□□ -0.55
ZIC3-203ENST00000478471 SOCS7O14512 581 aa11.61□□□□□ -0.55
ZIC3-203ENST00000478471 CYB5RLQ6IPT4 315 aa11.61□□□□□ -0.55
ZIC3-203ENST00000478471 LMTK3Q96Q04 1460 aa11.59□□□□□ -0.55
ZIC3-203ENST00000478471 SCRIBQ14160 1630 aa11.57□□□□□ -0.56
ZIC3-203ENST00000478471 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
ZIC3-203ENST00000478471 FBXO41Q8TF61 875 aa11.5□□□□□ -0.57
ZIC3-203ENST00000478471 NCAPD3P42695 1498 aa11.45□□□□□ -0.58
ZIC3-203ENST00000478471 ARAP1Q96P48 1450 aa11.43□□□□□ -0.58
ZIC3-203ENST00000478471 KIF21AQ7Z4S6 1674 aa11.43□□□□□ -0.58
ZIC3-203ENST00000478471 ERCC6L2Q5T890 1561 aa11.39□□□□□ -0.59
ZIC3-203ENST00000478471 ILDR2Q71H61 639 aa11.39□□□□□ -0.59
ZIC3-203ENST00000478471 LAMC3Q9Y6N6 1575 aa11.39□□□□□ -0.59
ZIC3-203ENST00000478471 PDS5BQ9NTI5 1447 aa11.37□□□□□ -0.59
ZIC3-203ENST00000478471 WDR62O43379 1518 aa11.36□□□□□ -0.59
ZIC3-203ENST00000478471 MRC2Q9UBG0 1479 aa11.34□□□□□ -0.59
ZIC3-203ENST00000478471 KDM4FA0A1W2PPD8 638 aa11.34□□□□□ -0.59
ZIC3-203ENST00000478471 DMRT2Q9Y5R5 561 aa11.31□□□□□ -0.6
ZIC3-203ENST00000478471 HMGXB3Q12766 1538 aa11.24□□□□□ -0.61
ZIC3-203ENST00000478471 DISP3Q9P2K9 1392 aa11.22□□□□□ -0.61
ZIC3-203ENST00000478471 RSF1Q96T23 1441 aaPredicted RBP11.21□□□□□ -0.61
ZIC3-203ENST00000478471 ATAD2BQ9ULI0 1458 aa11.2□□□□□ -0.62
ZIC3-203ENST00000478471 HECW2Q9P2P5 1572 aa11.2□□□□□ -0.62
ZIC3-203ENST00000478471 DCAF1Q9Y4B6 1507 aa11.17□□□□□ -0.62
ZIC3-203ENST00000478471 RNF39Q9H2S5 420 aa11.07□□□□□ -0.64
ZIC3-203ENST00000478471 SYNJ2O15056 1496 aa11.06□□□□□ -0.64
ZIC3-203ENST00000478471 POTEHQ6S545 545 aa11.06□□□□□ -0.64
ZIC3-203ENST00000478471 SCAF1Q9H7N4 1312 aaKnown RBP11.05□□□□□ -0.64
ZIC3-203ENST00000478471 CADPSQ9ULU8 1353 aa11.03□□□□□ -0.64
ZIC3-203ENST00000478471 CEP164Q9UPV0 1460 aa11.02□□□□□ -0.65
ZIC3-203ENST00000478471 BAZ1BQ9UIG0 1483 aaKnown RBP11.01□□□□□ -0.65
ZIC3-203ENST00000478471 MAPK8IP2Q13387 824 aaPredicted RBP11□□□□□ -0.65
ZIC3-203ENST00000478471 C1QBPQ07021 282 aaKnown RBP10.97□□□□□ -0.65
ZIC3-203ENST00000478471 CHD1O14646 1710 aa10.96□□□□□ -0.65
ZIC3-203ENST00000478471 SPATA31D1Q6ZQQ2 1576 aa10.96□□□□□ -0.65
ZIC3-203ENST00000478471 ZCCHC6Q5VYS8 1495 aaKnown RBP10.95□□□□□ -0.66
ZIC3-203ENST00000478471 SMARCA4P51532 1647 aa10.94□□□□□ -0.66
ZIC3-203ENST00000478471 ZNF608Q9ULD9 1512 aaPredicted RBP10.94□□□□□ -0.66
ZIC3-203ENST00000478471 PPP4R3CPQ6ZMV5 832 aa10.93□□□□□ -0.66
ZIC3-203ENST00000478471 ADGRL1O94910 1474 aa10.93□□□□□ -0.66
ZIC3-203ENST00000478471 KIF13AQ9H1H9 1805 aa10.91□□□□□ -0.66
ZIC3-203ENST00000478471 FANCD2Q9BXW9 1451 aa10.88□□□□□ -0.67
ZIC3-203ENST00000478471 URB2Q14146 1524 aaKnown RBP10.87□□□□□ -0.67
ZIC3-203ENST00000478471 IFT140Q96RY7 1462 aa10.87□□□□□ -0.67
ZIC3-203ENST00000478471 KDM6BO15054 1643 aa10.86□□□□□ -0.67
ZIC3-203ENST00000478471 CLASP1Q7Z460 1538 aa10.85□□□□□ -0.67
ZIC3-203ENST00000478471 GAPVD1Q14C86 1478 aa10.85□□□□□ -0.67
ZIC3-203ENST00000478471 FBLN2P98095 1184 aa10.84□□□□□ -0.67
ZIC3-203ENST00000478471 EIF4G3O43432 1585 aaKnown RBP10.82□□□□□ -0.68
ZIC3-203ENST00000478471 DCAF8L1A6NGE4 600 aa10.81□□□□□ -0.68
ZIC3-203ENST00000478471 PEG3Q9GZU2 1588 aa10.8□□□□□ -0.68
ZIC3-203ENST00000478471 KCNA4P22459 653 aa10.79□□□□□ -0.68
ZIC3-203ENST00000478471 SYNJ1O43426 1573 aa10.73□□□□□ -0.69
ZIC3-203ENST00000478471 FAM69CQ0P6D2 419 aa10.72□□□□□ -0.69
ZIC3-203ENST00000478471 CERKQ8TCT0 537 aa10.72□□□□□ -0.69
ZIC3-203ENST00000478471 ABCC10Q5T3U5 1492 aa10.71□□□□□ -0.69
ZIC3-203ENST00000478471 AQRO60306 1485 aaKnown RBP eCLIP10.68□□□□□ -0.7
ZIC3-203ENST00000478471 NCBP3Q53F19 620 aaKnown RBP10.65□□□□□ -0.7
ZIC3-203ENST00000478471 CFTRP13569 1480 aa10.63□□□□□ -0.71
ZIC3-203ENST00000478471 CNKSR2Q8WXI2 1034 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms