RNA–Protein interactions for RNA: ENST00000477945.1

SRRD-203, Transcript of SRR1 domain containing, humanhuman

TSL 5

Gene SRRD, Length 607 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-203ENST00000477945 AEBP2Q6ZN18 517 aaPredicted RBP14.38□□□□□ -0.11
SRRD-203ENST00000477945 CHIC1Q5VXU3 224 aa14.13□□□□□ -0.15
SRRD-203ENST00000477945 NISCHQ9Y2I1 1504 aa13.75□□□□□ -0.21
SRRD-203ENST00000477945 PHF23Q9BUL5 403 aaPredicted RBP12.55□□□□□ -0.4
SRRD-203ENST00000477945 SENP3Q9H4L4 574 aaPredicted RBP12.02□□□□□ -0.49
SRRD-203ENST00000477945 CCDC180Q9P1Z9 1646 aa11.97□□□□□ -0.49
SRRD-203ENST00000477945 ZCCHC6Q5VYS8 1495 aaKnown RBP11.61□□□□□ -0.55
SRRD-203ENST00000477945 PLPPR3Q6T4P5 718 aa11.51□□□□□ -0.57
SRRD-203ENST00000477945 DCAF1Q9Y4B6 1507 aa11.45□□□□□ -0.58
SRRD-203ENST00000477945 MYO15BQ96JP2 1530 aa11.25□□□□□ -0.61
SRRD-203ENST00000477945 FOXD1Q16676 465 aa11.24□□□□□ -0.61
SRRD-203ENST00000477945 SHROOM4Q9ULL8 1493 aa11.22□□□□□ -0.61
SRRD-203ENST00000477945 DCAF8L2P0C7V8 631 aa11.12□□□□□ -0.63
SRRD-203ENST00000477945 NACADO15069 1562 aa11.07□□□□□ -0.64
SRRD-203ENST00000477945 PPP6R1Q9UPN7 881 aa11.04□□□□□ -0.64
SRRD-203ENST00000477945 ADRA2BP18089 450 aa11.01□□□□□ -0.65
SRRD-203ENST00000477945 ABCC9O60706 1549 aa10.99□□□□□ -0.65
SRRD-203ENST00000477945 SCRIBQ14160 1630 aa10.92□□□□□ -0.66
SRRD-203ENST00000477945 RB1CC1Q8TDY2 1594 aa10.91□□□□□ -0.66
SRRD-203ENST00000477945 SUPT5HO00267 1087 aaKnown RBP10.9□□□□□ -0.66
SRRD-203ENST00000477945 RSF1Q96T23 1441 aaPredicted RBP10.73□□□□□ -0.69
SRRD-203ENST00000477945 UNC13AQ9UPW8 1703 aa10.71□□□□□ -0.69
SRRD-203ENST00000477945 BAZ1AQ9NRL2 1556 aaPredicted RBP10.62□□□□□ -0.71
SRRD-203ENST00000477945 CECR2Q9BXF3 1484 aa10.61□□□□□ -0.71
SRRD-203ENST00000477945 PIAS4Q8N2W9 510 aaPredicted RBP10.61□□□□□ -0.71
SRRD-203ENST00000477945 MROH2BQ7Z745 1585 aa10.6□□□□□ -0.71
SRRD-203ENST00000477945 BICRAQ9NZM4 1560 aa10.56□□□□□ -0.72
SRRD-203ENST00000477945 SMARCA4P51532 1647 aa10.54□□□□□ -0.72
SRRD-203ENST00000477945 WIZO95785 1651 aa10.53□□□□□ -0.72
SRRD-203ENST00000477945 TOP2AP11388 1531 aaKnown RBP10.47□□□□□ -0.73
SRRD-203ENST00000477945 PEG3Q9GZU2 1588 aa10.44□□□□□ -0.74
SRRD-203ENST00000477945 EIF4G1Q04637 1599 aaKnown RBP10.39□□□□□ -0.75
SRRD-203ENST00000477945 SMARCA2P51531 1590 aa10.36□□□□□ -0.75
SRRD-203ENST00000477945 PABPN1Q86U42 306 aaKnown RBP eCLIP10.36□□□□□ -0.75
SRRD-203ENST00000477945 CCDC88BA6NC98 1476 aa10.32□□□□□ -0.76
SRRD-203ENST00000477945 ATAD2BQ9ULI0 1458 aa10.3□□□□□ -0.76
SRRD-203ENST00000477945 TRIM41Q8WV44 630 aa10.28□□□□□ -0.76
SRRD-203ENST00000477945 KCNA4P22459 653 aa10.26□□□□□ -0.77
SRRD-203ENST00000477945 BAZ1BQ9UIG0 1483 aaKnown RBP10.23□□□□□ -0.77
SRRD-203ENST00000477945 PPP4R3CPQ6ZMV5 832 aa10.23□□□□□ -0.77
SRRD-203ENST00000477945 HMGXB3Q12766 1538 aa10.23□□□□□ -0.77
SRRD-203ENST00000477945 NCAPD3P42695 1498 aa10.19□□□□□ -0.78
SRRD-203ENST00000477945 MSH5O43196 834 aa10.16□□□□□ -0.78
SRRD-203ENST00000477945 LOC105371045A0A1W2PR82 267 aa10.15□□□□□ -0.78
SRRD-203ENST00000477945 ABCC8Q09428 1581 aa10.14□□□□□ -0.79
SRRD-203ENST00000477945 EEA1Q15075 1411 aa10.1□□□□□ -0.79
SRRD-203ENST00000477945 WRNQ14191 1432 aaPredicted RBP eCLIP10.08□□□□□ -0.8
SRRD-203ENST00000477945 PRDM2Q13029 1718 aa10.05□□□□□ -0.8
SRRD-203ENST00000477945 SYNJ1O43426 1573 aa10.05□□□□□ -0.8
SRRD-203ENST00000477945 FAM9AQ8IZU1 332 aaPredicted RBP10.03□□□□□ -0.8
SRRD-203ENST00000477945 BIVM-ERCC5R4GMW8 1640 aa10.03□□□□□ -0.8
SRRD-203ENST00000477945 TOP2BQ02880 1626 aa10.02□□□□□ -0.81
SRRD-203ENST00000477945 CFTRP13569 1480 aa10.02□□□□□ -0.81
SRRD-203ENST00000477945 CC2D2AQ9P2K1 1620 aa10□□□□□ -0.81
SRRD-203ENST00000477945 SOGA1O94964 1423 aa9.99□□□□□ -0.81
SRRD-203ENST00000477945 MAPK8IP2Q13387 824 aaPredicted RBP9.98□□□□□ -0.81
SRRD-203ENST00000477945 KIF21BO75037 1637 aa9.96□□□□□ -0.81
SRRD-203ENST00000477945 CSRNP3Q8WYN3 585 aa9.95□□□□□ -0.82
SRRD-203ENST00000477945 TNIKQ9UKE5 1360 aa9.94□□□□□ -0.82
SRRD-203ENST00000477945 RUSC2Q8N2Y8 1516 aa9.93□□□□□ -0.82
SRRD-203ENST00000477945 GOLGA3Q08378 1498 aa9.93□□□□□ -0.82
SRRD-203ENST00000477945 CEP164Q9UPV0 1460 aa9.92□□□□□ -0.82
SRRD-203ENST00000477945 TRIM26Q12899 539 aaPredicted RBP9.92□□□□□ -0.82
SRRD-203ENST00000477945 CUX1P39880 1505 aa9.92□□□□□ -0.82
SRRD-203ENST00000477945 CADPSQ9ULU8 1353 aa9.91□□□□□ -0.82
SRRD-203ENST00000477945 NCBP3Q53F19 620 aaKnown RBP9.91□□□□□ -0.82
SRRD-203ENST00000477945 PCGF6Q9BYE7 350 aa9.9□□□□□ -0.82
SRRD-203ENST00000477945 SCAF1Q9H7N4 1312 aaKnown RBP9.89□□□□□ -0.83
SRRD-203ENST00000477945 NPM3O75607 178 aaKnown RBP9.89□□□□□ -0.83
SRRD-203ENST00000477945 CEP162Q5TB80 1403 aa9.88□□□□□ -0.83
SRRD-203ENST00000477945 ERICH3Q5RHP9 1530 aa9.86□□□□□ -0.83
SRRD-203ENST00000477945 HRCP23327 699 aa9.84□□□□□ -0.83
SRRD-203ENST00000477945 CNKSR2Q8WXI2 1034 aa9.84□□□□□ -0.83
SRRD-203ENST00000477945 LAMC3Q9Y6N6 1575 aa9.83□□□□□ -0.84
SRRD-203ENST00000477945 KIF27Q86VH2 1401 aa9.82□□□□□ -0.84
SRRD-203ENST00000477945 PRXQ9BXM0 1461 aa9.82□□□□□ -0.84
SRRD-203ENST00000477945 EHMT2Q96KQ7 1210 aa9.81□□□□□ -0.84
SRRD-203ENST00000477945 FANCD2Q9BXW9 1451 aa9.8□□□□□ -0.84
SRRD-203ENST00000477945 DNMBPQ6XZF7 1577 aa9.8□□□□□ -0.84
SRRD-203ENST00000477945 RAPGEF2Q9Y4G8 1499 aa9.79□□□□□ -0.84
SRRD-203ENST00000477945 UBTFP17480 764 aaKnown RBP9.79□□□□□ -0.84
SRRD-203ENST00000477945 FGD5Q6ZNL6 1462 aa9.76□□□□□ -0.85
SRRD-203ENST00000477945 CLIP1P30622 1438 aa9.75□□□□□ -0.85
SRRD-203ENST00000477945 SLC4A1APQ9BWU0 796 aaKnown RBP9.74□□□□□ -0.85
SRRD-203ENST00000477945 TOPBP1Q92547 1522 aa9.73□□□□□ -0.85
SRRD-203ENST00000477945 VPS8Q8N3P4 1428 aa9.73□□□□□ -0.85
SRRD-203ENST00000477945 CUX2O14529 1486 aa9.72□□□□□ -0.85
SRRD-203ENST00000477945 NESP48681 1621 aa9.72□□□□□ -0.85
SRRD-203ENST00000477945 ABCA10Q8WWZ4 1543 aa9.72□□□□□ -0.85
SRRD-203ENST00000477945 PDS5BQ9NTI5 1447 aa9.71□□□□□ -0.86
SRRD-203ENST00000477945 WDR97A6NE52 1622 aa9.7□□□□□ -0.86
SRRD-203ENST00000477945 IGF1RP08069 1367 aa9.69□□□□□ -0.86
SRRD-203ENST00000477945 POLA1P09884 1462 aaPredicted RBP9.69□□□□□ -0.86
SRRD-203ENST00000477945 CUL7Q14999 1698 aa9.67□□□□□ -0.86
SRRD-203ENST00000477945 URB2Q14146 1524 aaKnown RBP9.67□□□□□ -0.86
SRRD-203ENST00000477945 ZEB1P37275 1124 aaPredicted RBP9.67□□□□□ -0.86
SRRD-203ENST00000477945 DMRT2Q9Y5R5 561 aa9.66□□□□□ -0.86
SRRD-203ENST00000477945 KIF21AQ7Z4S6 1674 aa9.66□□□□□ -0.86
SRRD-203ENST00000477945 ARAP1Q96P48 1450 aa9.65□□□□□ -0.87
SRRD-203ENST00000477945 CARMIL1Q5VZK9 1371 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms