RNA–Protein interactions for RNA: ENST00000477049.1

SETX-205, Transcript of senataxin, humanhuman

TSL 3

Gene SETX, Length 4,067 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETX-205ENST00000477049 NISCHQ9Y2I1 1504 aa15.25■□□□□ 0.03
SETX-205ENST00000477049 SHROOM4Q9ULL8 1493 aa12.98□□□□□ -0.33
SETX-205ENST00000477049 CCDC180Q9P1Z9 1646 aa12.97□□□□□ -0.33
SETX-205ENST00000477049 ZCCHC6Q5VYS8 1495 aaKnown RBP12.89□□□□□ -0.35
SETX-205ENST00000477049 SUPT5HO00267 1087 aaKnown RBP12.68□□□□□ -0.38
SETX-205ENST00000477049 DCAF8L2P0C7V8 631 aa12.66□□□□□ -0.38
SETX-205ENST00000477049 DCAF1Q9Y4B6 1507 aa12.49□□□□□ -0.41
SETX-205ENST00000477049 CHIC1Q5VXU3 224 aa12.31□□□□□ -0.44
SETX-205ENST00000477049 MYO15BQ96JP2 1530 aa12.28□□□□□ -0.44
SETX-205ENST00000477049 SCRIBQ14160 1630 aa12.18□□□□□ -0.46
SETX-205ENST00000477049 ABCC9O60706 1549 aa12.15□□□□□ -0.46
SETX-205ENST00000477049 RSF1Q96T23 1441 aaPredicted RBP12.06□□□□□ -0.48
SETX-205ENST00000477049 NACADO15069 1562 aa12.01□□□□□ -0.49
SETX-205ENST00000477049 LOC105371045A0A1W2PR82 267 aa11.96□□□□□ -0.5
SETX-205ENST00000477049 RB1CC1Q8TDY2 1594 aa11.93□□□□□ -0.5
SETX-205ENST00000477049 CECR2Q9BXF3 1484 aa11.93□□□□□ -0.5
SETX-205ENST00000477049 MROH2BQ7Z745 1585 aa11.87□□□□□ -0.51
SETX-205ENST00000477049 PCGF6Q9BYE7 350 aa11.85□□□□□ -0.51
SETX-205ENST00000477049 HRCP23327 699 aa11.8□□□□□ -0.52
SETX-205ENST00000477049 WIZO95785 1651 aa11.8□□□□□ -0.52
SETX-205ENST00000477049 TRIM41Q8WV44 630 aa11.8□□□□□ -0.52
SETX-205ENST00000477049 FAM9AQ8IZU1 332 aaPredicted RBP11.73□□□□□ -0.53
SETX-205ENST00000477049 BAZ1AQ9NRL2 1556 aaPredicted RBP11.7□□□□□ -0.54
SETX-205ENST00000477049 UNC13AQ9UPW8 1703 aa11.68□□□□□ -0.54
SETX-205ENST00000477049 EHMT2Q96KQ7 1210 aa11.65□□□□□ -0.55
SETX-205ENST00000477049 SMARCA4P51532 1647 aa11.63□□□□□ -0.55
SETX-205ENST00000477049 EIF4G1Q04637 1599 aaKnown RBP11.63□□□□□ -0.55
SETX-205ENST00000477049 TRIM26Q12899 539 aaPredicted RBP11.62□□□□□ -0.55
SETX-205ENST00000477049 PPARGC1BQ86YN6 1023 aaKnown RBP11.61□□□□□ -0.55
SETX-205ENST00000477049 TOP2AP11388 1531 aaKnown RBP11.6□□□□□ -0.55
SETX-205ENST00000477049 PABPN1Q86U42 306 aaKnown RBP eCLIP11.57□□□□□ -0.56
SETX-205ENST00000477049 CCDC88BA6NC98 1476 aa11.56□□□□□ -0.56
SETX-205ENST00000477049 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
SETX-205ENST00000477049 BICRAQ9NZM4 1560 aa11.54□□□□□ -0.56
SETX-205ENST00000477049 ABCC8Q09428 1581 aa11.52□□□□□ -0.56
SETX-205ENST00000477049 SOGA1O94964 1423 aa11.4□□□□□ -0.58
SETX-205ENST00000477049 PEG3Q9GZU2 1588 aa11.4□□□□□ -0.58
SETX-205ENST00000477049 RUSC2Q8N2Y8 1516 aa11.36□□□□□ -0.59
SETX-205ENST00000477049 ATAD2BQ9ULI0 1458 aa11.35□□□□□ -0.59
SETX-205ENST00000477049 WRNQ14191 1432 aaPredicted RBP eCLIP11.31□□□□□ -0.6
SETX-205ENST00000477049 BAZ1BQ9UIG0 1483 aaKnown RBP11.3□□□□□ -0.6
SETX-205ENST00000477049 CEP162Q5TB80 1403 aa11.3□□□□□ -0.6
SETX-205ENST00000477049 CSRNP3Q8WYN3 585 aa11.3□□□□□ -0.6
SETX-205ENST00000477049 ZEB1P37275 1124 aaPredicted RBP11.3□□□□□ -0.6
SETX-205ENST00000477049 SYNJ1O43426 1573 aa11.28□□□□□ -0.6
SETX-205ENST00000477049 EEA1Q15075 1411 aa11.28□□□□□ -0.6
SETX-205ENST00000477049 TNIKQ9UKE5 1360 aa11.27□□□□□ -0.6
SETX-205ENST00000477049 TTBK1Q5TCY1 1321 aaPredicted RBP11.25□□□□□ -0.61
SETX-205ENST00000477049 UBTFP17480 764 aaKnown RBP11.25□□□□□ -0.61
SETX-205ENST00000477049 GOLGA3Q08378 1498 aa11.22□□□□□ -0.61
SETX-205ENST00000477049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.2□□□□□ -0.62
SETX-205ENST00000477049 CEP164Q9UPV0 1460 aa11.16□□□□□ -0.62
SETX-205ENST00000477049 KIF21BO75037 1637 aa11.15□□□□□ -0.62
SETX-205ENST00000477049 CCER1Q8TC90 406 aaPredicted RBP11.14□□□□□ -0.63
SETX-205ENST00000477049 TOP2BQ02880 1626 aa11.13□□□□□ -0.63
SETX-205ENST00000477049 NCAPD3P42695 1498 aa11.12□□□□□ -0.63
SETX-205ENST00000477049 RAPGEF2Q9Y4G8 1499 aa11.12□□□□□ -0.63
SETX-205ENST00000477049 HMGXB3Q12766 1538 aa11.11□□□□□ -0.63
SETX-205ENST00000477049 CLIP1P30622 1438 aa11.1□□□□□ -0.63
SETX-205ENST00000477049 BIVM-ERCC5R4GMW8 1640 aa11.09□□□□□ -0.63
SETX-205ENST00000477049 APLP2Q06481 763 aa11.09□□□□□ -0.63
SETX-205ENST00000477049 RANGAP1P46060 587 aaPredicted RBP11.07□□□□□ -0.64
SETX-205ENST00000477049 CUX1P39880 1505 aa11.05□□□□□ -0.64
SETX-205ENST00000477049 VPS8Q8N3P4 1428 aa11.04□□□□□ -0.64
SETX-205ENST00000477049 CFTRP13569 1480 aa11.03□□□□□ -0.64
SETX-205ENST00000477049 PRXQ9BXM0 1461 aa11.01□□□□□ -0.65
SETX-205ENST00000477049 CENPBP07199 599 aaPredicted RBP10.98□□□□□ -0.65
SETX-205ENST00000477049 ERICH3Q5RHP9 1530 aa10.98□□□□□ -0.65
SETX-205ENST00000477049 HNRNPUL2Q1KMD3 747 aaKnown RBP10.98□□□□□ -0.65
SETX-205ENST00000477049 KIF27Q86VH2 1401 aa10.95□□□□□ -0.66
SETX-205ENST00000477049 ARAP1Q96P48 1450 aa10.95□□□□□ -0.66
SETX-205ENST00000477049 PELP1Q8IZL8 1130 aaKnown RBP10.93□□□□□ -0.66
SETX-205ENST00000477049 CADPSQ9ULU8 1353 aa10.91□□□□□ -0.66
SETX-205ENST00000477049 PRDM2Q13029 1718 aa10.91□□□□□ -0.66
SETX-205ENST00000477049 CC2D2AQ9P2K1 1620 aa10.89□□□□□ -0.67
SETX-205ENST00000477049 KANK4Q5T7N3 995 aaPredicted RBP10.89□□□□□ -0.67
SETX-205ENST00000477049 DIEXFQ68CQ4 756 aaKnown RBP10.88□□□□□ -0.67
SETX-205ENST00000477049 CUX2O14529 1486 aa10.88□□□□□ -0.67
SETX-205ENST00000477049 IGF1RP08069 1367 aa10.87□□□□□ -0.67
SETX-205ENST00000477049 ARHGAP35Q9NRY4 1499 aa10.86□□□□□ -0.67
SETX-205ENST00000477049 FGD5Q6ZNL6 1462 aa10.86□□□□□ -0.67
SETX-205ENST00000477049 SCAF1Q9H7N4 1312 aaKnown RBP10.85□□□□□ -0.67
SETX-205ENST00000477049 ZNF316A6NFI3 1004 aaPredicted RBP10.82□□□□□ -0.68
SETX-205ENST00000477049 FANCD2Q9BXW9 1451 aa10.81□□□□□ -0.68
SETX-205ENST00000477049 CARMIL1Q5VZK9 1371 aa10.8□□□□□ -0.68
SETX-205ENST00000477049 NESP48681 1621 aa10.78□□□□□ -0.68
SETX-205ENST00000477049 RRBP1Q9P2E9 1410 aaKnown RBP10.78□□□□□ -0.68
SETX-205ENST00000477049 RAD54L2Q9Y4B4 1467 aa10.77□□□□□ -0.69
SETX-205ENST00000477049 NEUROD1Q13562 356 aa10.77□□□□□ -0.69
SETX-205ENST00000477049 DHX57Q6P158 1386 aaKnown RBP10.76□□□□□ -0.69
SETX-205ENST00000477049 YTHDC1Q96MU7 727 aaKnown RBP10.75□□□□□ -0.69
SETX-205ENST00000477049 ACIN1Q9UKV3 1341 aaKnown RBP10.75□□□□□ -0.69
SETX-205ENST00000477049 DNMBPQ6XZF7 1577 aa10.74□□□□□ -0.69
SETX-205ENST00000477049 TOPBP1Q92547 1522 aa10.74□□□□□ -0.69
SETX-205ENST00000477049 POLA1P09884 1462 aaPredicted RBP10.74□□□□□ -0.69
SETX-205ENST00000477049 CCNB3Q8WWL7 1395 aa10.73□□□□□ -0.69
SETX-205ENST00000477049 P3H3Q8IVL6 736 aa10.72□□□□□ -0.69
SETX-205ENST00000477049 ABCA10Q8WWZ4 1543 aa10.72□□□□□ -0.69
SETX-205ENST00000477049 TIAM1Q13009 1591 aa10.72□□□□□ -0.69
SETX-205ENST00000477049 ITGAEP38570 1179 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms