RNA–Protein interactions for RNA: ENST00000476620.1

EPDR1-204, Transcript of ependymin related 1, humanhuman

TSL 4 BASIC

Gene EPDR1, Length 555 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-204ENST00000476620 AEBP2Q6ZN18 517 aaPredicted RBP19.69■□□□□ 0.74
EPDR1-204ENST00000476620 CHIC1Q5VXU3 224 aa18.48■□□□□ 0.55
EPDR1-204ENST00000476620 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
EPDR1-204ENST00000476620 PHF23Q9BUL5 403 aaPredicted RBP16.64■□□□□ 0.25
EPDR1-204ENST00000476620 FOXD1Q16676 465 aa15.77■□□□□ 0.12
EPDR1-204ENST00000476620 POTEDQ86YR6 584 aa15.13■□□□□ 0.01
EPDR1-204ENST00000476620 NISCHQ9Y2I1 1504 aa15.02■□□□□ -0
EPDR1-204ENST00000476620 MSH5O43196 834 aa14.95□□□□□ -0.02
EPDR1-204ENST00000476620 PIAS4Q8N2W9 510 aaPredicted RBP14.67□□□□□ -0.06
EPDR1-204ENST00000476620 ABCC9O60706 1549 aa14.61□□□□□ -0.07
EPDR1-204ENST00000476620 PLPPR3Q6T4P5 718 aa14.59□□□□□ -0.07
EPDR1-204ENST00000476620 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
EPDR1-204ENST00000476620 PPP6R1Q9UPN7 881 aa14.47□□□□□ -0.09
EPDR1-204ENST00000476620 ADRA2BP18089 450 aa14.41□□□□□ -0.1
EPDR1-204ENST00000476620 PABPN1Q86U42 306 aaKnown RBP eCLIP13.72□□□□□ -0.21
EPDR1-204ENST00000476620 DNAJC5Q9H3Z4 198 aa13.66□□□□□ -0.22
EPDR1-204ENST00000476620 CCDC180Q9P1Z9 1646 aa13.44□□□□□ -0.26
EPDR1-204ENST00000476620 DCAF8L2P0C7V8 631 aa13.44□□□□□ -0.26
EPDR1-204ENST00000476620 MAPK8IP2Q13387 824 aaPredicted RBP13.34□□□□□ -0.27
EPDR1-204ENST00000476620 DMRT2Q9Y5R5 561 aa13.34□□□□□ -0.27
EPDR1-204ENST00000476620 RB1CC1Q8TDY2 1594 aa13.3□□□□□ -0.28
EPDR1-204ENST00000476620 SCAF1Q9H7N4 1312 aaKnown RBP13.3□□□□□ -0.28
EPDR1-204ENST00000476620 CECR2Q9BXF3 1484 aa13.16□□□□□ -0.3
EPDR1-204ENST00000476620 BICRAQ9NZM4 1560 aa13.04□□□□□ -0.32
EPDR1-204ENST00000476620 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
EPDR1-204ENST00000476620 NACADO15069 1562 aa13.03□□□□□ -0.32
EPDR1-204ENST00000476620 CC2D2AQ9P2K1 1620 aa12.96□□□□□ -0.33
EPDR1-204ENST00000476620 TRIM41Q8WV44 630 aa12.96□□□□□ -0.33
EPDR1-204ENST00000476620 UNC13AQ9UPW8 1703 aa12.85□□□□□ -0.35
EPDR1-204ENST00000476620 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
EPDR1-204ENST00000476620 EIF4G1Q04637 1599 aaKnown RBP12.76□□□□□ -0.37
EPDR1-204ENST00000476620 HOXD11P31277 338 aaPredicted RBP12.73□□□□□ -0.37
EPDR1-204ENST00000476620 PPP4R3CPQ6ZMV5 832 aa12.72□□□□□ -0.37
EPDR1-204ENST00000476620 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
EPDR1-204ENST00000476620 CUX2O14529 1486 aa12.62□□□□□ -0.39
EPDR1-204ENST00000476620 CNKSR2Q8WXI2 1034 aa12.59□□□□□ -0.39
EPDR1-204ENST00000476620 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
EPDR1-204ENST00000476620 SCRIBQ14160 1630 aa12.58□□□□□ -0.4
EPDR1-204ENST00000476620 RNF216Q9NWF9 866 aaPredicted RBP12.56□□□□□ -0.4
EPDR1-204ENST00000476620 MYO15BQ96JP2 1530 aa12.54□□□□□ -0.4
EPDR1-204ENST00000476620 SHROOM4Q9ULL8 1493 aa12.53□□□□□ -0.4
EPDR1-204ENST00000476620 C1QBPQ07021 282 aaKnown RBP12.53□□□□□ -0.4
EPDR1-204ENST00000476620 NESP48681 1621 aa12.37□□□□□ -0.43
EPDR1-204ENST00000476620 ZCCHC6Q5VYS8 1495 aaKnown RBP12.26□□□□□ -0.45
EPDR1-204ENST00000476620 NCBP3Q53F19 620 aaKnown RBP12.19□□□□□ -0.46
EPDR1-204ENST00000476620 OSCARQ8IYS5 282 aa12.19□□□□□ -0.46
EPDR1-204ENST00000476620 NCAPD3P42695 1498 aa12.18□□□□□ -0.46
EPDR1-204ENST00000476620 DCAF1Q9Y4B6 1507 aa12.17□□□□□ -0.46
EPDR1-204ENST00000476620 TRHP20396 242 aaPredicted RBP12.17□□□□□ -0.46
EPDR1-204ENST00000476620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.15□□□□□ -0.46
EPDR1-204ENST00000476620 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
EPDR1-204ENST00000476620 ATAD2BQ9ULI0 1458 aa12.1□□□□□ -0.47
EPDR1-204ENST00000476620 THOC2Q8NI27 1593 aaKnown RBP12.09□□□□□ -0.47
EPDR1-204ENST00000476620 CYB5RLQ6IPT4 315 aa12.08□□□□□ -0.48
EPDR1-204ENST00000476620 PDS5BQ9NTI5 1447 aa11.98□□□□□ -0.49
EPDR1-204ENST00000476620 NPM3O75607 178 aaKnown RBP11.93□□□□□ -0.5
EPDR1-204ENST00000476620 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
EPDR1-204ENST00000476620 BAZ1BQ9UIG0 1483 aaKnown RBP11.91□□□□□ -0.5
EPDR1-204ENST00000476620 MRC2Q9UBG0 1479 aa11.9□□□□□ -0.5
EPDR1-204ENST00000476620 RIMBP3CA6NJZ7 1639 aa11.9□□□□□ -0.5
EPDR1-204ENST00000476620 RIMBP3BA6NNM3 1639 aa11.9□□□□□ -0.5
EPDR1-204ENST00000476620 RIMBP3Q9UFD9 1639 aa11.9□□□□□ -0.5
EPDR1-204ENST00000476620 ILDR1Q86SU0 546 aaPredicted RBP11.9□□□□□ -0.5
EPDR1-204ENST00000476620 KIF21AQ7Z4S6 1674 aa11.89□□□□□ -0.51
EPDR1-204ENST00000476620 HMGXB3Q12766 1538 aa11.87□□□□□ -0.51
EPDR1-204ENST00000476620 CADPSQ9ULU8 1353 aa11.86□□□□□ -0.51
EPDR1-204ENST00000476620 LAMC3Q9Y6N6 1575 aa11.85□□□□□ -0.51
EPDR1-204ENST00000476620 ARHGEF11O15085 1522 aa11.85□□□□□ -0.51
EPDR1-204ENST00000476620 WDR62O43379 1518 aa11.81□□□□□ -0.52
EPDR1-204ENST00000476620 POTEHQ6S545 545 aa11.8□□□□□ -0.52
EPDR1-204ENST00000476620 U3KPZ7 1027 aaPredicted RBP11.8□□□□□ -0.52
EPDR1-204ENST00000476620 SMARCA4P51532 1647 aa11.78□□□□□ -0.52
EPDR1-204ENST00000476620 CAPN15O75808 1086 aa11.77□□□□□ -0.53
EPDR1-204ENST00000476620 DSG3P32926 999 aa11.77□□□□□ -0.53
EPDR1-204ENST00000476620 FBLN2P98095 1184 aa11.75□□□□□ -0.53
EPDR1-204ENST00000476620 ARAP1Q96P48 1450 aa11.74□□□□□ -0.53
EPDR1-204ENST00000476620 SPINK5Q9NQ38 1064 aaPredicted RBP11.73□□□□□ -0.53
EPDR1-204ENST00000476620 ZNF608Q9ULD9 1512 aaPredicted RBP11.71□□□□□ -0.53
EPDR1-204ENST00000476620 FANCD2Q9BXW9 1451 aa11.7□□□□□ -0.54
EPDR1-204ENST00000476620 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
EPDR1-204ENST00000476620 MROH2BQ7Z745 1585 aa11.67□□□□□ -0.54
EPDR1-204ENST00000476620 URB2Q14146 1524 aaKnown RBP11.66□□□□□ -0.54
EPDR1-204ENST00000476620 PEG3Q9GZU2 1588 aa11.57□□□□□ -0.56
EPDR1-204ENST00000476620 AQRO60306 1485 aaKnown RBP eCLIP11.57□□□□□ -0.56
EPDR1-204ENST00000476620 APLP2Q06481 763 aa11.55□□□□□ -0.56
EPDR1-204ENST00000476620 KDM4FA0A1W2PPD8 638 aa11.54□□□□□ -0.56
EPDR1-204ENST00000476620 CFTRP13569 1480 aa11.51□□□□□ -0.57
EPDR1-204ENST00000476620 IFT140Q96RY7 1462 aa11.5□□□□□ -0.57
EPDR1-204ENST00000476620 ZNF219Q9P2Y4 722 aaPredicted RBP11.49□□□□□ -0.57
EPDR1-204ENST00000476620 RSF1Q96T23 1441 aaPredicted RBP11.48□□□□□ -0.57
EPDR1-204ENST00000476620 SLC4A2P04920 1241 aa11.46□□□□□ -0.57
EPDR1-204ENST00000476620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
EPDR1-204ENST00000476620 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
EPDR1-204ENST00000476620 CHMP7Q8WUX9 453 aaPredicted RBP11.44□□□□□ -0.58
EPDR1-204ENST00000476620 TDRD9Q8NDG6 1382 aaKnown RBP11.43□□□□□ -0.58
EPDR1-204ENST00000476620 ABCB7O75027 752 aa11.43□□□□□ -0.58
EPDR1-204ENST00000476620 WIZO95785 1651 aa11.41□□□□□ -0.58
EPDR1-204ENST00000476620 EIF4G3O43432 1585 aaKnown RBP11.37□□□□□ -0.59
EPDR1-204ENST00000476620 TOPBP1Q92547 1522 aa11.37□□□□□ -0.59
EPDR1-204ENST00000476620 KCNA4P22459 653 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 531.3 ms