RNA–Protein interactions for RNA: ENST00000476167.5

CCNB3-205, Transcript of cyclin B3, humanhuman

TSL 5

Gene CCNB3, Length 1,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-205ENST00000476167 AEBP2Q6ZN18 517 aaPredicted RBP26.63■■□□□ 1.85
CCNB3-205ENST00000476167 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
CCNB3-205ENST00000476167 SENP3Q9H4L4 574 aaPredicted RBP22.77■■□□□ 1.24
CCNB3-205ENST00000476167 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
CCNB3-205ENST00000476167 NISCHQ9Y2I1 1504 aa22.11■■□□□ 1.13
CCNB3-205ENST00000476167 FOXD1Q16676 465 aa21.27■■□□□ 1
CCNB3-205ENST00000476167 POTEDQ86YR6 584 aa20.43■□□□□ 0.86
CCNB3-205ENST00000476167 MSH5O43196 834 aa20.1■□□□□ 0.81
CCNB3-205ENST00000476167 PIAS4Q8N2W9 510 aaPredicted RBP19.73■□□□□ 0.75
CCNB3-205ENST00000476167 CCDC180Q9P1Z9 1646 aa19.65■□□□□ 0.74
CCNB3-205ENST00000476167 PLPPR3Q6T4P5 718 aa19.58■□□□□ 0.73
CCNB3-205ENST00000476167 PPP6R1Q9UPN7 881 aa19.51■□□□□ 0.71
CCNB3-205ENST00000476167 ABCC9O60706 1549 aa19.45■□□□□ 0.7
CCNB3-205ENST00000476167 ADRA2BP18089 450 aa19.4■□□□□ 0.7
CCNB3-205ENST00000476167 DCAF8L2P0C7V8 631 aa18.59■□□□□ 0.57
CCNB3-205ENST00000476167 RB1CC1Q8TDY2 1594 aa18.57■□□□□ 0.56
CCNB3-205ENST00000476167 NACADO15069 1562 aa18.5■□□□□ 0.55
CCNB3-205ENST00000476167 ZCCHC6Q5VYS8 1495 aaKnown RBP18.39■□□□□ 0.53
CCNB3-205ENST00000476167 MYO15BQ96JP2 1530 aa18.31■□□□□ 0.52
CCNB3-205ENST00000476167 DCAF1Q9Y4B6 1507 aa18.24■□□□□ 0.51
CCNB3-205ENST00000476167 UNC13AQ9UPW8 1703 aa18.22■□□□□ 0.51
CCNB3-205ENST00000476167 PABPN1Q86U42 306 aaKnown RBP eCLIP18.18■□□□□ 0.5
CCNB3-205ENST00000476167 BICRAQ9NZM4 1560 aa18.08■□□□□ 0.49
CCNB3-205ENST00000476167 SCRIBQ14160 1630 aa18.03■□□□□ 0.48
CCNB3-205ENST00000476167 DNAJC5BQ9UF47 199 aa18.01■□□□□ 0.47
CCNB3-205ENST00000476167 DMRT2Q9Y5R5 561 aa18.01■□□□□ 0.47
CCNB3-205ENST00000476167 MAPK8IP2Q13387 824 aaPredicted RBP17.96■□□□□ 0.47
CCNB3-205ENST00000476167 SCAF1Q9H7N4 1312 aaKnown RBP17.74■□□□□ 0.43
CCNB3-205ENST00000476167 SHROOM4Q9ULL8 1493 aa17.73■□□□□ 0.43
CCNB3-205ENST00000476167 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
CCNB3-205ENST00000476167 CC2D2AQ9P2K1 1620 aa17.56■□□□□ 0.4
CCNB3-205ENST00000476167 CACNB1Q02641 598 aaPredicted RBP17.47■□□□□ 0.39
CCNB3-205ENST00000476167 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
CCNB3-205ENST00000476167 SMARCA4P51532 1647 aa17.19■□□□□ 0.34
CCNB3-205ENST00000476167 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
CCNB3-205ENST00000476167 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
CCNB3-205ENST00000476167 RNF39Q9H2S5 420 aa17.13■□□□□ 0.33
CCNB3-205ENST00000476167 ATAD2BQ9ULI0 1458 aa17.12■□□□□ 0.33
CCNB3-205ENST00000476167 BAZ1AQ9NRL2 1556 aaPredicted RBP17.11■□□□□ 0.33
CCNB3-205ENST00000476167 NCAPD3P42695 1498 aa17.09■□□□□ 0.33
CCNB3-205ENST00000476167 MROH2BQ7Z745 1585 aa17.09■□□□□ 0.33
CCNB3-205ENST00000476167 PPP4R3CPQ6ZMV5 832 aa17.09■□□□□ 0.33
CCNB3-205ENST00000476167 SMARCA2P51531 1590 aa17.04■□□□□ 0.32
CCNB3-205ENST00000476167 HMGXB3Q12766 1538 aa16.99■□□□□ 0.31
CCNB3-205ENST00000476167 PEG3Q9GZU2 1588 aa16.97■□□□□ 0.31
CCNB3-205ENST00000476167 BAZ1BQ9UIG0 1483 aaKnown RBP16.96■□□□□ 0.31
CCNB3-205ENST00000476167 WIZO95785 1651 aa16.9■□□□□ 0.3
CCNB3-205ENST00000476167 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
CCNB3-205ENST00000476167 RNF216Q9NWF9 866 aaPredicted RBP16.89■□□□□ 0.29
CCNB3-205ENST00000476167 C1QBPQ07021 282 aaKnown RBP16.83■□□□□ 0.28
CCNB3-205ENST00000476167 NESP48681 1621 aa16.83■□□□□ 0.28
CCNB3-205ENST00000476167 RSF1Q96T23 1441 aaPredicted RBP16.82■□□□□ 0.28
CCNB3-205ENST00000476167 ERCC6Q03468 1493 aa16.72■□□□□ 0.27
CCNB3-205ENST00000476167 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
CCNB3-205ENST00000476167 LAMC3Q9Y6N6 1575 aa16.65■□□□□ 0.26
CCNB3-205ENST00000476167 CADPSQ9ULU8 1353 aa16.6■□□□□ 0.25
CCNB3-205ENST00000476167 SUPT5HO00267 1087 aaKnown RBP16.59■□□□□ 0.25
CCNB3-205ENST00000476167 KIF21AQ7Z4S6 1674 aa16.58■□□□□ 0.25
CCNB3-205ENST00000476167 THOC2Q8NI27 1593 aaKnown RBP16.54■□□□□ 0.24
CCNB3-205ENST00000476167 CUX2O14529 1486 aa16.54■□□□□ 0.24
CCNB3-205ENST00000476167 PDS5BQ9NTI5 1447 aa16.53■□□□□ 0.24
CCNB3-205ENST00000476167 CCDC88BA6NC98 1476 aa16.5■□□□□ 0.23
CCNB3-205ENST00000476167 CFTRP13569 1480 aa16.48■□□□□ 0.23
CCNB3-205ENST00000476167 FANCD2Q9BXW9 1451 aa16.43■□□□□ 0.22
CCNB3-205ENST00000476167 MRC2Q9UBG0 1479 aa16.41■□□□□ 0.22
CCNB3-205ENST00000476167 CEP164Q9UPV0 1460 aa16.41■□□□□ 0.22
CCNB3-205ENST00000476167 WDR62O43379 1518 aa16.36■□□□□ 0.21
CCNB3-205ENST00000476167 PRDM2Q13029 1718 aa16.33■□□□□ 0.2
CCNB3-205ENST00000476167 URB2Q14146 1524 aaKnown RBP16.31■□□□□ 0.2
CCNB3-205ENST00000476167 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.2
CCNB3-205ENST00000476167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.25■□□□□ 0.19
CCNB3-205ENST00000476167 DNAJC5Q9H3Z4 198 aa16.2■□□□□ 0.18
CCNB3-205ENST00000476167 TOPBP1Q92547 1522 aa16.17■□□□□ 0.18
CCNB3-205ENST00000476167 DNMBPQ6XZF7 1577 aa16.12■□□□□ 0.17
CCNB3-205ENST00000476167 ZNF608Q9ULD9 1512 aaPredicted RBP16.08■□□□□ 0.16
CCNB3-205ENST00000476167 NPM3O75607 178 aaKnown RBP16.07■□□□□ 0.16
CCNB3-205ENST00000476167 ABCC8Q09428 1581 aa16.06■□□□□ 0.16
CCNB3-205ENST00000476167 IFT140Q96RY7 1462 aa16.05■□□□□ 0.16
CCNB3-205ENST00000476167 CUX1P39880 1505 aa16.03■□□□□ 0.16
CCNB3-205ENST00000476167 POLA1P09884 1462 aaPredicted RBP16.02■□□□□ 0.16
CCNB3-205ENST00000476167 RAD54L2Q9Y4B4 1467 aa16■□□□□ 0.15
CCNB3-205ENST00000476167 TARBP1Q13395 1621 aaKnown RBP16■□□□□ 0.15
CCNB3-205ENST00000476167 FGD5Q6ZNL6 1462 aa15.98■□□□□ 0.15
CCNB3-205ENST00000476167 EIF4G3O43432 1585 aaKnown RBP15.97■□□□□ 0.15
CCNB3-205ENST00000476167 AQRO60306 1485 aaKnown RBP eCLIP15.96■□□□□ 0.15
CCNB3-205ENST00000476167 SOGA1O94964 1423 aa15.94■□□□□ 0.14
CCNB3-205ENST00000476167 U3KPZ7 1027 aaPredicted RBP15.94■□□□□ 0.14
CCNB3-205ENST00000476167 TDRD9Q8NDG6 1382 aaKnown RBP15.92■□□□□ 0.14
CCNB3-205ENST00000476167 POTEHQ6S545 545 aa15.9■□□□□ 0.14
CCNB3-205ENST00000476167 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
CCNB3-205ENST00000476167 SYNJ1O43426 1573 aa15.86■□□□□ 0.13
CCNB3-205ENST00000476167 DSG3P32926 999 aa15.86■□□□□ 0.13
CCNB3-205ENST00000476167 OSCARQ8IYS5 282 aa15.85■□□□□ 0.13
CCNB3-205ENST00000476167 WDR97A6NE52 1622 aa15.84■□□□□ 0.13
CCNB3-205ENST00000476167 SPINK5Q9NQ38 1064 aaPredicted RBP15.82■□□□□ 0.12
CCNB3-205ENST00000476167 TOP2BQ02880 1626 aa15.82■□□□□ 0.12
CCNB3-205ENST00000476167 BIVM-ERCC5R4GMW8 1640 aa15.82■□□□□ 0.12
CCNB3-205ENST00000476167 CHD1O14646 1710 aa15.8■□□□□ 0.12
CCNB3-205ENST00000476167 SNAPC4Q5SXM2 1469 aa15.79■□□□□ 0.12
CCNB3-205ENST00000476167 FBLN2P98095 1184 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms