RNA–Protein interactions for RNA: ENST00000474900.5

NTM-212, Transcript of neurotrimin, humanhuman

TSL 3

Gene NTM, Length 2,512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTM-212ENST00000474900 NISCHQ9Y2I1 1504 aa30.54■■■□□ 2.48
NTM-212ENST00000474900 CCDC180Q9P1Z9 1646 aa26.76■■□□□ 1.87
NTM-212ENST00000474900 ZCCHC6Q5VYS8 1495 aaKnown RBP25.7■■□□□ 1.71
NTM-212ENST00000474900 DCAF1Q9Y4B6 1507 aa25.39■■□□□ 1.66
NTM-212ENST00000474900 HRCP23327 699 aa25.26■■□□□ 1.63
NTM-212ENST00000474900 SHROOM4Q9ULL8 1493 aa25.19■■□□□ 1.62
NTM-212ENST00000474900 MYO15BQ96JP2 1530 aa25.09■■□□□ 1.61
NTM-212ENST00000474900 SUPT5HO00267 1087 aaKnown RBP25.03■■□□□ 1.6
NTM-212ENST00000474900 ABCC9O60706 1549 aa24.94■■□□□ 1.58
NTM-212ENST00000474900 NACADO15069 1562 aa24.83■■□□□ 1.57
NTM-212ENST00000474900 DCAF8L2P0C7V8 631 aa24.83■■□□□ 1.57
NTM-212ENST00000474900 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
NTM-212ENST00000474900 PCGF6Q9BYE7 350 aa24.65■■□□□ 1.54
NTM-212ENST00000474900 RB1CC1Q8TDY2 1594 aa24.58■■□□□ 1.52
NTM-212ENST00000474900 PPARGC1BQ86YN6 1023 aaKnown RBP24.45■■□□□ 1.51
NTM-212ENST00000474900 SCRIBQ14160 1630 aa24.41■■□□□ 1.5
NTM-212ENST00000474900 PELP1Q8IZL8 1130 aaKnown RBP24.23■■□□□ 1.47
NTM-212ENST00000474900 TRIM26Q12899 539 aaPredicted RBP24.13■■□□□ 1.45
NTM-212ENST00000474900 UNC13AQ9UPW8 1703 aa24.12■■□□□ 1.45
NTM-212ENST00000474900 ZEB1P37275 1124 aaPredicted RBP23.99■■□□□ 1.43
NTM-212ENST00000474900 LOC105371045A0A1W2PR82 267 aa23.98■■□□□ 1.43
NTM-212ENST00000474900 BICRAQ9NZM4 1560 aa23.82■■□□□ 1.4
NTM-212ENST00000474900 RSF1Q96T23 1441 aaPredicted RBP23.66■■□□□ 1.38
NTM-212ENST00000474900 SCAF1Q9H7N4 1312 aaKnown RBP23.65■■□□□ 1.38
NTM-212ENST00000474900 CECR2Q9BXF3 1484 aa23.62■■□□□ 1.37
NTM-212ENST00000474900 BAZ1AQ9NRL2 1556 aaPredicted RBP23.61■■□□□ 1.37
NTM-212ENST00000474900 MROH2BQ7Z745 1585 aa23.54■■□□□ 1.36
NTM-212ENST00000474900 SMARCA4P51532 1647 aa23.49■■□□□ 1.35
NTM-212ENST00000474900 PABPN1Q86U42 306 aaKnown RBP eCLIP23.42■■□□□ 1.34
NTM-212ENST00000474900 WIZO95785 1651 aa23.37■■□□□ 1.33
NTM-212ENST00000474900 TRIM41Q8WV44 630 aa23.33■■□□□ 1.33
NTM-212ENST00000474900 MYT1Q01538 1121 aa23.3■■□□□ 1.32
NTM-212ENST00000474900 PEG3Q9GZU2 1588 aa23.29■■□□□ 1.32
NTM-212ENST00000474900 ACIN1Q9UKV3 1341 aaKnown RBP23.24■■□□□ 1.31
NTM-212ENST00000474900 TOP2AP11388 1531 aaKnown RBP23.2■■□□□ 1.3
NTM-212ENST00000474900 SMARCA2P51531 1590 aa23.09■■□□□ 1.29
NTM-212ENST00000474900 NEUROD1Q13562 356 aa23.08■■□□□ 1.28
NTM-212ENST00000474900 EIF4G1Q04637 1599 aaKnown RBP23.07■■□□□ 1.28
NTM-212ENST00000474900 FAM9AQ8IZU1 332 aaPredicted RBP23.06■■□□□ 1.28
NTM-212ENST00000474900 ATAD2BQ9ULI0 1458 aa23.03■■□□□ 1.28
NTM-212ENST00000474900 CENPBP07199 599 aaPredicted RBP23.03■■□□□ 1.28
NTM-212ENST00000474900 CCER1Q8TC90 406 aaPredicted RBP22.95■■□□□ 1.26
NTM-212ENST00000474900 GTF3C3Q9Y5Q9 886 aa22.93■■□□□ 1.26
NTM-212ENST00000474900 DIEXFQ68CQ4 756 aaKnown RBP22.91■■□□□ 1.26
NTM-212ENST00000474900 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
NTM-212ENST00000474900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.9■■□□□ 1.26
NTM-212ENST00000474900 BAZ1BQ9UIG0 1483 aaKnown RBP22.89■■□□□ 1.26
NTM-212ENST00000474900 CCDC88BA6NC98 1476 aa22.87■■□□□ 1.25
NTM-212ENST00000474900 NCAPD3P42695 1498 aa22.87■■□□□ 1.25
NTM-212ENST00000474900 WRNQ14191 1432 aaPredicted RBP eCLIP22.78■■□□□ 1.24
NTM-212ENST00000474900 EHMT2Q96KQ7 1210 aa22.76■■□□□ 1.23
NTM-212ENST00000474900 CC2D2AQ9P2K1 1620 aa22.69■■□□□ 1.22
NTM-212ENST00000474900 ZNF316A6NFI3 1004 aaPredicted RBP22.59■■□□□ 1.21
NTM-212ENST00000474900 CEP162Q5TB80 1403 aa22.52■■□□□ 1.2
NTM-212ENST00000474900 TNIKQ9UKE5 1360 aa22.46■■□□□ 1.19
NTM-212ENST00000474900 PRDM2Q13029 1718 aa22.42■■□□□ 1.18
NTM-212ENST00000474900 EEA1Q15075 1411 aa22.39■■□□□ 1.17
NTM-212ENST00000474900 ABCC8Q09428 1581 aa22.37■■□□□ 1.17
NTM-212ENST00000474900 CFTRP13569 1480 aa22.37■■□□□ 1.17
NTM-212ENST00000474900 YTHDC1Q96MU7 727 aaKnown RBP22.3■■□□□ 1.16
NTM-212ENST00000474900 MIER1Q8N108 512 aa22.29■■□□□ 1.16
NTM-212ENST00000474900 CLSPNQ9HAW4 1339 aa22.25■■□□□ 1.15
NTM-212ENST00000474900 TTBK1Q5TCY1 1321 aaPredicted RBP22.25■■□□□ 1.15
NTM-212ENST00000474900 SOGA1O94964 1423 aa22.24■■□□□ 1.15
NTM-212ENST00000474900 CADPSQ9ULU8 1353 aa22.22■■□□□ 1.15
NTM-212ENST00000474900 GOLGA3Q08378 1498 aa22.22■■□□□ 1.15
NTM-212ENST00000474900 SYNJ1O43426 1573 aa22.2■■□□□ 1.14
NTM-212ENST00000474900 BIVM-ERCC5R4GMW8 1640 aa22.19■■□□□ 1.14
NTM-212ENST00000474900 CSRNP3Q8WYN3 585 aa22.18■■□□□ 1.14
NTM-212ENST00000474900 TOP2BQ02880 1626 aa22.17■■□□□ 1.14
NTM-212ENST00000474900 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
NTM-212ENST00000474900 UBTFP17480 764 aaKnown RBP22.1■■□□□ 1.13
NTM-212ENST00000474900 RUSC2Q8N2Y8 1516 aa22.08■■□□□ 1.12
NTM-212ENST00000474900 KIF21BO75037 1637 aa22.06■■□□□ 1.12
NTM-212ENST00000474900 CUX1P39880 1505 aa22.03■■□□□ 1.12
NTM-212ENST00000474900 CEP164Q9UPV0 1460 aa22.02■■□□□ 1.12
NTM-212ENST00000474900 HNRNPUL2Q1KMD3 747 aaKnown RBP22■■□□□ 1.11
NTM-212ENST00000474900 VPS8Q8N3P4 1428 aa21.98■■□□□ 1.11
NTM-212ENST00000474900 FANCD2Q9BXW9 1451 aa21.98■■□□□ 1.11
NTM-212ENST00000474900 SUPT16HQ9Y5B9 1047 aaKnown RBP21.96■■□□□ 1.11
NTM-212ENST00000474900 CLIP1P30622 1438 aa21.94■■□□□ 1.1
NTM-212ENST00000474900 NESP48681 1621 aa21.94■■□□□ 1.1
NTM-212ENST00000474900 DNMBPQ6XZF7 1577 aa21.88■■□□□ 1.09
NTM-212ENST00000474900 DNAJC5BQ9UF47 199 aa21.86■■□□□ 1.09
NTM-212ENST00000474900 PDS5BQ9NTI5 1447 aa21.86■■□□□ 1.09
NTM-212ENST00000474900 APLP2Q06481 763 aa21.81■■□□□ 1.08
NTM-212ENST00000474900 KIF21AQ7Z4S6 1674 aa21.8■■□□□ 1.08
NTM-212ENST00000474900 DHX57Q6P158 1386 aaKnown RBP21.8■■□□□ 1.08
NTM-212ENST00000474900 ANP32EQ9BTT0 268 aa21.79■■□□□ 1.08
NTM-212ENST00000474900 TSHZ2Q9NRE2 1034 aa21.79■■□□□ 1.08
NTM-212ENST00000474900 TOPBP1Q92547 1522 aa21.77■■□□□ 1.08
NTM-212ENST00000474900 FGD5Q6ZNL6 1462 aa21.75■■□□□ 1.07
NTM-212ENST00000474900 URB2Q14146 1524 aaKnown RBP21.71■■□□□ 1.07
NTM-212ENST00000474900 KIF27Q86VH2 1401 aa21.7■■□□□ 1.06
NTM-212ENST00000474900 RAPGEF2Q9Y4G8 1499 aa21.69■■□□□ 1.06
NTM-212ENST00000474900 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
NTM-212ENST00000474900 CUX2O14529 1486 aa21.65■■□□□ 1.06
NTM-212ENST00000474900 ERICH3Q5RHP9 1530 aa21.65■■□□□ 1.06
NTM-212ENST00000474900 WDR97A6NE52 1622 aa21.65■■□□□ 1.06
NTM-212ENST00000474900 ABCA10Q8WWZ4 1543 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms