RNA–Protein interactions for RNA: ENST00000473909.5

NMD3-207, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 2

Gene NMD3, Length 600 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-207ENST00000473909 AEBP2Q6ZN18 517 aaPredicted RBP18.58■□□□□ 0.56
NMD3-207ENST00000473909 CHIC1Q5VXU3 224 aa17.87■□□□□ 0.45
NMD3-207ENST00000473909 NISCHQ9Y2I1 1504 aa16.93■□□□□ 0.3
NMD3-207ENST00000473909 PHF23Q9BUL5 403 aaPredicted RBP15.76■□□□□ 0.11
NMD3-207ENST00000473909 SENP3Q9H4L4 574 aaPredicted RBP15.67■□□□□ 0.1
NMD3-207ENST00000473909 FOXD1Q16676 465 aa14.66□□□□□ -0.06
NMD3-207ENST00000473909 CCDC180Q9P1Z9 1646 aa14.63□□□□□ -0.07
NMD3-207ENST00000473909 PLPPR3Q6T4P5 718 aa14.38□□□□□ -0.11
NMD3-207ENST00000473909 ZCCHC6Q5VYS8 1495 aaKnown RBP14.23□□□□□ -0.13
NMD3-207ENST00000473909 SHROOM4Q9ULL8 1493 aa14.02□□□□□ -0.16
NMD3-207ENST00000473909 DCAF8L2P0C7V8 631 aa14.02□□□□□ -0.17
NMD3-207ENST00000473909 PPP6R1Q9UPN7 881 aa13.99□□□□□ -0.17
NMD3-207ENST00000473909 ADRA2BP18089 450 aa13.94□□□□□ -0.18
NMD3-207ENST00000473909 DCAF1Q9Y4B6 1507 aa13.91□□□□□ -0.18
NMD3-207ENST00000473909 ABCC9O60706 1549 aa13.89□□□□□ -0.19
NMD3-207ENST00000473909 PIAS4Q8N2W9 510 aaPredicted RBP13.73□□□□□ -0.21
NMD3-207ENST00000473909 MYO15BQ96JP2 1530 aa13.67□□□□□ -0.22
NMD3-207ENST00000473909 NACADO15069 1562 aa13.61□□□□□ -0.23
NMD3-207ENST00000473909 SCRIBQ14160 1630 aa13.6□□□□□ -0.23
NMD3-207ENST00000473909 SUPT5HO00267 1087 aaKnown RBP13.49□□□□□ -0.25
NMD3-207ENST00000473909 MSH5O43196 834 aa13.49□□□□□ -0.25
NMD3-207ENST00000473909 RB1CC1Q8TDY2 1594 aa13.48□□□□□ -0.25
NMD3-207ENST00000473909 UNC13AQ9UPW8 1703 aa13.33□□□□□ -0.28
NMD3-207ENST00000473909 CECR2Q9BXF3 1484 aa13.25□□□□□ -0.29
NMD3-207ENST00000473909 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
NMD3-207ENST00000473909 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
NMD3-207ENST00000473909 PABPN1Q86U42 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
NMD3-207ENST00000473909 MROH2BQ7Z745 1585 aa13.15□□□□□ -0.3
NMD3-207ENST00000473909 POTEDQ86YR6 584 aa13.07□□□□□ -0.32
NMD3-207ENST00000473909 WIZO95785 1651 aa13.05□□□□□ -0.32
NMD3-207ENST00000473909 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
NMD3-207ENST00000473909 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
NMD3-207ENST00000473909 TOP2AP11388 1531 aaKnown RBP12.84□□□□□ -0.35
NMD3-207ENST00000473909 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.36
NMD3-207ENST00000473909 CCDC88BA6NC98 1476 aa12.77□□□□□ -0.37
NMD3-207ENST00000473909 ATAD2BQ9ULI0 1458 aa12.77□□□□□ -0.37
NMD3-207ENST00000473909 SMARCA2P51531 1590 aa12.77□□□□□ -0.37
NMD3-207ENST00000473909 MAPK8IP2Q13387 824 aaPredicted RBP12.74□□□□□ -0.37
NMD3-207ENST00000473909 EIF4G1Q04637 1599 aaKnown RBP12.73□□□□□ -0.37
NMD3-207ENST00000473909 PPP4R3CPQ6ZMV5 832 aa12.69□□□□□ -0.38
NMD3-207ENST00000473909 BAZ1BQ9UIG0 1483 aaKnown RBP12.65□□□□□ -0.38
NMD3-207ENST00000473909 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
NMD3-207ENST00000473909 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
NMD3-207ENST00000473909 TRIM41Q8WV44 630 aa12.59□□□□□ -0.39
NMD3-207ENST00000473909 ABCC8Q09428 1581 aa12.57□□□□□ -0.4
NMD3-207ENST00000473909 LOC105371045A0A1W2PR82 267 aa12.55□□□□□ -0.4
NMD3-207ENST00000473909 HMGXB3Q12766 1538 aa12.55□□□□□ -0.4
NMD3-207ENST00000473909 CC2D2AQ9P2K1 1620 aa12.54□□□□□ -0.4
NMD3-207ENST00000473909 DMRT2Q9Y5R5 561 aa12.51□□□□□ -0.41
NMD3-207ENST00000473909 FAM9AQ8IZU1 332 aaPredicted RBP12.49□□□□□ -0.41
NMD3-207ENST00000473909 SYNJ1O43426 1573 aa12.39□□□□□ -0.43
NMD3-207ENST00000473909 DNAJC5BQ9UF47 199 aa12.39□□□□□ -0.43
NMD3-207ENST00000473909 WRNQ14191 1432 aaPredicted RBP eCLIP12.38□□□□□ -0.43
NMD3-207ENST00000473909 EHMT2Q96KQ7 1210 aa12.37□□□□□ -0.43
NMD3-207ENST00000473909 RUSC2Q8N2Y8 1516 aa12.37□□□□□ -0.43
NMD3-207ENST00000473909 CFTRP13569 1480 aa12.36□□□□□ -0.43
NMD3-207ENST00000473909 SOGA1O94964 1423 aa12.36□□□□□ -0.43
NMD3-207ENST00000473909 CNKSR2Q8WXI2 1034 aa12.34□□□□□ -0.43
NMD3-207ENST00000473909 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
NMD3-207ENST00000473909 CUX1P39880 1505 aa12.28□□□□□ -0.44
NMD3-207ENST00000473909 NESP48681 1621 aa12.27□□□□□ -0.44
NMD3-207ENST00000473909 TOP2BQ02880 1626 aa12.26□□□□□ -0.45
NMD3-207ENST00000473909 PRDM2Q13029 1718 aa12.26□□□□□ -0.45
NMD3-207ENST00000473909 BIVM-ERCC5R4GMW8 1640 aa12.26□□□□□ -0.45
NMD3-207ENST00000473909 KCNA4P22459 653 aa12.21□□□□□ -0.45
NMD3-207ENST00000473909 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.45
NMD3-207ENST00000473909 CSRNP3Q8WYN3 585 aa12.21□□□□□ -0.45
NMD3-207ENST00000473909 FANCD2Q9BXW9 1451 aa12.18□□□□□ -0.46
NMD3-207ENST00000473909 HOXD11P31277 338 aaPredicted RBP12.17□□□□□ -0.46
NMD3-207ENST00000473909 EEA1Q15075 1411 aa12.17□□□□□ -0.46
NMD3-207ENST00000473909 RNF216Q9NWF9 866 aaPredicted RBP12.15□□□□□ -0.46
NMD3-207ENST00000473909 NPM3O75607 178 aaKnown RBP12.14□□□□□ -0.47
NMD3-207ENST00000473909 LAMC3Q9Y6N6 1575 aa12.12□□□□□ -0.47
NMD3-207ENST00000473909 FGD5Q6ZNL6 1462 aa12.09□□□□□ -0.47
NMD3-207ENST00000473909 KIF21BO75037 1637 aa12.08□□□□□ -0.48
NMD3-207ENST00000473909 GOLGA3Q08378 1498 aa12.08□□□□□ -0.48
NMD3-207ENST00000473909 TNIKQ9UKE5 1360 aa12.07□□□□□ -0.48
NMD3-207ENST00000473909 URB2Q14146 1524 aaKnown RBP12.07□□□□□ -0.48
NMD3-207ENST00000473909 RAPGEF2Q9Y4G8 1499 aa12.07□□□□□ -0.48
NMD3-207ENST00000473909 KIF21AQ7Z4S6 1674 aa12.06□□□□□ -0.48
NMD3-207ENST00000473909 TOPBP1Q92547 1522 aa12.06□□□□□ -0.48
NMD3-207ENST00000473909 DNMBPQ6XZF7 1577 aa12.06□□□□□ -0.48
NMD3-207ENST00000473909 UBTFP17480 764 aaKnown RBP12.06□□□□□ -0.48
NMD3-207ENST00000473909 CEP164Q9UPV0 1460 aa12.05□□□□□ -0.48
NMD3-207ENST00000473909 RAD54L2Q9Y4B4 1467 aa12.05□□□□□ -0.48
NMD3-207ENST00000473909 CEP162Q5TB80 1403 aa12.04□□□□□ -0.48
NMD3-207ENST00000473909 CUX2O14529 1486 aa12.03□□□□□ -0.48
NMD3-207ENST00000473909 KIF27Q86VH2 1401 aa12.03□□□□□ -0.48
NMD3-207ENST00000473909 PRXQ9BXM0 1461 aa12.02□□□□□ -0.48
NMD3-207ENST00000473909 PDS5BQ9NTI5 1447 aa12.02□□□□□ -0.49
NMD3-207ENST00000473909 POLA1P09884 1462 aaPredicted RBP12.02□□□□□ -0.49
NMD3-207ENST00000473909 PCGF6Q9BYE7 350 aa12.01□□□□□ -0.49
NMD3-207ENST00000473909 PPARGC1BQ86YN6 1023 aaKnown RBP12□□□□□ -0.49
NMD3-207ENST00000473909 IGF1RP08069 1367 aa11.99□□□□□ -0.49
NMD3-207ENST00000473909 DCAF8L1A6NGE4 600 aa11.98□□□□□ -0.49
NMD3-207ENST00000473909 ERICH3Q5RHP9 1530 aa11.96□□□□□ -0.5
NMD3-207ENST00000473909 ABCA10Q8WWZ4 1543 aa11.96□□□□□ -0.5
NMD3-207ENST00000473909 WDR97A6NE52 1622 aa11.93□□□□□ -0.5
NMD3-207ENST00000473909 RANGAP1P46060 587 aaPredicted RBP11.93□□□□□ -0.5
NMD3-207ENST00000473909 CLIP1P30622 1438 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 180.9 ms