RNA–Protein interactions for RNA: ENST00000473381.1

UBASH3A-204, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 2

Gene UBASH3A, Length 2,754 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-204ENST00000473381 NISCHQ9Y2I1 1504 aa27.56■■■□□ 2
UBASH3A-204ENST00000473381 CCDC180Q9P1Z9 1646 aa23.49■■□□□ 1.35
UBASH3A-204ENST00000473381 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
UBASH3A-204ENST00000473381 ZCCHC6Q5VYS8 1495 aaKnown RBP23.31■■□□□ 1.32
UBASH3A-204ENST00000473381 SUPT5HO00267 1087 aaKnown RBP22.89■■□□□ 1.25
UBASH3A-204ENST00000473381 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
UBASH3A-204ENST00000473381 DCAF1Q9Y4B6 1507 aa22.64■■□□□ 1.22
UBASH3A-204ENST00000473381 CHIC1Q5VXU3 224 aa22.25■■□□□ 1.15
UBASH3A-204ENST00000473381 MYO15BQ96JP2 1530 aa22.14■■□□□ 1.13
UBASH3A-204ENST00000473381 ABCC9O60706 1549 aa21.97■■□□□ 1.11
UBASH3A-204ENST00000473381 SCRIBQ14160 1630 aa21.97■■□□□ 1.11
UBASH3A-204ENST00000473381 RSF1Q96T23 1441 aaPredicted RBP21.77■■□□□ 1.08
UBASH3A-204ENST00000473381 NACADO15069 1562 aa21.73■■□□□ 1.07
UBASH3A-204ENST00000473381 LOC105371045A0A1W2PR82 267 aa21.56■■□□□ 1.04
UBASH3A-204ENST00000473381 RB1CC1Q8TDY2 1594 aa21.53■■□□□ 1.04
UBASH3A-204ENST00000473381 CECR2Q9BXF3 1484 aa21.49■■□□□ 1.03
UBASH3A-204ENST00000473381 PCGF6Q9BYE7 350 aa21.44■■□□□ 1.02
UBASH3A-204ENST00000473381 HRCP23327 699 aa21.42■■□□□ 1.02
UBASH3A-204ENST00000473381 MROH2BQ7Z745 1585 aa21.41■■□□□ 1.02
UBASH3A-204ENST00000473381 TRIM41Q8WV44 630 aa21.35■■□□□ 1.01
UBASH3A-204ENST00000473381 WIZO95785 1651 aa21.29■■□□□ 1
UBASH3A-204ENST00000473381 BAZ1AQ9NRL2 1556 aaPredicted RBP21.18■□□□□ 0.98
UBASH3A-204ENST00000473381 FAM9AQ8IZU1 332 aaPredicted RBP21.14■□□□□ 0.98
UBASH3A-204ENST00000473381 TRIM26Q12899 539 aaPredicted RBP21.09■□□□□ 0.97
UBASH3A-204ENST00000473381 UNC13AQ9UPW8 1703 aa21.03■□□□□ 0.96
UBASH3A-204ENST00000473381 SMARCA4P51532 1647 aa21.01■□□□□ 0.95
UBASH3A-204ENST00000473381 EIF4G1Q04637 1599 aaKnown RBP20.99■□□□□ 0.95
UBASH3A-204ENST00000473381 TOP2AP11388 1531 aaKnown RBP20.98■□□□□ 0.95
UBASH3A-204ENST00000473381 PPARGC1BQ86YN6 1023 aaKnown RBP20.95■□□□□ 0.94
UBASH3A-204ENST00000473381 EHMT2Q96KQ7 1210 aa20.94■□□□□ 0.94
UBASH3A-204ENST00000473381 CCDC88BA6NC98 1476 aa20.87■□□□□ 0.93
UBASH3A-204ENST00000473381 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
UBASH3A-204ENST00000473381 BICRAQ9NZM4 1560 aa20.8■□□□□ 0.92
UBASH3A-204ENST00000473381 PABPN1Q86U42 306 aaKnown RBP eCLIP20.8■□□□□ 0.92
UBASH3A-204ENST00000473381 ABCC8Q09428 1581 aa20.77■□□□□ 0.92
UBASH3A-204ENST00000473381 PEG3Q9GZU2 1588 aa20.62■□□□□ 0.89
UBASH3A-204ENST00000473381 ZEB1P37275 1124 aaPredicted RBP20.61■□□□□ 0.89
UBASH3A-204ENST00000473381 SOGA1O94964 1423 aa20.57■□□□□ 0.88
UBASH3A-204ENST00000473381 EEA1Q15075 1411 aa20.49■□□□□ 0.87
UBASH3A-204ENST00000473381 ATAD2BQ9ULI0 1458 aa20.49■□□□□ 0.87
UBASH3A-204ENST00000473381 RUSC2Q8N2Y8 1516 aa20.47■□□□□ 0.87
UBASH3A-204ENST00000473381 WRNQ14191 1432 aaPredicted RBP eCLIP20.45■□□□□ 0.86
UBASH3A-204ENST00000473381 CSRNP3Q8WYN3 585 aa20.45■□□□□ 0.86
UBASH3A-204ENST00000473381 CEP162Q5TB80 1403 aa20.45■□□□□ 0.86
UBASH3A-204ENST00000473381 TNIKQ9UKE5 1360 aa20.44■□□□□ 0.86
UBASH3A-204ENST00000473381 BAZ1BQ9UIG0 1483 aaKnown RBP20.42■□□□□ 0.86
UBASH3A-204ENST00000473381 SYNJ1O43426 1573 aa20.36■□□□□ 0.85
UBASH3A-204ENST00000473381 UBTFP17480 764 aaKnown RBP20.34■□□□□ 0.85
UBASH3A-204ENST00000473381 GOLGA3Q08378 1498 aa20.33■□□□□ 0.85
UBASH3A-204ENST00000473381 TTBK1Q5TCY1 1321 aaPredicted RBP20.25■□□□□ 0.83
UBASH3A-204ENST00000473381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.24■□□□□ 0.83
UBASH3A-204ENST00000473381 CEP164Q9UPV0 1460 aa20.23■□□□□ 0.83
UBASH3A-204ENST00000473381 KIF21BO75037 1637 aa20.21■□□□□ 0.83
UBASH3A-204ENST00000473381 CCER1Q8TC90 406 aaPredicted RBP20.19■□□□□ 0.82
UBASH3A-204ENST00000473381 TOP2BQ02880 1626 aa20.12■□□□□ 0.81
UBASH3A-204ENST00000473381 NCAPD3P42695 1498 aa20.11■□□□□ 0.81
UBASH3A-204ENST00000473381 HMGXB3Q12766 1538 aa20.11■□□□□ 0.81
UBASH3A-204ENST00000473381 CLIP1P30622 1438 aa20.09■□□□□ 0.81
UBASH3A-204ENST00000473381 RAPGEF2Q9Y4G8 1499 aa20.08■□□□□ 0.8
UBASH3A-204ENST00000473381 BIVM-ERCC5R4GMW8 1640 aa20.06■□□□□ 0.8
UBASH3A-204ENST00000473381 VPS8Q8N3P4 1428 aa20■□□□□ 0.79
UBASH3A-204ENST00000473381 CUX1P39880 1505 aa19.94■□□□□ 0.78
UBASH3A-204ENST00000473381 RANGAP1P46060 587 aaPredicted RBP19.93■□□□□ 0.78
UBASH3A-204ENST00000473381 CFTRP13569 1480 aa19.92■□□□□ 0.78
UBASH3A-204ENST00000473381 PRXQ9BXM0 1461 aa19.91■□□□□ 0.78
UBASH3A-204ENST00000473381 ERICH3Q5RHP9 1530 aa19.91■□□□□ 0.78
UBASH3A-204ENST00000473381 APLP2Q06481 763 aa19.88■□□□□ 0.77
UBASH3A-204ENST00000473381 HNRNPUL2Q1KMD3 747 aaKnown RBP19.84■□□□□ 0.77
UBASH3A-204ENST00000473381 KIF27Q86VH2 1401 aa19.84■□□□□ 0.77
UBASH3A-204ENST00000473381 ARAP1Q96P48 1450 aa19.78■□□□□ 0.76
UBASH3A-204ENST00000473381 PRDM2Q13029 1718 aa19.75■□□□□ 0.75
UBASH3A-204ENST00000473381 DIEXFQ68CQ4 756 aaKnown RBP19.75■□□□□ 0.75
UBASH3A-204ENST00000473381 CADPSQ9ULU8 1353 aa19.71■□□□□ 0.75
UBASH3A-204ENST00000473381 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
UBASH3A-204ENST00000473381 CUX2O14529 1486 aa19.66■□□□□ 0.74
UBASH3A-204ENST00000473381 ZNF316A6NFI3 1004 aaPredicted RBP19.64■□□□□ 0.73
UBASH3A-204ENST00000473381 KANK4Q5T7N3 995 aaPredicted RBP19.64■□□□□ 0.73
UBASH3A-204ENST00000473381 IGF1RP08069 1367 aa19.62■□□□□ 0.73
UBASH3A-204ENST00000473381 CC2D2AQ9P2K1 1620 aa19.62■□□□□ 0.73
UBASH3A-204ENST00000473381 ARHGAP35Q9NRY4 1499 aa19.62■□□□□ 0.73
UBASH3A-204ENST00000473381 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
UBASH3A-204ENST00000473381 CARMIL1Q5VZK9 1371 aa19.54■□□□□ 0.72
UBASH3A-204ENST00000473381 ACIN1Q9UKV3 1341 aaKnown RBP19.53■□□□□ 0.72
UBASH3A-204ENST00000473381 FANCD2Q9BXW9 1451 aa19.52■□□□□ 0.72
UBASH3A-204ENST00000473381 RRBP1Q9P2E9 1410 aaKnown RBP19.52■□□□□ 0.72
UBASH3A-204ENST00000473381 NEUROD1Q13562 356 aa19.49■□□□□ 0.71
UBASH3A-204ENST00000473381 DHX57Q6P158 1386 aaKnown RBP19.47■□□□□ 0.71
UBASH3A-204ENST00000473381 CLSPNQ9HAW4 1339 aa19.44■□□□□ 0.7
UBASH3A-204ENST00000473381 CENPBP07199 599 aaPredicted RBP19.44■□□□□ 0.7
UBASH3A-204ENST00000473381 CCNB3Q8WWL7 1395 aa19.44■□□□□ 0.7
UBASH3A-204ENST00000473381 DNMBPQ6XZF7 1577 aa19.43■□□□□ 0.7
UBASH3A-204ENST00000473381 RAD54L2Q9Y4B4 1467 aa19.4■□□□□ 0.7
UBASH3A-204ENST00000473381 TIAM1Q13009 1591 aa19.4■□□□□ 0.7
UBASH3A-204ENST00000473381 MAP3K1Q13233 1512 aa19.39■□□□□ 0.69
UBASH3A-204ENST00000473381 TOPBP1Q92547 1522 aa19.39■□□□□ 0.69
UBASH3A-204ENST00000473381 NESP48681 1621 aa19.39■□□□□ 0.69
UBASH3A-204ENST00000473381 ABCA10Q8WWZ4 1543 aa19.38■□□□□ 0.69
UBASH3A-204ENST00000473381 POLA1P09884 1462 aaPredicted RBP19.37■□□□□ 0.69
UBASH3A-204ENST00000473381 ITGAEP38570 1179 aa19.33■□□□□ 0.69
UBASH3A-204ENST00000473381 MIER1Q8N108 512 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 290.5 ms