RNA–Protein interactions for RNA: ENST00000473259.1

UBFD1P1-201, Transcript of ubiquitin family domain containing 1 pseudogene 1, humanhuman

BASIC

Gene UBFD1P1, Length 814 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1P1-201ENST00000473259 AEBP2Q6ZN18 517 aaPredicted RBP18.46■□□□□ 0.55
UBFD1P1-201ENST00000473259 CHIC1Q5VXU3 224 aa17.85■□□□□ 0.45
UBFD1P1-201ENST00000473259 SENP3Q9H4L4 574 aaPredicted RBP15.77■□□□□ 0.12
UBFD1P1-201ENST00000473259 PHF23Q9BUL5 403 aaPredicted RBP15.65■□□□□ 0.1
UBFD1P1-201ENST00000473259 NISCHQ9Y2I1 1504 aa14.97□□□□□ -0.01
UBFD1P1-201ENST00000473259 FOXD1Q16676 465 aa14.63□□□□□ -0.07
UBFD1P1-201ENST00000473259 PLPPR3Q6T4P5 718 aa14.43□□□□□ -0.1
UBFD1P1-201ENST00000473259 PPP6R1Q9UPN7 881 aa13.89□□□□□ -0.19
UBFD1P1-201ENST00000473259 ADRA2BP18089 450 aa13.88□□□□□ -0.19
UBFD1P1-201ENST00000473259 PIAS4Q8N2W9 510 aaPredicted RBP13.75□□□□□ -0.21
UBFD1P1-201ENST00000473259 MSH5O43196 834 aa13.62□□□□□ -0.23
UBFD1P1-201ENST00000473259 ABCC9O60706 1549 aa13.56□□□□□ -0.24
UBFD1P1-201ENST00000473259 CCDC180Q9P1Z9 1646 aa13.4□□□□□ -0.26
UBFD1P1-201ENST00000473259 DNAJC5BQ9UF47 199 aa12.83□□□□□ -0.36
UBFD1P1-201ENST00000473259 SCAF1Q9H7N4 1312 aaKnown RBP12.79□□□□□ -0.36
UBFD1P1-201ENST00000473259 RB1CC1Q8TDY2 1594 aa12.76□□□□□ -0.37
UBFD1P1-201ENST00000473259 POTEDQ86YR6 584 aa12.75□□□□□ -0.37
UBFD1P1-201ENST00000473259 UNC13AQ9UPW8 1703 aa12.68□□□□□ -0.38
UBFD1P1-201ENST00000473259 PPP4R3CPQ6ZMV5 832 aa12.68□□□□□ -0.38
UBFD1P1-201ENST00000473259 DCAF8L2P0C7V8 631 aa12.66□□□□□ -0.38
UBFD1P1-201ENST00000473259 MAPK8IP2Q13387 824 aaPredicted RBP12.66□□□□□ -0.38
UBFD1P1-201ENST00000473259 NACADO15069 1562 aa12.64□□□□□ -0.39
UBFD1P1-201ENST00000473259 PABPN1Q86U42 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
UBFD1P1-201ENST00000473259 BICRAQ9NZM4 1560 aa12.54□□□□□ -0.4
UBFD1P1-201ENST00000473259 DMRT2Q9Y5R5 561 aa12.53□□□□□ -0.4
UBFD1P1-201ENST00000473259 ZCCHC6Q5VYS8 1495 aaKnown RBP12.4□□□□□ -0.42
UBFD1P1-201ENST00000473259 CNKSR2Q8WXI2 1034 aa12.39□□□□□ -0.43
UBFD1P1-201ENST00000473259 MYO15BQ96JP2 1530 aa12.38□□□□□ -0.43
UBFD1P1-201ENST00000473259 SCRIBQ14160 1630 aa12.35□□□□□ -0.43
UBFD1P1-201ENST00000473259 NCBP3Q53F19 620 aaKnown RBP12.33□□□□□ -0.44
UBFD1P1-201ENST00000473259 DCAF1Q9Y4B6 1507 aa12.26□□□□□ -0.45
UBFD1P1-201ENST00000473259 CC2D2AQ9P2K1 1620 aa12.23□□□□□ -0.45
UBFD1P1-201ENST00000473259 RNF216Q9NWF9 866 aaPredicted RBP12.19□□□□□ -0.46
UBFD1P1-201ENST00000473259 HOXD11P31277 338 aaPredicted RBP12.18□□□□□ -0.46
UBFD1P1-201ENST00000473259 EIF4G1Q04637 1599 aaKnown RBP12.16□□□□□ -0.46
UBFD1P1-201ENST00000473259 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
UBFD1P1-201ENST00000473259 KCNA4P22459 653 aa12.1□□□□□ -0.47
UBFD1P1-201ENST00000473259 SHROOM4Q9ULL8 1493 aa12.08□□□□□ -0.47
UBFD1P1-201ENST00000473259 NPM3O75607 178 aaKnown RBP12.08□□□□□ -0.48
UBFD1P1-201ENST00000473259 DCAF8L1A6NGE4 600 aa12.05□□□□□ -0.48
UBFD1P1-201ENST00000473259 SMARCA4P51532 1647 aa11.71□□□□□ -0.53
UBFD1P1-201ENST00000473259 ATAD2BQ9ULI0 1458 aa11.7□□□□□ -0.54
UBFD1P1-201ENST00000473259 NESP48681 1621 aa11.69□□□□□ -0.54
UBFD1P1-201ENST00000473259 NCAPD3P42695 1498 aa11.68□□□□□ -0.54
UBFD1P1-201ENST00000473259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.66□□□□□ -0.54
UBFD1P1-201ENST00000473259 DNAJC5Q9H3Z4 198 aa11.62□□□□□ -0.55
UBFD1P1-201ENST00000473259 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
UBFD1P1-201ENST00000473259 RNF39Q9H2S5 420 aa11.61□□□□□ -0.55
UBFD1P1-201ENST00000473259 HMGXB3Q12766 1538 aa11.6□□□□□ -0.55
UBFD1P1-201ENST00000473259 ERCC6Q03468 1493 aa11.59□□□□□ -0.55
UBFD1P1-201ENST00000473259 SMARCA2P51531 1590 aa11.58□□□□□ -0.55
UBFD1P1-201ENST00000473259 BAZ1AQ9NRL2 1556 aaPredicted RBP11.56□□□□□ -0.56
UBFD1P1-201ENST00000473259 BAZ1BQ9UIG0 1483 aaKnown RBP11.56□□□□□ -0.56
UBFD1P1-201ENST00000473259 CUX2O14529 1486 aa11.54□□□□□ -0.56
UBFD1P1-201ENST00000473259 KIF21AQ7Z4S6 1674 aa11.54□□□□□ -0.56
UBFD1P1-201ENST00000473259 THOC2Q8NI27 1593 aaKnown RBP11.54□□□□□ -0.56
UBFD1P1-201ENST00000473259 PEG3Q9GZU2 1588 aa11.53□□□□□ -0.56
UBFD1P1-201ENST00000473259 CACNB1Q02641 598 aaPredicted RBP11.52□□□□□ -0.57
UBFD1P1-201ENST00000473259 SLC4A1APQ9BWU0 796 aaKnown RBP11.52□□□□□ -0.57
UBFD1P1-201ENST00000473259 WIZO95785 1651 aa11.51□□□□□ -0.57
UBFD1P1-201ENST00000473259 C1QBPQ07021 282 aaKnown RBP11.5□□□□□ -0.57
UBFD1P1-201ENST00000473259 SLC4A2P04920 1241 aa11.44□□□□□ -0.58
UBFD1P1-201ENST00000473259 LAMC3Q9Y6N6 1575 aa11.42□□□□□ -0.58
UBFD1P1-201ENST00000473259 U3KPZ7 1027 aaPredicted RBP11.38□□□□□ -0.59
UBFD1P1-201ENST00000473259 CADPSQ9ULU8 1353 aa11.33□□□□□ -0.6
UBFD1P1-201ENST00000473259 RSF1Q96T23 1441 aaPredicted RBP11.3□□□□□ -0.6
UBFD1P1-201ENST00000473259 PDS5BQ9NTI5 1447 aa11.3□□□□□ -0.6
UBFD1P1-201ENST00000473259 MRC2Q9UBG0 1479 aa11.3□□□□□ -0.6
UBFD1P1-201ENST00000473259 WDR62O43379 1518 aa11.29□□□□□ -0.6
UBFD1P1-201ENST00000473259 FANCD2Q9BXW9 1451 aa11.25□□□□□ -0.61
UBFD1P1-201ENST00000473259 TOP2AP11388 1531 aaKnown RBP11.25□□□□□ -0.61
UBFD1P1-201ENST00000473259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.24□□□□□ -0.61
UBFD1P1-201ENST00000473259 HNRNPUL2Q1KMD3 747 aaKnown RBP11.24□□□□□ -0.61
UBFD1P1-201ENST00000473259 CEP164Q9UPV0 1460 aa11.23□□□□□ -0.61
UBFD1P1-201ENST00000473259 URB2Q14146 1524 aaKnown RBP11.23□□□□□ -0.61
UBFD1P1-201ENST00000473259 FOXD4L1Q9NU39 408 aa11.22□□□□□ -0.61
UBFD1P1-201ENST00000473259 CFTRP13569 1480 aa11.21□□□□□ -0.61
UBFD1P1-201ENST00000473259 APLP2Q06481 763 aa11.2□□□□□ -0.62
UBFD1P1-201ENST00000473259 MYCNP04198 464 aaPredicted RBP11.19□□□□□ -0.62
UBFD1P1-201ENST00000473259 TRIM41Q8WV44 630 aa11.19□□□□□ -0.62
UBFD1P1-201ENST00000473259 SAMD1Q6SPF0 538 aaPredicted RBP11.17□□□□□ -0.62
UBFD1P1-201ENST00000473259 PRDM2Q13029 1718 aa11.17□□□□□ -0.62
UBFD1P1-201ENST00000473259 CCDC88BA6NC98 1476 aa11.16□□□□□ -0.62
UBFD1P1-201ENST00000473259 CAPN15O75808 1086 aa11.15□□□□□ -0.62
UBFD1P1-201ENST00000473259 SPINK5Q9NQ38 1064 aaPredicted RBP11.13□□□□□ -0.63
UBFD1P1-201ENST00000473259 ZNF608Q9ULD9 1512 aaPredicted RBP11.12□□□□□ -0.63
UBFD1P1-201ENST00000473259 ZBTB22O15209 634 aa11.09□□□□□ -0.63
UBFD1P1-201ENST00000473259 TOPBP1Q92547 1522 aa11.05□□□□□ -0.64
UBFD1P1-201ENST00000473259 TRHP20396 242 aaPredicted RBP11.04□□□□□ -0.64
UBFD1P1-201ENST00000473259 ZNF219Q9P2Y4 722 aaPredicted RBP11.03□□□□□ -0.64
UBFD1P1-201ENST00000473259 EIF4G3O43432 1585 aaKnown RBP11.03□□□□□ -0.64
UBFD1P1-201ENST00000473259 RIMBP3CA6NJZ7 1639 aa11.02□□□□□ -0.64
UBFD1P1-201ENST00000473259 RIMBP3BA6NNM3 1639 aa11.02□□□□□ -0.64
UBFD1P1-201ENST00000473259 RIMBP3Q9UFD9 1639 aa11.02□□□□□ -0.64
UBFD1P1-201ENST00000473259 CHD1O14646 1710 aa11□□□□□ -0.65
UBFD1P1-201ENST00000473259 TARBP1Q13395 1621 aaKnown RBP10.99□□□□□ -0.65
UBFD1P1-201ENST00000473259 OSCARQ8IYS5 282 aa10.99□□□□□ -0.65
UBFD1P1-201ENST00000473259 DNMBPQ6XZF7 1577 aa10.99□□□□□ -0.65
UBFD1P1-201ENST00000473259 DSG3P32926 999 aa10.98□□□□□ -0.65
UBFD1P1-201ENST00000473259 AQRO60306 1485 aaKnown RBP eCLIP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 652.9 ms