RNA–Protein interactions for RNA: ENST00000472899.5

SYNPR-208, Transcript of synaptoporin, humanhuman

TSL 4 BASIC

Gene SYNPR, Length 527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPR-208ENST00000472899 AEBP2Q6ZN18 517 aaPredicted RBP18.9■□□□□ 0.62
SYNPR-208ENST00000472899 CHIC1Q5VXU3 224 aa17.9■□□□□ 0.46
SYNPR-208ENST00000472899 NISCHQ9Y2I1 1504 aa17.06■□□□□ 0.32
SYNPR-208ENST00000472899 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
SYNPR-208ENST00000472899 PHF23Q9BUL5 403 aaPredicted RBP15.83■□□□□ 0.12
SYNPR-208ENST00000472899 FOXD1Q16676 465 aa14.94□□□□□ -0.02
SYNPR-208ENST00000472899 CCDC180Q9P1Z9 1646 aa14.89□□□□□ -0.03
SYNPR-208ENST00000472899 ZCCHC6Q5VYS8 1495 aaKnown RBP14.36□□□□□ -0.11
SYNPR-208ENST00000472899 PLPPR3Q6T4P5 718 aa14.25□□□□□ -0.13
SYNPR-208ENST00000472899 DCAF1Q9Y4B6 1507 aa14.19□□□□□ -0.14
SYNPR-208ENST00000472899 PPP6R1Q9UPN7 881 aa14.11□□□□□ -0.15
SYNPR-208ENST00000472899 DCAF8L2P0C7V8 631 aa14.06□□□□□ -0.16
SYNPR-208ENST00000472899 MYO15BQ96JP2 1530 aa14.03□□□□□ -0.16
SYNPR-208ENST00000472899 ADRA2BP18089 450 aa14□□□□□ -0.17
SYNPR-208ENST00000472899 ABCC9O60706 1549 aa13.97□□□□□ -0.17
SYNPR-208ENST00000472899 NACADO15069 1562 aa13.9□□□□□ -0.18
SYNPR-208ENST00000472899 PIAS4Q8N2W9 510 aaPredicted RBP13.88□□□□□ -0.19
SYNPR-208ENST00000472899 SHROOM4Q9ULL8 1493 aa13.87□□□□□ -0.19
SYNPR-208ENST00000472899 MSH5O43196 834 aa13.78□□□□□ -0.2
SYNPR-208ENST00000472899 RB1CC1Q8TDY2 1594 aa13.77□□□□□ -0.21
SYNPR-208ENST00000472899 SCRIBQ14160 1630 aa13.63□□□□□ -0.23
SYNPR-208ENST00000472899 POTEDQ86YR6 584 aa13.45□□□□□ -0.26
SYNPR-208ENST00000472899 SUPT5HO00267 1087 aaKnown RBP13.41□□□□□ -0.26
SYNPR-208ENST00000472899 UNC13AQ9UPW8 1703 aa13.24□□□□□ -0.29
SYNPR-208ENST00000472899 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
SYNPR-208ENST00000472899 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
SYNPR-208ENST00000472899 BICRAQ9NZM4 1560 aa13.18□□□□□ -0.3
SYNPR-208ENST00000472899 PABPN1Q86U42 306 aaKnown RBP eCLIP13.15□□□□□ -0.3
SYNPR-208ENST00000472899 CECR2Q9BXF3 1484 aa13.15□□□□□ -0.3
SYNPR-208ENST00000472899 MROH2BQ7Z745 1585 aa13.11□□□□□ -0.31
SYNPR-208ENST00000472899 SMARCA4P51532 1647 aa13.09□□□□□ -0.31
SYNPR-208ENST00000472899 TOP2AP11388 1531 aaKnown RBP12.98□□□□□ -0.33
SYNPR-208ENST00000472899 WIZO95785 1651 aa12.96□□□□□ -0.33
SYNPR-208ENST00000472899 SMARCA2P51531 1590 aa12.96□□□□□ -0.33
SYNPR-208ENST00000472899 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.33
SYNPR-208ENST00000472899 ATAD2BQ9ULI0 1458 aa12.89□□□□□ -0.35
SYNPR-208ENST00000472899 EIF4G1Q04637 1599 aaKnown RBP12.87□□□□□ -0.35
SYNPR-208ENST00000472899 BAZ1BQ9UIG0 1483 aaKnown RBP12.87□□□□□ -0.35
SYNPR-208ENST00000472899 MAPK8IP2Q13387 824 aaPredicted RBP12.87□□□□□ -0.35
SYNPR-208ENST00000472899 HMGXB3Q12766 1538 aa12.81□□□□□ -0.36
SYNPR-208ENST00000472899 NCAPD3P42695 1498 aa12.79□□□□□ -0.36
SYNPR-208ENST00000472899 CCDC88BA6NC98 1476 aa12.78□□□□□ -0.36
SYNPR-208ENST00000472899 TRIM41Q8WV44 630 aa12.69□□□□□ -0.38
SYNPR-208ENST00000472899 DMRT2Q9Y5R5 561 aa12.68□□□□□ -0.38
SYNPR-208ENST00000472899 CC2D2AQ9P2K1 1620 aa12.64□□□□□ -0.39
SYNPR-208ENST00000472899 PPP4R3CPQ6ZMV5 832 aa12.56□□□□□ -0.4
SYNPR-208ENST00000472899 SCAF1Q9H7N4 1312 aaKnown RBP12.56□□□□□ -0.4
SYNPR-208ENST00000472899 WRNQ14191 1432 aaPredicted RBP eCLIP12.52□□□□□ -0.41
SYNPR-208ENST00000472899 CFTRP13569 1480 aa12.52□□□□□ -0.41
SYNPR-208ENST00000472899 CADPSQ9ULU8 1353 aa12.48□□□□□ -0.41
SYNPR-208ENST00000472899 EEA1Q15075 1411 aa12.47□□□□□ -0.41
SYNPR-208ENST00000472899 ABCC8Q09428 1581 aa12.46□□□□□ -0.42
SYNPR-208ENST00000472899 PRDM2Q13029 1718 aa12.39□□□□□ -0.43
SYNPR-208ENST00000472899 LAMC3Q9Y6N6 1575 aa12.37□□□□□ -0.43
SYNPR-208ENST00000472899 TOP2BQ02880 1626 aa12.37□□□□□ -0.43
SYNPR-208ENST00000472899 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
SYNPR-208ENST00000472899 FAM9AQ8IZU1 332 aaPredicted RBP12.35□□□□□ -0.43
SYNPR-208ENST00000472899 PDS5BQ9NTI5 1447 aa12.34□□□□□ -0.43
SYNPR-208ENST00000472899 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
SYNPR-208ENST00000472899 BIVM-ERCC5R4GMW8 1640 aa12.33□□□□□ -0.44
SYNPR-208ENST00000472899 DNAJC5BQ9UF47 199 aa12.3□□□□□ -0.44
SYNPR-208ENST00000472899 CEP164Q9UPV0 1460 aa12.28□□□□□ -0.44
SYNPR-208ENST00000472899 CUX1P39880 1505 aa12.28□□□□□ -0.44
SYNPR-208ENST00000472899 CSRNP3Q8WYN3 585 aa12.28□□□□□ -0.44
SYNPR-208ENST00000472899 HOXD11P31277 338 aaPredicted RBP12.27□□□□□ -0.45
SYNPR-208ENST00000472899 SOGA1O94964 1423 aa12.27□□□□□ -0.45
SYNPR-208ENST00000472899 LOC105371045A0A1W2PR82 267 aa12.26□□□□□ -0.45
SYNPR-208ENST00000472899 CNKSR2Q8WXI2 1034 aa12.26□□□□□ -0.45
SYNPR-208ENST00000472899 KIF27Q86VH2 1401 aa12.25□□□□□ -0.45
SYNPR-208ENST00000472899 DNMBPQ6XZF7 1577 aa12.23□□□□□ -0.45
SYNPR-208ENST00000472899 GOLGA3Q08378 1498 aa12.23□□□□□ -0.45
SYNPR-208ENST00000472899 NESP48681 1621 aa12.22□□□□□ -0.45
SYNPR-208ENST00000472899 KIF21BO75037 1637 aa12.19□□□□□ -0.46
SYNPR-208ENST00000472899 TOPBP1Q92547 1522 aa12.18□□□□□ -0.46
SYNPR-208ENST00000472899 FGD5Q6ZNL6 1462 aa12.18□□□□□ -0.46
SYNPR-208ENST00000472899 TNIKQ9UKE5 1360 aa12.18□□□□□ -0.46
SYNPR-208ENST00000472899 UBTFP17480 764 aaKnown RBP12.15□□□□□ -0.46
SYNPR-208ENST00000472899 RNF216Q9NWF9 866 aaPredicted RBP12.15□□□□□ -0.46
SYNPR-208ENST00000472899 CUX2O14529 1486 aa12.14□□□□□ -0.47
SYNPR-208ENST00000472899 RUSC2Q8N2Y8 1516 aa12.14□□□□□ -0.47
SYNPR-208ENST00000472899 ERICH3Q5RHP9 1530 aa12.13□□□□□ -0.47
SYNPR-208ENST00000472899 MRC2Q9UBG0 1479 aa12.13□□□□□ -0.47
SYNPR-208ENST00000472899 POLA1P09884 1462 aaPredicted RBP12.12□□□□□ -0.47
SYNPR-208ENST00000472899 ABCA10Q8WWZ4 1543 aa12.11□□□□□ -0.47
SYNPR-208ENST00000472899 EHMT2Q96KQ7 1210 aa12.11□□□□□ -0.47
SYNPR-208ENST00000472899 URB2Q14146 1524 aaKnown RBP12.11□□□□□ -0.47
SYNPR-208ENST00000472899 ERCC6Q03468 1493 aa12.1□□□□□ -0.47
SYNPR-208ENST00000472899 PRXQ9BXM0 1461 aa12.09□□□□□ -0.47
SYNPR-208ENST00000472899 CEP162Q5TB80 1403 aa12.09□□□□□ -0.47
SYNPR-208ENST00000472899 KIF21AQ7Z4S6 1674 aa12.06□□□□□ -0.48
SYNPR-208ENST00000472899 RAPGEF2Q9Y4G8 1499 aa12.04□□□□□ -0.48
SYNPR-208ENST00000472899 DCAF8L1A6NGE4 600 aa12.04□□□□□ -0.48
SYNPR-208ENST00000472899 IGF1RP08069 1367 aa12.03□□□□□ -0.48
SYNPR-208ENST00000472899 CARMIL1Q5VZK9 1371 aa12.03□□□□□ -0.48
SYNPR-208ENST00000472899 RAD54L2Q9Y4B4 1467 aa12.02□□□□□ -0.48
SYNPR-208ENST00000472899 WDR62O43379 1518 aa12.02□□□□□ -0.48
SYNPR-208ENST00000472899 IFT140Q96RY7 1462 aa12.02□□□□□ -0.49
SYNPR-208ENST00000472899 CLIP1P30622 1438 aa12.01□□□□□ -0.49
SYNPR-208ENST00000472899 WDR97A6NE52 1622 aa12□□□□□ -0.49
SYNPR-208ENST00000472899 CUL7Q14999 1698 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms