RNA–Protein interactions for RNA: ENST00000471275.1

KIDINS220-204, Transcript of kinase D interacting substrate 220, humanhuman

TSL 3

Gene KIDINS220, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIDINS220-204ENST00000471275 AEBP2Q6ZN18 517 aaPredicted RBP25.38■■□□□ 1.65
KIDINS220-204ENST00000471275 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
KIDINS220-204ENST00000471275 NISCHQ9Y2I1 1504 aa21.72■■□□□ 1.07
KIDINS220-204ENST00000471275 SENP3Q9H4L4 574 aaPredicted RBP21.46■■□□□ 1.03
KIDINS220-204ENST00000471275 PHF23Q9BUL5 403 aaPredicted RBP21.29■■□□□ 1
KIDINS220-204ENST00000471275 FOXD1Q16676 465 aa20.18■□□□□ 0.82
KIDINS220-204ENST00000471275 CCDC180Q9P1Z9 1646 aa19.49■□□□□ 0.71
KIDINS220-204ENST00000471275 ABCC9O60706 1549 aa19.46■□□□□ 0.71
KIDINS220-204ENST00000471275 PLPPR3Q6T4P5 718 aa18.9■□□□□ 0.62
KIDINS220-204ENST00000471275 PPP6R1Q9UPN7 881 aa18.85■□□□□ 0.61
KIDINS220-204ENST00000471275 PIAS4Q8N2W9 510 aaPredicted RBP18.78■□□□□ 0.6
KIDINS220-204ENST00000471275 ADRA2BP18089 450 aa18.77■□□□□ 0.6
KIDINS220-204ENST00000471275 MSH5O43196 834 aa18.74■□□□□ 0.59
KIDINS220-204ENST00000471275 POTEDQ86YR6 584 aa18.71■□□□□ 0.59
KIDINS220-204ENST00000471275 RB1CC1Q8TDY2 1594 aa18.58■□□□□ 0.56
KIDINS220-204ENST00000471275 NACADO15069 1562 aa18.48■□□□□ 0.55
KIDINS220-204ENST00000471275 MYO15BQ96JP2 1530 aa18.32■□□□□ 0.52
KIDINS220-204ENST00000471275 DNAJC5BQ9UF47 199 aa18.31■□□□□ 0.52
KIDINS220-204ENST00000471275 DCAF8L2P0C7V8 631 aa18.18■□□□□ 0.5
KIDINS220-204ENST00000471275 PABPN1Q86U42 306 aaKnown RBP eCLIP18.09■□□□□ 0.49
KIDINS220-204ENST00000471275 DCAF1Q9Y4B6 1507 aa18.03■□□□□ 0.48
KIDINS220-204ENST00000471275 BICRAQ9NZM4 1560 aa18.02■□□□□ 0.48
KIDINS220-204ENST00000471275 ZCCHC6Q5VYS8 1495 aaKnown RBP18.01■□□□□ 0.47
KIDINS220-204ENST00000471275 UNC13AQ9UPW8 1703 aa18■□□□□ 0.47
KIDINS220-204ENST00000471275 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
KIDINS220-204ENST00000471275 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
KIDINS220-204ENST00000471275 CC2D2AQ9P2K1 1620 aa17.59■□□□□ 0.41
KIDINS220-204ENST00000471275 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
KIDINS220-204ENST00000471275 CECR2Q9BXF3 1484 aa17.59■□□□□ 0.41
KIDINS220-204ENST00000471275 MAPK8IP2Q13387 824 aaPredicted RBP17.33■□□□□ 0.36
KIDINS220-204ENST00000471275 NCAPD3P42695 1498 aa17.1■□□□□ 0.33
KIDINS220-204ENST00000471275 DMRT2Q9Y5R5 561 aa17.04■□□□□ 0.32
KIDINS220-204ENST00000471275 ATAD2BQ9ULI0 1458 aa16.99■□□□□ 0.31
KIDINS220-204ENST00000471275 HMGXB3Q12766 1538 aa16.94■□□□□ 0.3
KIDINS220-204ENST00000471275 SMARCA2P51531 1590 aa16.94■□□□□ 0.3
KIDINS220-204ENST00000471275 DNAJC5Q9H3Z4 198 aa16.93■□□□□ 0.3
KIDINS220-204ENST00000471275 CUX2O14529 1486 aa16.92■□□□□ 0.3
KIDINS220-204ENST00000471275 SMARCA4P51532 1647 aa16.9■□□□□ 0.3
KIDINS220-204ENST00000471275 SCAF1Q9H7N4 1312 aaKnown RBP16.89■□□□□ 0.29
KIDINS220-204ENST00000471275 BAZ1AQ9NRL2 1556 aaPredicted RBP16.87■□□□□ 0.29
KIDINS220-204ENST00000471275 PEG3Q9GZU2 1588 aa16.84■□□□□ 0.29
KIDINS220-204ENST00000471275 ERCC6Q03468 1493 aa16.82■□□□□ 0.28
KIDINS220-204ENST00000471275 BAZ1BQ9UIG0 1483 aaKnown RBP16.79■□□□□ 0.28
KIDINS220-204ENST00000471275 NESP48681 1621 aa16.7■□□□□ 0.26
KIDINS220-204ENST00000471275 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
KIDINS220-204ENST00000471275 LAMC3Q9Y6N6 1575 aa16.67■□□□□ 0.26
KIDINS220-204ENST00000471275 PPP4R3CPQ6ZMV5 832 aa16.65■□□□□ 0.26
KIDINS220-204ENST00000471275 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
KIDINS220-204ENST00000471275 THOC2Q8NI27 1593 aaKnown RBP16.58■□□□□ 0.24
KIDINS220-204ENST00000471275 CADPSQ9ULU8 1353 aa16.54■□□□□ 0.24
KIDINS220-204ENST00000471275 DCAF8L1A6NGE4 600 aa16.47■□□□□ 0.23
KIDINS220-204ENST00000471275 KIF21AQ7Z4S6 1674 aa16.43■□□□□ 0.22
KIDINS220-204ENST00000471275 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
KIDINS220-204ENST00000471275 WIZO95785 1651 aa16.41■□□□□ 0.22
KIDINS220-204ENST00000471275 WDR62O43379 1518 aa16.4■□□□□ 0.22
KIDINS220-204ENST00000471275 RSF1Q96T23 1441 aaPredicted RBP16.36■□□□□ 0.21
KIDINS220-204ENST00000471275 CFTRP13569 1480 aa16.35■□□□□ 0.21
KIDINS220-204ENST00000471275 HOXD11P31277 338 aaPredicted RBP16.33■□□□□ 0.2
KIDINS220-204ENST00000471275 CEP164Q9UPV0 1460 aa16.33■□□□□ 0.2
KIDINS220-204ENST00000471275 FANCD2Q9BXW9 1451 aa16.31■□□□□ 0.2
KIDINS220-204ENST00000471275 TOP2AP11388 1531 aaKnown RBP16.3■□□□□ 0.2
KIDINS220-204ENST00000471275 CACNB1Q02641 598 aaPredicted RBP16.3■□□□□ 0.2
KIDINS220-204ENST00000471275 CNKSR2Q8WXI2 1034 aa16.28■□□□□ 0.2
KIDINS220-204ENST00000471275 URB2Q14146 1524 aaKnown RBP16.16■□□□□ 0.18
KIDINS220-204ENST00000471275 RNF216Q9NWF9 866 aaPredicted RBP16.15■□□□□ 0.18
KIDINS220-204ENST00000471275 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
KIDINS220-204ENST00000471275 OSCARQ8IYS5 282 aa16.09■□□□□ 0.17
KIDINS220-204ENST00000471275 RNF39Q9H2S5 420 aa16.07■□□□□ 0.16
KIDINS220-204ENST00000471275 IFT140Q96RY7 1462 aa16.04■□□□□ 0.16
KIDINS220-204ENST00000471275 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
KIDINS220-204ENST00000471275 PRDM2Q13029 1718 aa16.03■□□□□ 0.16
KIDINS220-204ENST00000471275 TRIM41Q8WV44 630 aa16.01■□□□□ 0.15
KIDINS220-204ENST00000471275 TOPBP1Q92547 1522 aa15.99■□□□□ 0.15
KIDINS220-204ENST00000471275 ZNF608Q9ULD9 1512 aaPredicted RBP15.94■□□□□ 0.14
KIDINS220-204ENST00000471275 DNMBPQ6XZF7 1577 aa15.93■□□□□ 0.14
KIDINS220-204ENST00000471275 EIF4G3O43432 1585 aaKnown RBP15.85■□□□□ 0.13
KIDINS220-204ENST00000471275 TARBP1Q13395 1621 aaKnown RBP15.84■□□□□ 0.13
KIDINS220-204ENST00000471275 POLA1P09884 1462 aaPredicted RBP15.83■□□□□ 0.12
KIDINS220-204ENST00000471275 ARHGEF11O15085 1522 aa15.81■□□□□ 0.12
KIDINS220-204ENST00000471275 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
KIDINS220-204ENST00000471275 RIMBP3CA6NJZ7 1639 aa15.8■□□□□ 0.12
KIDINS220-204ENST00000471275 RIMBP3BA6NNM3 1639 aa15.8■□□□□ 0.12
KIDINS220-204ENST00000471275 RIMBP3Q9UFD9 1639 aa15.8■□□□□ 0.12
KIDINS220-204ENST00000471275 AQRO60306 1485 aaKnown RBP eCLIP15.79■□□□□ 0.122e-9■■■■■ 39.4
KIDINS220-204ENST00000471275 WDR97A6NE52 1622 aa15.78■□□□□ 0.12
KIDINS220-204ENST00000471275 NPM3O75607 178 aaKnown RBP15.76■□□□□ 0.11
KIDINS220-204ENST00000471275 SOGA1O94964 1423 aa15.76■□□□□ 0.11
KIDINS220-204ENST00000471275 C1QBPQ07021 282 aaKnown RBP15.75■□□□□ 0.11
KIDINS220-204ENST00000471275 RAD54L2Q9Y4B4 1467 aa15.71■□□□□ 0.11
KIDINS220-204ENST00000471275 TDRD9Q8NDG6 1382 aaKnown RBP15.7■□□□□ 0.1
KIDINS220-204ENST00000471275 FGD5Q6ZNL6 1462 aa15.7■□□□□ 0.1
KIDINS220-204ENST00000471275 CUX1P39880 1505 aa15.68■□□□□ 0.1
KIDINS220-204ENST00000471275 MAGI1Q96QZ7 1491 aaPredicted RBP15.67■□□□□ 0.1
KIDINS220-204ENST00000471275 CHD1O14646 1710 aa15.66■□□□□ 0.1
KIDINS220-204ENST00000471275 CYB5RLQ6IPT4 315 aa15.65■□□□□ 0.1
KIDINS220-204ENST00000471275 GRIN2BQ13224 1484 aa15.65■□□□□ 0.1
KIDINS220-204ENST00000471275 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
KIDINS220-204ENST00000471275 ARAP1Q96P48 1450 aa15.65■□□□□ 0.1
KIDINS220-204ENST00000471275 FBLN2P98095 1184 aa15.64■□□□□ 0.09
KIDINS220-204ENST00000471275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms