RNA–Protein interactions for RNA: ENST00000470310.5

PCOLCE2-203, Transcript of procollagen C-endopeptidase enhancer 2, humanhuman

TSL 5

Gene PCOLCE2, Length 728 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE2-203ENST00000470310 AEBP2Q6ZN18 517 aaPredicted RBP29.29■■■□□ 2.28
PCOLCE2-203ENST00000470310 CHIC1Q5VXU3 224 aa27.4■■□□□ 1.98
PCOLCE2-203ENST00000470310 SENP3Q9H4L4 574 aaPredicted RBP25.12■■□□□ 1.61
PCOLCE2-203ENST00000470310 PHF23Q9BUL5 403 aaPredicted RBP24.7■■□□□ 1.54
PCOLCE2-203ENST00000470310 FOXD1Q16676 465 aa23.5■■□□□ 1.35
PCOLCE2-203ENST00000470310 NISCHQ9Y2I1 1504 aa23.49■■□□□ 1.35
PCOLCE2-203ENST00000470310 POTEDQ86YR6 584 aa22.96■■□□□ 1.27
PCOLCE2-203ENST00000470310 MSH5O43196 834 aa22.27■■□□□ 1.16
PCOLCE2-203ENST00000470310 PIAS4Q8N2W9 510 aaPredicted RBP21.84■■□□□ 1.09
PCOLCE2-203ENST00000470310 PPP6R1Q9UPN7 881 aa21.41■■□□□ 1.02
PCOLCE2-203ENST00000470310 PLPPR3Q6T4P5 718 aa21.38■■□□□ 1.01
PCOLCE2-203ENST00000470310 ADRA2BP18089 450 aa21.33■■□□□ 1.01
PCOLCE2-203ENST00000470310 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
PCOLCE2-203ENST00000470310 ABCC9O60706 1549 aa20.91■□□□□ 0.94
PCOLCE2-203ENST00000470310 RB1CC1Q8TDY2 1594 aa19.99■□□□□ 0.79
PCOLCE2-203ENST00000470310 NACADO15069 1562 aa19.87■□□□□ 0.77
PCOLCE2-203ENST00000470310 MAPK8IP2Q13387 824 aaPredicted RBP19.81■□□□□ 0.76
PCOLCE2-203ENST00000470310 DMRT2Q9Y5R5 561 aa19.79■□□□□ 0.76
PCOLCE2-203ENST00000470310 UNC13AQ9UPW8 1703 aa19.67■□□□□ 0.74
PCOLCE2-203ENST00000470310 MYO15BQ96JP2 1530 aa19.65■□□□□ 0.74
PCOLCE2-203ENST00000470310 DCAF8L2P0C7V8 631 aa19.64■□□□□ 0.73
PCOLCE2-203ENST00000470310 CACNB1Q02641 598 aaPredicted RBP19.6■□□□□ 0.73
PCOLCE2-203ENST00000470310 SCAF1Q9H7N4 1312 aaKnown RBP19.52■□□□□ 0.72
PCOLCE2-203ENST00000470310 ZCCHC6Q5VYS8 1495 aaKnown RBP19.5■□□□□ 0.71
PCOLCE2-203ENST00000470310 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
PCOLCE2-203ENST00000470310 BICRAQ9NZM4 1560 aa19.44■□□□□ 0.7
PCOLCE2-203ENST00000470310 DCAF1Q9Y4B6 1507 aa19.43■□□□□ 0.7
PCOLCE2-203ENST00000470310 PABPN1Q86U42 306 aaKnown RBP eCLIP19.42■□□□□ 0.7
PCOLCE2-203ENST00000470310 SCRIBQ14160 1630 aa19.19■□□□□ 0.66
PCOLCE2-203ENST00000470310 SHROOM4Q9ULL8 1493 aa19.16■□□□□ 0.66
PCOLCE2-203ENST00000470310 DCAF8L1A6NGE4 600 aa19.16■□□□□ 0.66
PCOLCE2-203ENST00000470310 CC2D2AQ9P2K1 1620 aa18.95■□□□□ 0.62
PCOLCE2-203ENST00000470310 EIF4G1Q04637 1599 aaKnown RBP18.93■□□□□ 0.62
PCOLCE2-203ENST00000470310 RNF39Q9H2S5 420 aa18.91■□□□□ 0.62
PCOLCE2-203ENST00000470310 CECR2Q9BXF3 1484 aa18.83■□□□□ 0.6
PCOLCE2-203ENST00000470310 HOXD11P31277 338 aaPredicted RBP18.75■□□□□ 0.59
PCOLCE2-203ENST00000470310 PPP4R3CPQ6ZMV5 832 aa18.64■□□□□ 0.57
PCOLCE2-203ENST00000470310 C1QBPQ07021 282 aaKnown RBP18.6■□□□□ 0.57
PCOLCE2-203ENST00000470310 CNKSR2Q8WXI2 1034 aa18.45■□□□□ 0.54
PCOLCE2-203ENST00000470310 RNF216Q9NWF9 866 aaPredicted RBP18.45■□□□□ 0.54
PCOLCE2-203ENST00000470310 SMARCA4P51532 1647 aa18.34■□□□□ 0.53
PCOLCE2-203ENST00000470310 NCAPD3P42695 1498 aa18.32■□□□□ 0.52
PCOLCE2-203ENST00000470310 ATAD2BQ9ULI0 1458 aa18.27■□□□□ 0.52
PCOLCE2-203ENST00000470310 SMARCA2P51531 1590 aa18.25■□□□□ 0.51
PCOLCE2-203ENST00000470310 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
PCOLCE2-203ENST00000470310 BAZ1AQ9NRL2 1556 aaPredicted RBP18.23■□□□□ 0.51
PCOLCE2-203ENST00000470310 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
PCOLCE2-203ENST00000470310 BAZ1BQ9UIG0 1483 aaKnown RBP18.11■□□□□ 0.49
PCOLCE2-203ENST00000470310 MROH2BQ7Z745 1585 aa18.09■□□□□ 0.49
PCOLCE2-203ENST00000470310 ERCC6Q03468 1493 aa18.03■□□□□ 0.48
PCOLCE2-203ENST00000470310 NESP48681 1621 aa18.01■□□□□ 0.47
PCOLCE2-203ENST00000470310 CUX2O14529 1486 aa18.01■□□□□ 0.47
PCOLCE2-203ENST00000470310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.97■□□□□ 0.47
PCOLCE2-203ENST00000470310 LAMC3Q9Y6N6 1575 aa17.93■□□□□ 0.46
PCOLCE2-203ENST00000470310 WIZO95785 1651 aa17.93■□□□□ 0.46
PCOLCE2-203ENST00000470310 POTEHQ6S545 545 aa17.88■□□□□ 0.45
PCOLCE2-203ENST00000470310 THOC2Q8NI27 1593 aaKnown RBP17.87■□□□□ 0.45
PCOLCE2-203ENST00000470310 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
PCOLCE2-203ENST00000470310 DNAJC5Q9H3Z4 198 aa17.83■□□□□ 0.44
PCOLCE2-203ENST00000470310 PDS5BQ9NTI5 1447 aa17.75■□□□□ 0.43
PCOLCE2-203ENST00000470310 CADPSQ9ULU8 1353 aa17.74■□□□□ 0.43
PCOLCE2-203ENST00000470310 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
PCOLCE2-203ENST00000470310 NCBP3Q53F19 620 aaKnown RBP17.72■□□□□ 0.43
PCOLCE2-203ENST00000470310 TOP2AP11388 1531 aaKnown RBP17.68■□□□□ 0.42
PCOLCE2-203ENST00000470310 MRC2Q9UBG0 1479 aa17.63■□□□□ 0.41
PCOLCE2-203ENST00000470310 WDR62O43379 1518 aa17.62■□□□□ 0.41
PCOLCE2-203ENST00000470310 CFTRP13569 1480 aa17.59■□□□□ 0.41
PCOLCE2-203ENST00000470310 PRDM2Q13029 1718 aa17.58■□□□□ 0.4
PCOLCE2-203ENST00000470310 CEP164Q9UPV0 1460 aa17.57■□□□□ 0.4
PCOLCE2-203ENST00000470310 FANCD2Q9BXW9 1451 aa17.56■□□□□ 0.4
PCOLCE2-203ENST00000470310 CAPN15O75808 1086 aa17.5■□□□□ 0.39
PCOLCE2-203ENST00000470310 DSG3P32926 999 aa17.49■□□□□ 0.39
PCOLCE2-203ENST00000470310 U3KPZ7 1027 aaPredicted RBP17.46■□□□□ 0.39
PCOLCE2-203ENST00000470310 NPM3O75607 178 aaKnown RBP17.45■□□□□ 0.38
PCOLCE2-203ENST00000470310 SPINK5Q9NQ38 1064 aaPredicted RBP17.45■□□□□ 0.38
PCOLCE2-203ENST00000470310 CCDC88BA6NC98 1476 aa17.44■□□□□ 0.38
PCOLCE2-203ENST00000470310 URB2Q14146 1524 aaKnown RBP17.43■□□□□ 0.38
PCOLCE2-203ENST00000470310 TOPBP1Q92547 1522 aa17.26■□□□□ 0.35
PCOLCE2-203ENST00000470310 DNMBPQ6XZF7 1577 aa17.22■□□□□ 0.35
PCOLCE2-203ENST00000470310 ABCC8Q09428 1581 aa17.21■□□□□ 0.35
PCOLCE2-203ENST00000470310 IFT140Q96RY7 1462 aa17.21■□□□□ 0.35
PCOLCE2-203ENST00000470310 ZNF608Q9ULD9 1512 aaPredicted RBP17.19■□□□□ 0.34
PCOLCE2-203ENST00000470310 EIF4G3O43432 1585 aaKnown RBP17.15■□□□□ 0.34
PCOLCE2-203ENST00000470310 TARBP1Q13395 1621 aaKnown RBP17.14■□□□□ 0.33
PCOLCE2-203ENST00000470310 OSCARQ8IYS5 282 aa17.12■□□□□ 0.33
PCOLCE2-203ENST00000470310 POLA1P09884 1462 aaPredicted RBP17.08■□□□□ 0.32
PCOLCE2-203ENST00000470310 TRHP20396 242 aaPredicted RBP17.06■□□□□ 0.32
PCOLCE2-203ENST00000470310 TRIM41Q8WV44 630 aa17.05■□□□□ 0.32
PCOLCE2-203ENST00000470310 CHD1O14646 1710 aa17.04■□□□□ 0.32
PCOLCE2-203ENST00000470310 ABCB7O75027 752 aa17.04■□□□□ 0.32
PCOLCE2-203ENST00000470310 AQRO60306 1485 aaKnown RBP eCLIP17.01■□□□□ 0.31
PCOLCE2-203ENST00000470310 CUX1P39880 1505 aa17.01■□□□□ 0.31
PCOLCE2-203ENST00000470310 RIMBP3CA6NJZ7 1639 aa17■□□□□ 0.31
PCOLCE2-203ENST00000470310 RIMBP3BA6NNM3 1639 aa17■□□□□ 0.31
PCOLCE2-203ENST00000470310 RIMBP3Q9UFD9 1639 aa17■□□□□ 0.31
PCOLCE2-203ENST00000470310 RAD54L2Q9Y4B4 1467 aa16.99■□□□□ 0.31
PCOLCE2-203ENST00000470310 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
PCOLCE2-203ENST00000470310 WDR97A6NE52 1622 aa16.98■□□□□ 0.31
PCOLCE2-203ENST00000470310 SOGA1O94964 1423 aa16.96■□□□□ 0.31
PCOLCE2-203ENST00000470310 ZNF219Q9P2Y4 722 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 335 ms