RNA–Protein interactions for RNA: ENST00000469325.5

VAV3-204, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene VAV3, Length 2,487 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-204ENST00000469325 AEBP2Q6ZN18 517 aaPredicted RBP12.26□□□□□ -0.45
VAV3-204ENST00000469325 CHIC1Q5VXU3 224 aa11.7□□□□□ -0.54
VAV3-204ENST00000469325 NISCHQ9Y2I1 1504 aa11.07□□□□□ -0.64
VAV3-204ENST00000469325 SENP3Q9H4L4 574 aaPredicted RBP10.74□□□□□ -0.69
VAV3-204ENST00000469325 PHF23Q9BUL5 403 aaPredicted RBP10.43□□□□□ -0.74
VAV3-204ENST00000469325 FOXD1Q16676 465 aa9.88□□□□□ -0.83
VAV3-204ENST00000469325 POTEDQ86YR6 584 aa9.61□□□□□ -0.87
VAV3-204ENST00000469325 MSH5O43196 834 aa9.56□□□□□ -0.88
VAV3-204ENST00000469325 CCDC180Q9P1Z9 1646 aa9.52□□□□□ -0.89
VAV3-204ENST00000469325 ZCCHC6Q5VYS8 1495 aaKnown RBP9.32□□□□□ -0.92
VAV3-204ENST00000469325 SHROOM4Q9ULL8 1493 aa9.26□□□□□ -0.93
VAV3-204ENST00000469325 DCAF8L2P0C7V8 631 aa9.25□□□□□ -0.93
VAV3-204ENST00000469325 PIAS4Q8N2W9 510 aaPredicted RBP9.17□□□□□ -0.94
VAV3-204ENST00000469325 PLPPR3Q6T4P5 718 aa9.15□□□□□ -0.94
VAV3-204ENST00000469325 DCAF1Q9Y4B6 1507 aa9.11□□□□□ -0.95
VAV3-204ENST00000469325 SUPT5HO00267 1087 aaKnown RBP9.02□□□□□ -0.97
VAV3-204ENST00000469325 ABCC9O60706 1549 aa8.95□□□□□ -0.98
VAV3-204ENST00000469325 MYO15BQ96JP2 1530 aa8.93□□□□□ -0.98
VAV3-204ENST00000469325 PPP6R1Q9UPN7 881 aa8.91□□□□□ -0.98
VAV3-204ENST00000469325 ADRA2BP18089 450 aa8.88□□□□□ -0.99
VAV3-204ENST00000469325 NACADO15069 1562 aa8.86□□□□□ -0.99
VAV3-204ENST00000469325 SCRIBQ14160 1630 aa8.85□□□□□ -0.99
VAV3-204ENST00000469325 RB1CC1Q8TDY2 1594 aa8.75□□□□□ -1.01
VAV3-204ENST00000469325 RSF1Q96T23 1441 aaPredicted RBP8.67□□□□□ -1.02
VAV3-204ENST00000469325 CECR2Q9BXF3 1484 aa8.61□□□□□ -1.03
VAV3-204ENST00000469325 MROH2BQ7Z745 1585 aa8.57□□□□□ -1.04
VAV3-204ENST00000469325 UNC13AQ9UPW8 1703 aa8.56□□□□□ -1.04
VAV3-204ENST00000469325 BAZ1AQ9NRL2 1556 aaPredicted RBP8.53□□□□□ -1.04
VAV3-204ENST00000469325 PABPN1Q86U42 306 aaKnown RBP eCLIP8.52□□□□□ -1.05
VAV3-204ENST00000469325 WIZO95785 1651 aa8.51□□□□□ -1.05
VAV3-204ENST00000469325 BICRAQ9NZM4 1560 aa8.47□□□□□ -1.05
VAV3-204ENST00000469325 SMARCA4P51532 1647 aa8.47□□□□□ -1.05
VAV3-204ENST00000469325 TRIM41Q8WV44 630 aa8.45□□□□□ -1.06
VAV3-204ENST00000469325 DMRT2Q9Y5R5 561 aa8.44□□□□□ -1.06
VAV3-204ENST00000469325 SCAF1Q9H7N4 1312 aaKnown RBP8.44□□□□□ -1.06
VAV3-204ENST00000469325 TOP2AP11388 1531 aaKnown RBP8.4□□□□□ -1.06
VAV3-204ENST00000469325 LOC105371045A0A1W2PR82 267 aa8.39□□□□□ -1.07
VAV3-204ENST00000469325 CCDC88BA6NC98 1476 aa8.35□□□□□ -1.07
VAV3-204ENST00000469325 SMARCA2P51531 1590 aa8.33□□□□□ -1.08
VAV3-204ENST00000469325 FAM9AQ8IZU1 332 aaPredicted RBP8.33□□□□□ -1.08
VAV3-204ENST00000469325 PEG3Q9GZU2 1588 aa8.32□□□□□ -1.08
VAV3-204ENST00000469325 ATAD2BQ9ULI0 1458 aa8.3□□□□□ -1.08
VAV3-204ENST00000469325 EIF4G1Q04637 1599 aaKnown RBP8.29□□□□□ -1.08
VAV3-204ENST00000469325 BAZ1BQ9UIG0 1483 aaKnown RBP8.28□□□□□ -1.08
VAV3-204ENST00000469325 ABCC8Q09428 1581 aa8.25□□□□□ -1.09
VAV3-204ENST00000469325 EHMT2Q96KQ7 1210 aa8.24□□□□□ -1.09
VAV3-204ENST00000469325 CACNB1Q02641 598 aaPredicted RBP8.24□□□□□ -1.09
VAV3-204ENST00000469325 PCGF6Q9BYE7 350 aa8.22□□□□□ -1.09
VAV3-204ENST00000469325 MAPK8IP2Q13387 824 aaPredicted RBP8.2□□□□□ -1.1
VAV3-204ENST00000469325 NCAPD3P42695 1498 aa8.19□□□□□ -1.1
VAV3-204ENST00000469325 WRNQ14191 1432 aaPredicted RBP eCLIP8.17□□□□□ -1.1
VAV3-204ENST00000469325 HMGXB3Q12766 1538 aa8.17□□□□□ -1.1
VAV3-204ENST00000469325 SOGA1O94964 1423 aa8.14□□□□□ -1.11
VAV3-204ENST00000469325 TRIM26Q12899 539 aaPredicted RBP8.13□□□□□ -1.11
VAV3-204ENST00000469325 EEA1Q15075 1411 aa8.13□□□□□ -1.11
VAV3-204ENST00000469325 CSRNP3Q8WYN3 585 aa8.12□□□□□ -1.11
VAV3-204ENST00000469325 SYNJ1O43426 1573 aa8.11□□□□□ -1.11
VAV3-204ENST00000469325 RUSC2Q8N2Y8 1516 aa8.09□□□□□ -1.11
VAV3-204ENST00000469325 UBTFP17480 764 aaKnown RBP8.08□□□□□ -1.12
VAV3-204ENST00000469325 HRCP23327 699 aa8.07□□□□□ -1.12
VAV3-204ENST00000469325 CFTRP13569 1480 aa8.06□□□□□ -1.12
VAV3-204ENST00000469325 CC2D2AQ9P2K1 1620 aa8.06□□□□□ -1.12
VAV3-204ENST00000469325 TOP2BQ02880 1626 aa8.05□□□□□ -1.12
VAV3-204ENST00000469325 TNIKQ9UKE5 1360 aa8.05□□□□□ -1.12
VAV3-204ENST00000469325 HOXD11P31277 338 aaPredicted RBP8.04□□□□□ -1.12
VAV3-204ENST00000469325 GOLGA3Q08378 1498 aa8.04□□□□□ -1.12
VAV3-204ENST00000469325 DNAJC5BQ9UF47 199 aa8.04□□□□□ -1.12
VAV3-204ENST00000469325 CEP162Q5TB80 1403 aa8.03□□□□□ -1.12
VAV3-204ENST00000469325 RNF39Q9H2S5 420 aa8.02□□□□□ -1.13
VAV3-204ENST00000469325 CADPSQ9ULU8 1353 aa8.02□□□□□ -1.13
VAV3-204ENST00000469325 CEP164Q9UPV0 1460 aa8.02□□□□□ -1.13
VAV3-204ENST00000469325 BIVM-ERCC5R4GMW8 1640 aa8.02□□□□□ -1.13
VAV3-204ENST00000469325 PPARGC1BQ86YN6 1023 aaKnown RBP8.02□□□□□ -1.13
VAV3-204ENST00000469325 CUX1P39880 1505 aa8□□□□□ -1.13
VAV3-204ENST00000469325 KIF21BO75037 1637 aa7.99□□□□□ -1.13
VAV3-204ENST00000469325 C1QBPQ07021 282 aaKnown RBP7.99□□□□□ -1.13
VAV3-204ENST00000469325 PRDM2Q13029 1718 aa7.98□□□□□ -1.13
VAV3-204ENST00000469325 RAPGEF2Q9Y4G8 1499 aa7.96□□□□□ -1.13
VAV3-204ENST00000469325 KIF27Q86VH2 1401 aa7.96□□□□□ -1.14
VAV3-204ENST00000469325 CLIP1P30622 1438 aa7.94□□□□□ -1.14
VAV3-204ENST00000469325 DCAF8L1A6NGE4 600 aa7.93□□□□□ -1.14
VAV3-204ENST00000469325 RANGAP1P46060 587 aaPredicted RBP7.93□□□□□ -1.14
VAV3-204ENST00000469325 FANCD2Q9BXW9 1451 aa7.93□□□□□ -1.14
VAV3-204ENST00000469325 TTBK1Q5TCY1 1321 aaPredicted RBP7.93□□□□□ -1.14
VAV3-204ENST00000469325 RNF216Q9NWF9 866 aaPredicted RBP7.92□□□□□ -1.14
VAV3-204ENST00000469325 PRXQ9BXM0 1461 aa7.92□□□□□ -1.14
VAV3-204ENST00000469325 ERICH3Q5RHP9 1530 aa7.91□□□□□ -1.14
VAV3-204ENST00000469325 CNKSR2Q8WXI2 1034 aa7.91□□□□□ -1.14
VAV3-204ENST00000469325 PPP4R3CPQ6ZMV5 832 aa7.9□□□□□ -1.14
VAV3-204ENST00000469325 NESP48681 1621 aa7.9□□□□□ -1.14
VAV3-204ENST00000469325 CUX2O14529 1486 aa7.9□□□□□ -1.15
VAV3-204ENST00000469325 FGD5Q6ZNL6 1462 aa7.9□□□□□ -1.15
VAV3-204ENST00000469325 ZEB1P37275 1124 aaPredicted RBP7.89□□□□□ -1.15
VAV3-204ENST00000469325 APLP2Q06481 763 aa7.89□□□□□ -1.15
VAV3-204ENST00000469325 LAMC3Q9Y6N6 1575 aa7.88□□□□□ -1.15
VAV3-204ENST00000469325 VPS8Q8N3P4 1428 aa7.87□□□□□ -1.15
VAV3-204ENST00000469325 IGF1RP08069 1367 aa7.87□□□□□ -1.15
VAV3-204ENST00000469325 DNMBPQ6XZF7 1577 aa7.86□□□□□ -1.15
VAV3-204ENST00000469325 PDS5BQ9NTI5 1447 aa7.85□□□□□ -1.15
VAV3-204ENST00000469325 TOPBP1Q92547 1522 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms