RNA–Protein interactions for RNA: ENST00000468778.5

WDR54-206, Transcript of WD repeat domain 54, humanhuman

TSL 2

Gene WDR54, Length 2,356 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR54-206ENST00000468778 NISCHQ9Y2I1 1504 aa28.07■■■□□ 2.08
WDR54-206ENST00000468778 CCDC180Q9P1Z9 1646 aa24.63■■□□□ 1.53
WDR54-206ENST00000468778 SHROOM4Q9ULL8 1493 aa23.92■■□□□ 1.42
WDR54-206ENST00000468778 ZCCHC6Q5VYS8 1495 aaKnown RBP23.83■■□□□ 1.41
WDR54-206ENST00000468778 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
WDR54-206ENST00000468778 ABCC9O60706 1549 aa23.33■■□□□ 1.33
WDR54-206ENST00000468778 CHIC1Q5VXU3 224 aa23.23■■□□□ 1.31
WDR54-206ENST00000468778 DCAF1Q9Y4B6 1507 aa23.2■■□□□ 1.3
WDR54-206ENST00000468778 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.3
WDR54-206ENST00000468778 HRCP23327 699 aa23.11■■□□□ 1.29
WDR54-206ENST00000468778 NACADO15069 1562 aa22.98■■□□□ 1.27
WDR54-206ENST00000468778 DCAF8L2P0C7V8 631 aa22.96■■□□□ 1.27
WDR54-206ENST00000468778 RB1CC1Q8TDY2 1594 aa22.83■■□□□ 1.25
WDR54-206ENST00000468778 PCGF6Q9BYE7 350 aa22.77■■□□□ 1.24
WDR54-206ENST00000468778 LOC105371045A0A1W2PR82 267 aa22.43■■□□□ 1.18
WDR54-206ENST00000468778 TRIM26Q12899 539 aaPredicted RBP22.42■■□□□ 1.18
WDR54-206ENST00000468778 SCRIBQ14160 1630 aa22.39■■□□□ 1.18
WDR54-206ENST00000468778 PPARGC1BQ86YN6 1023 aaKnown RBP22.35■■□□□ 1.17
WDR54-206ENST00000468778 RSF1Q96T23 1441 aaPredicted RBP22.3■■□□□ 1.16
WDR54-206ENST00000468778 UNC13AQ9UPW8 1703 aa22.3■■□□□ 1.16
WDR54-206ENST00000468778 ZEB1P37275 1124 aaPredicted RBP22.19■■□□□ 1.14
WDR54-206ENST00000468778 AEBP2Q6ZN18 517 aaPredicted RBP22.15■■□□□ 1.14
WDR54-206ENST00000468778 TRIM41Q8WV44 630 aa22.12■■□□□ 1.13
WDR54-206ENST00000468778 BICRAQ9NZM4 1560 aa22.07■■□□□ 1.12
WDR54-206ENST00000468778 PABPN1Q86U42 306 aaKnown RBP eCLIP21.85■■□□□ 1.09
WDR54-206ENST00000468778 FAM9AQ8IZU1 332 aaPredicted RBP21.79■■□□□ 1.08
WDR54-206ENST00000468778 MROH2BQ7Z745 1585 aa21.76■■□□□ 1.07
WDR54-206ENST00000468778 CECR2Q9BXF3 1484 aa21.75■■□□□ 1.07
WDR54-206ENST00000468778 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
WDR54-206ENST00000468778 PELP1Q8IZL8 1130 aaKnown RBP21.63■■□□□ 1.05
WDR54-206ENST00000468778 WIZO95785 1651 aa21.63■■□□□ 1.05
WDR54-206ENST00000468778 EIF4G1Q04637 1599 aaKnown RBP21.56■■□□□ 1.04
WDR54-206ENST00000468778 SMARCA4P51532 1647 aa21.53■■□□□ 1.04
WDR54-206ENST00000468778 SLC24A1O60721 1099 aa21.48■■□□□ 1.03
WDR54-206ENST00000468778 EHMT2Q96KQ7 1210 aa21.47■■□□□ 1.03
WDR54-206ENST00000468778 TOP2AP11388 1531 aaKnown RBP21.42■■□□□ 1.02
WDR54-206ENST00000468778 WRNQ14191 1432 aaPredicted RBP eCLIP21.42■■□□□ 1.02
WDR54-206ENST00000468778 SCAF1Q9H7N4 1312 aaKnown RBP21.38■■□□□ 1.01
WDR54-206ENST00000468778 CCER1Q8TC90 406 aaPredicted RBP21.36■■□□□ 1.01
WDR54-206ENST00000468778 PEG3Q9GZU2 1588 aa21.36■■□□□ 1.01
WDR54-206ENST00000468778 EEA1Q15075 1411 aa21.31■■□□□ 1
WDR54-206ENST00000468778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.3■■□□□ 1
WDR54-206ENST00000468778 SMARCA2P51531 1590 aa21.29■■□□□ 1
WDR54-206ENST00000468778 CCDC88BA6NC98 1476 aa21.27■■□□□ 1
WDR54-206ENST00000468778 TNIKQ9UKE5 1360 aa21.26■□□□□ 0.99
WDR54-206ENST00000468778 CEP162Q5TB80 1403 aa21.25■□□□□ 0.99
WDR54-206ENST00000468778 ATAD2BQ9ULI0 1458 aa21.23■□□□□ 0.99
WDR54-206ENST00000468778 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
WDR54-206ENST00000468778 CC2D2AQ9P2K1 1620 aa21.19■□□□□ 0.98
WDR54-206ENST00000468778 ACIN1Q9UKV3 1341 aaKnown RBP21.18■□□□□ 0.98
WDR54-206ENST00000468778 NCAPD3P42695 1498 aa21.16■□□□□ 0.98
WDR54-206ENST00000468778 HMGXB3Q12766 1538 aa21.14■□□□□ 0.98
WDR54-206ENST00000468778 DIEXFQ68CQ4 756 aaKnown RBP21.13■□□□□ 0.97
WDR54-206ENST00000468778 SOGA1O94964 1423 aa21.12■□□□□ 0.97
WDR54-206ENST00000468778 CENPBP07199 599 aaPredicted RBP21.12■□□□□ 0.97
WDR54-206ENST00000468778 CSRNP3Q8WYN3 585 aa21.11■□□□□ 0.97
WDR54-206ENST00000468778 BAZ1BQ9UIG0 1483 aaKnown RBP21.1■□□□□ 0.97
WDR54-206ENST00000468778 GOLGA3Q08378 1498 aa21.08■□□□□ 0.97
WDR54-206ENST00000468778 NEUROD1Q13562 356 aa21.03■□□□□ 0.96
WDR54-206ENST00000468778 UBTFP17480 764 aaKnown RBP21■□□□□ 0.95
WDR54-206ENST00000468778 RUSC2Q8N2Y8 1516 aa20.94■□□□□ 0.94
WDR54-206ENST00000468778 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
WDR54-206ENST00000468778 ZNF316A6NFI3 1004 aaPredicted RBP20.93■□□□□ 0.94
WDR54-206ENST00000468778 KIF21BO75037 1637 aa20.92■□□□□ 0.94
WDR54-206ENST00000468778 TTBK1Q5TCY1 1321 aaPredicted RBP20.91■□□□□ 0.94
WDR54-206ENST00000468778 GTF3C3Q9Y5Q9 886 aa20.88■□□□□ 0.93
WDR54-206ENST00000468778 CLIP1P30622 1438 aa20.81■□□□□ 0.92
WDR54-206ENST00000468778 VPS8Q8N3P4 1428 aa20.79■□□□□ 0.92
WDR54-206ENST00000468778 SYNJ1O43426 1573 aa20.78■□□□□ 0.92
WDR54-206ENST00000468778 DNAJC5BQ9UF47 199 aa20.78■□□□□ 0.92
WDR54-206ENST00000468778 MYT1Q01538 1121 aa20.72■□□□□ 0.91
WDR54-206ENST00000468778 APLP2Q06481 763 aa20.71■□□□□ 0.91
WDR54-206ENST00000468778 HNRNPUL2Q1KMD3 747 aaKnown RBP20.65■□□□□ 0.9
WDR54-206ENST00000468778 CLSPNQ9HAW4 1339 aa20.64■□□□□ 0.89
WDR54-206ENST00000468778 RAPGEF2Q9Y4G8 1499 aa20.63■□□□□ 0.89
WDR54-206ENST00000468778 TOP2BQ02880 1626 aa20.58■□□□□ 0.89
WDR54-206ENST00000468778 CFTRP13569 1480 aa20.57■□□□□ 0.88
WDR54-206ENST00000468778 ERICH3Q5RHP9 1530 aa20.56■□□□□ 0.88
WDR54-206ENST00000468778 MIER1Q8N108 512 aa20.56■□□□□ 0.88
WDR54-206ENST00000468778 PRDM2Q13029 1718 aa20.55■□□□□ 0.88
WDR54-206ENST00000468778 CADPSQ9ULU8 1353 aa20.54■□□□□ 0.88
WDR54-206ENST00000468778 LAMC3Q9Y6N6 1575 aa20.53■□□□□ 0.88
WDR54-206ENST00000468778 YTHDC1Q96MU7 727 aaKnown RBP20.51■□□□□ 0.87
WDR54-206ENST00000468778 BIVM-ERCC5R4GMW8 1640 aa20.51■□□□□ 0.87
WDR54-206ENST00000468778 PRXQ9BXM0 1461 aa20.47■□□□□ 0.87
WDR54-206ENST00000468778 DHX57Q6P158 1386 aaKnown RBP20.41■□□□□ 0.86
WDR54-206ENST00000468778 ARAP1Q96P48 1450 aa20.4■□□□□ 0.86
WDR54-206ENST00000468778 RRBP1Q9P2E9 1410 aaKnown RBP20.37■□□□□ 0.85
WDR54-206ENST00000468778 NESP48681 1621 aa20.36■□□□□ 0.85
WDR54-206ENST00000468778 CUX2O14529 1486 aa20.34■□□□□ 0.85
WDR54-206ENST00000468778 PDS5BQ9NTI5 1447 aa20.34■□□□□ 0.85
WDR54-206ENST00000468778 KIF27Q86VH2 1401 aa20.33■□□□□ 0.84
WDR54-206ENST00000468778 RANGAP1P46060 587 aaPredicted RBP20.32■□□□□ 0.84
WDR54-206ENST00000468778 FANCD2Q9BXW9 1451 aa20.3■□□□□ 0.84
WDR54-206ENST00000468778 CUX1P39880 1505 aa20.25■□□□□ 0.83
WDR54-206ENST00000468778 KANK4Q5T7N3 995 aaPredicted RBP20.25■□□□□ 0.83
WDR54-206ENST00000468778 CCNB3Q8WWL7 1395 aa20.24■□□□□ 0.83
WDR54-206ENST00000468778 KIF21AQ7Z4S6 1674 aa20.22■□□□□ 0.83
WDR54-206ENST00000468778 ARHGAP35Q9NRY4 1499 aa20.19■□□□□ 0.82
WDR54-206ENST00000468778 MAP3K1Q13233 1512 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms