RNA–Protein interactions for RNA: ENST00000466031.5

CCDC13-203, Transcript of coiled-coil domain containing 13, humanhuman

TSL 3

Gene CCDC13, Length 479 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-203ENST00000466031 NISCHQ9Y2I1 1504 aa15.82■□□□□ 0.12
CCDC13-203ENST00000466031 CHIC1Q5VXU3 224 aa15.18■□□□□ 0.02
CCDC13-203ENST00000466031 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
CCDC13-203ENST00000466031 AEBP2Q6ZN18 517 aaPredicted RBP15.04■□□□□ -0
CCDC13-203ENST00000466031 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.01
CCDC13-203ENST00000466031 ABCC9O60706 1549 aa14.77□□□□□ -0.04
CCDC13-203ENST00000466031 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
CCDC13-203ENST00000466031 TRIM41Q8WV44 630 aa13.72□□□□□ -0.21
CCDC13-203ENST00000466031 PABPN1Q86U42 306 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCDC13-203ENST00000466031 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
CCDC13-203ENST00000466031 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
CCDC13-203ENST00000466031 PHF23Q9BUL5 403 aaPredicted RBP13.4□□□□□ -0.26
CCDC13-203ENST00000466031 DCAF8L2P0C7V8 631 aa13.39□□□□□ -0.27
CCDC13-203ENST00000466031 NACADO15069 1562 aa13.37□□□□□ -0.27
CCDC13-203ENST00000466031 CUX2O14529 1486 aa13.36□□□□□ -0.27
CCDC13-203ENST00000466031 CC2D2AQ9P2K1 1620 aa13.29□□□□□ -0.28
CCDC13-203ENST00000466031 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
CCDC13-203ENST00000466031 MYO15BQ96JP2 1530 aa13.17□□□□□ -0.3
CCDC13-203ENST00000466031 ZCCHC6Q5VYS8 1495 aaKnown RBP13.1□□□□□ -0.31
CCDC13-203ENST00000466031 BICRAQ9NZM4 1560 aa13.07□□□□□ -0.32
CCDC13-203ENST00000466031 DCAF1Q9Y4B6 1507 aa13.05□□□□□ -0.32
CCDC13-203ENST00000466031 ILDR1Q86SU0 546 aaPredicted RBP13.05□□□□□ -0.32
CCDC13-203ENST00000466031 SCRIBQ14160 1630 aa12.94□□□□□ -0.34
CCDC13-203ENST00000466031 ERCC6Q03468 1493 aa12.92□□□□□ -0.34
CCDC13-203ENST00000466031 EIF4G1Q04637 1599 aaKnown RBP12.91□□□□□ -0.34
CCDC13-203ENST00000466031 SHROOM4Q9ULL8 1493 aa12.86□□□□□ -0.35
CCDC13-203ENST00000466031 TRHP20396 242 aaPredicted RBP12.72□□□□□ -0.37
CCDC13-203ENST00000466031 SENP3Q9H4L4 574 aaPredicted RBP12.71□□□□□ -0.37
CCDC13-203ENST00000466031 OSCARQ8IYS5 282 aa12.6□□□□□ -0.39
CCDC13-203ENST00000466031 PLPPR3Q6T4P5 718 aa12.56□□□□□ -0.4
CCDC13-203ENST00000466031 RIMBP3CA6NJZ7 1639 aa12.47□□□□□ -0.41
CCDC13-203ENST00000466031 RIMBP3BA6NNM3 1639 aa12.47□□□□□ -0.41
CCDC13-203ENST00000466031 RIMBP3Q9UFD9 1639 aa12.47□□□□□ -0.41
CCDC13-203ENST00000466031 BAZ1AQ9NRL2 1556 aaPredicted RBP12.43□□□□□ -0.42
CCDC13-203ENST00000466031 THOC2Q8NI27 1593 aaKnown RBP12.42□□□□□ -0.42
CCDC13-203ENST00000466031 CYB5RLQ6IPT4 315 aa12.36□□□□□ -0.43
CCDC13-203ENST00000466031 SMARCA4P51532 1647 aa12.34□□□□□ -0.43
CCDC13-203ENST00000466031 SOCS7O14512 581 aa12.33□□□□□ -0.44
CCDC13-203ENST00000466031 NCAPD3P42695 1498 aa12.31□□□□□ -0.44
CCDC13-203ENST00000466031 LMTK3Q96Q04 1460 aa12.29□□□□□ -0.44
CCDC13-203ENST00000466031 ATAD2BQ9ULI0 1458 aa12.29□□□□□ -0.44
CCDC13-203ENST00000466031 SMARCA2P51531 1590 aa12.28□□□□□ -0.44
CCDC13-203ENST00000466031 ARHGEF11O15085 1522 aa12.27□□□□□ -0.44
CCDC13-203ENST00000466031 NESP48681 1621 aa12.26□□□□□ -0.45
CCDC13-203ENST00000466031 HMGXB3Q12766 1538 aa12.23□□□□□ -0.45
CCDC13-203ENST00000466031 FBXO41Q8TF61 875 aa12.22□□□□□ -0.45
CCDC13-203ENST00000466031 MROH2BQ7Z745 1585 aa12.19□□□□□ -0.46
CCDC13-203ENST00000466031 BAZ1BQ9UIG0 1483 aaKnown RBP12.19□□□□□ -0.46
CCDC13-203ENST00000466031 PEG3Q9GZU2 1588 aa12.18□□□□□ -0.46
CCDC13-203ENST00000466031 WIZO95785 1651 aa12.11□□□□□ -0.47
CCDC13-203ENST00000466031 KIF21AQ7Z4S6 1674 aa12.1□□□□□ -0.47
CCDC13-203ENST00000466031 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
CCDC13-203ENST00000466031 ERCC6L2Q5T890 1561 aa12.05□□□□□ -0.48
CCDC13-203ENST00000466031 LAMC3Q9Y6N6 1575 aa12.05□□□□□ -0.48
CCDC13-203ENST00000466031 ILDR2Q71H61 639 aa12.04□□□□□ -0.48
CCDC13-203ENST00000466031 ARAP1Q96P48 1450 aa12.03□□□□□ -0.48
CCDC13-203ENST00000466031 KDM4FA0A1W2PPD8 638 aa11.98□□□□□ -0.49
CCDC13-203ENST00000466031 MRC2Q9UBG0 1479 aa11.97□□□□□ -0.49
CCDC13-203ENST00000466031 WDR62O43379 1518 aa11.96□□□□□ -0.49
CCDC13-203ENST00000466031 RSF1Q96T23 1441 aaPredicted RBP11.96□□□□□ -0.49
CCDC13-203ENST00000466031 CADPSQ9ULU8 1353 aa11.95□□□□□ -0.5
CCDC13-203ENST00000466031 DISP3Q9P2K9 1392 aa11.94□□□□□ -0.5
CCDC13-203ENST00000466031 TOP2AP11388 1531 aaKnown RBP11.9□□□□□ -0.5
CCDC13-203ENST00000466031 PRDM2Q13029 1718 aa11.85□□□□□ -0.51
CCDC13-203ENST00000466031 CFTRP13569 1480 aa11.83□□□□□ -0.52
CCDC13-203ENST00000466031 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
CCDC13-203ENST00000466031 CEP164Q9UPV0 1460 aa11.83□□□□□ -0.52
CCDC13-203ENST00000466031 HECW2Q9P2P5 1572 aa11.82□□□□□ -0.52
CCDC13-203ENST00000466031 CCDC88BA6NC98 1476 aa11.78□□□□□ -0.52
CCDC13-203ENST00000466031 ADRA2BP18089 450 aa11.76□□□□□ -0.53
CCDC13-203ENST00000466031 FOXD1Q16676 465 aa11.73□□□□□ -0.53
CCDC13-203ENST00000466031 URB2Q14146 1524 aaKnown RBP11.72□□□□□ -0.53
CCDC13-203ENST00000466031 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
CCDC13-203ENST00000466031 PPP6R1Q9UPN7 881 aa11.67□□□□□ -0.54
CCDC13-203ENST00000466031 CHD1O14646 1710 aa11.63□□□□□ -0.55
CCDC13-203ENST00000466031 TOPBP1Q92547 1522 aa11.61□□□□□ -0.55
CCDC13-203ENST00000466031 ABCC8Q09428 1581 aa11.61□□□□□ -0.55
CCDC13-203ENST00000466031 SPATA31D1Q6ZQQ2 1576 aa11.59□□□□□ -0.55
CCDC13-203ENST00000466031 FBLN2P98095 1184 aa11.59□□□□□ -0.55
CCDC13-203ENST00000466031 DNMBPQ6XZF7 1577 aa11.58□□□□□ -0.55
CCDC13-203ENST00000466031 IFT140Q96RY7 1462 aa11.57□□□□□ -0.56
CCDC13-203ENST00000466031 SUPT5HO00267 1087 aaKnown RBP11.57□□□□□ -0.56
CCDC13-203ENST00000466031 KIF13AQ9H1H9 1805 aa11.57□□□□□ -0.56
CCDC13-203ENST00000466031 ZNF608Q9ULD9 1512 aaPredicted RBP11.56□□□□□ -0.56
CCDC13-203ENST00000466031 ADGRL1O94910 1474 aa11.55□□□□□ -0.56
CCDC13-203ENST00000466031 TARBP1Q13395 1621 aaKnown RBP11.53□□□□□ -0.56
CCDC13-203ENST00000466031 KDM6BO15054 1643 aa11.52□□□□□ -0.57
CCDC13-203ENST00000466031 EIF4G3O43432 1585 aaKnown RBP11.51□□□□□ -0.57
CCDC13-203ENST00000466031 POLA1P09884 1462 aaPredicted RBP11.49□□□□□ -0.57
CCDC13-203ENST00000466031 AQRO60306 1485 aaKnown RBP eCLIP11.48□□□□□ -0.57
CCDC13-203ENST00000466031 GAPVD1Q14C86 1478 aa11.48□□□□□ -0.57
CCDC13-203ENST00000466031 RAD54L2Q9Y4B4 1467 aa11.47□□□□□ -0.57
CCDC13-203ENST00000466031 SOGA1O94964 1423 aa11.46□□□□□ -0.57
CCDC13-203ENST00000466031 CUX1P39880 1505 aa11.45□□□□□ -0.58
CCDC13-203ENST00000466031 FGD5Q6ZNL6 1462 aa11.44□□□□□ -0.58
CCDC13-203ENST00000466031 KCNA4P22459 653 aa11.44□□□□□ -0.58
CCDC13-203ENST00000466031 TDRD9Q8NDG6 1382 aaKnown RBP11.42□□□□□ -0.58
CCDC13-203ENST00000466031 CLASP1Q7Z460 1538 aa11.42□□□□□ -0.58
CCDC13-203ENST00000466031 FAM69CQ0P6D2 419 aa11.42□□□□□ -0.58
CCDC13-203ENST00000466031 CERKQ8TCT0 537 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms