RNA–Protein interactions for RNA: ENST00000465224.5

CNNM3-203, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 1 (best)

Gene CNNM3, Length 2,607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-203ENST00000465224 NISCHQ9Y2I1 1504 aa20.38■□□□□ 0.85
CNNM3-203ENST00000465224 CCDC180Q9P1Z9 1646 aa17.49■□□□□ 0.39
CNNM3-203ENST00000465224 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
CNNM3-203ENST00000465224 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
CNNM3-203ENST00000465224 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
CNNM3-203ENST00000465224 DCAF8L2P0C7V8 631 aa16.97■□□□□ 0.31
CNNM3-203ENST00000465224 PELP1Q8IZL8 1130 aaKnown RBP16.95■□□□□ 0.3
CNNM3-203ENST00000465224 CHIC1Q5VXU3 224 aa16.68■□□□□ 0.26
CNNM3-203ENST00000465224 DCAF1Q9Y4B6 1507 aa16.67■□□□□ 0.26
CNNM3-203ENST00000465224 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
CNNM3-203ENST00000465224 ABCC9O60706 1549 aa16.64■□□□□ 0.25
CNNM3-203ENST00000465224 MYT1Q01538 1121 aa16.58■□□□□ 0.24
CNNM3-203ENST00000465224 HRCP23327 699 aa16.44■□□□□ 0.22
CNNM3-203ENST00000465224 NACADO15069 1562 aa16.29■□□□□ 0.2
CNNM3-203ENST00000465224 SCRIBQ14160 1630 aa16.25■□□□□ 0.19
CNNM3-203ENST00000465224 LOC105371045A0A1W2PR82 267 aa16.25■□□□□ 0.19
CNNM3-203ENST00000465224 PCGF6Q9BYE7 350 aa16.21■□□□□ 0.19
CNNM3-203ENST00000465224 RSF1Q96T23 1441 aaPredicted RBP16.18■□□□□ 0.18
CNNM3-203ENST00000465224 RB1CC1Q8TDY2 1594 aa16.17■□□□□ 0.18
CNNM3-203ENST00000465224 PPARGC1BQ86YN6 1023 aaKnown RBP16.14■□□□□ 0.17
CNNM3-203ENST00000465224 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.15
CNNM3-203ENST00000465224 TRIM41Q8WV44 630 aa15.94■□□□□ 0.14
CNNM3-203ENST00000465224 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
CNNM3-203ENST00000465224 UNC13AQ9UPW8 1703 aa15.91■□□□□ 0.14
CNNM3-203ENST00000465224 MROH2BQ7Z745 1585 aa15.89■□□□□ 0.13
CNNM3-203ENST00000465224 FAM9AQ8IZU1 332 aaPredicted RBP15.87■□□□□ 0.13
CNNM3-203ENST00000465224 TRIM26Q12899 539 aaPredicted RBP15.84■□□□□ 0.13
CNNM3-203ENST00000465224 TTBK1Q5TCY1 1321 aaPredicted RBP15.83■□□□□ 0.12
CNNM3-203ENST00000465224 WIZO95785 1651 aa15.79■□□□□ 0.12
CNNM3-203ENST00000465224 EHMT2Q96KQ7 1210 aa15.77■□□□□ 0.11
CNNM3-203ENST00000465224 PABPN1Q86U42 306 aaKnown RBP eCLIP15.72■□□□□ 0.11
CNNM3-203ENST00000465224 BICRAQ9NZM4 1560 aa15.7■□□□□ 0.1
CNNM3-203ENST00000465224 BAZ1AQ9NRL2 1556 aaPredicted RBP15.64■□□□□ 0.09
CNNM3-203ENST00000465224 PRKCSHP14314 528 aaPredicted RBP15.57■□□□□ 0.08
CNNM3-203ENST00000465224 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
CNNM3-203ENST00000465224 SMARCA4P51532 1647 aa15.5■□□□□ 0.07
CNNM3-203ENST00000465224 TOP2AP11388 1531 aaKnown RBP15.5■□□□□ 0.07
CNNM3-203ENST00000465224 CCDC88BA6NC98 1476 aa15.49■□□□□ 0.07
CNNM3-203ENST00000465224 ABCC8Q09428 1581 aa15.47■□□□□ 0.07
CNNM3-203ENST00000465224 ZEB1P37275 1124 aaPredicted RBP15.45■□□□□ 0.06
CNNM3-203ENST00000465224 SMARCA2P51531 1590 aa15.44■□□□□ 0.06
CNNM3-203ENST00000465224 BCL11AQ9H165 835 aa15.42■□□□□ 0.06
CNNM3-203ENST00000465224 SOGA1O94964 1423 aa15.35■□□□□ 0.05
CNNM3-203ENST00000465224 ACIN1Q9UKV3 1341 aaKnown RBP15.3■□□□□ 0.04
CNNM3-203ENST00000465224 RUSC2Q8N2Y8 1516 aa15.29■□□□□ 0.04
CNNM3-203ENST00000465224 NEUROD1Q13562 356 aa15.27■□□□□ 0.04
CNNM3-203ENST00000465224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.03
CNNM3-203ENST00000465224 CEP162Q5TB80 1403 aa15.25■□□□□ 0.03
CNNM3-203ENST00000465224 CSRNP3Q8WYN3 585 aa15.23■□□□□ 0.03
CNNM3-203ENST00000465224 GTF3C3Q9Y5Q9 886 aa15.22■□□□□ 0.03
CNNM3-203ENST00000465224 PEG3Q9GZU2 1588 aa15.22■□□□□ 0.03
CNNM3-203ENST00000465224 DNAJC5Q9H3Z4 198 aa15.21■□□□□ 0.03
CNNM3-203ENST00000465224 WRNQ14191 1432 aaPredicted RBP eCLIP15.21■□□□□ 0.02
CNNM3-203ENST00000465224 TNIKQ9UKE5 1360 aa15.21■□□□□ 0.02
CNNM3-203ENST00000465224 ATAD2BQ9ULI0 1458 aa15.2■□□□□ 0.02
CNNM3-203ENST00000465224 UBTFP17480 764 aaKnown RBP15.18■□□□□ 0.02
CNNM3-203ENST00000465224 CCER1Q8TC90 406 aaPredicted RBP15.18■□□□□ 0.02
CNNM3-203ENST00000465224 ERICH6Q7L0X2 663 aa15.17■□□□□ 0.02
CNNM3-203ENST00000465224 EEA1Q15075 1411 aa15.16■□□□□ 0.02
CNNM3-203ENST00000465224 BAZ1BQ9UIG0 1483 aaKnown RBP15.13■□□□□ 0.01
CNNM3-203ENST00000465224 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
CNNM3-203ENST00000465224 GOLGA3Q08378 1498 aa15.09■□□□□ 0.01
CNNM3-203ENST00000465224 CENPBP07199 599 aaPredicted RBP15.09■□□□□ 0.01
CNNM3-203ENST00000465224 APLP2Q06481 763 aa15.06■□□□□ 0
CNNM3-203ENST00000465224 NCAPD3P42695 1498 aa15.03■□□□□ -0
CNNM3-203ENST00000465224 CC2D2AQ9P2K1 1620 aa15.03■□□□□ -0
CNNM3-203ENST00000465224 HMGXB3Q12766 1538 aa15.01□□□□□ -0.01
CNNM3-203ENST00000465224 CEP164Q9UPV0 1460 aa15□□□□□ -0.01
CNNM3-203ENST00000465224 KIF21BO75037 1637 aa14.97□□□□□ -0.01
CNNM3-203ENST00000465224 DNAJC5BQ9UF47 199 aa14.96□□□□□ -0.02
CNNM3-203ENST00000465224 CLIP1P30622 1438 aa14.95□□□□□ -0.02
CNNM3-203ENST00000465224 RAPGEF2Q9Y4G8 1499 aa14.95□□□□□ -0.02
CNNM3-203ENST00000465224 RANGAP1P46060 587 aaPredicted RBP14.93□□□□□ -0.02
CNNM3-203ENST00000465224 DIEXFQ68CQ4 756 aaKnown RBP14.9□□□□□ -0.02
CNNM3-203ENST00000465224 HNRNPUL2Q1KMD3 747 aaKnown RBP14.89□□□□□ -0.03
CNNM3-203ENST00000465224 TOP2BQ02880 1626 aa14.89□□□□□ -0.03
CNNM3-203ENST00000465224 VPS8Q8N3P4 1428 aa14.88□□□□□ -0.03
CNNM3-203ENST00000465224 BIVM-ERCC5R4GMW8 1640 aa14.82□□□□□ -0.04
CNNM3-203ENST00000465224 ZNF316A6NFI3 1004 aaPredicted RBP14.78□□□□□ -0.04
CNNM3-203ENST00000465224 ANP32EQ9BTT0 268 aa14.78□□□□□ -0.04
CNNM3-203ENST00000465224 CUX1P39880 1505 aa14.77□□□□□ -0.04
CNNM3-203ENST00000465224 PRXQ9BXM0 1461 aa14.77□□□□□ -0.04
CNNM3-203ENST00000465224 ERICH3Q5RHP9 1530 aa14.72□□□□□ -0.05
CNNM3-203ENST00000465224 ARAP1Q96P48 1450 aa14.72□□□□□ -0.05
CNNM3-203ENST00000465224 CFTRP13569 1480 aa14.72□□□□□ -0.05
CNNM3-203ENST00000465224 KANK4Q5T7N3 995 aaPredicted RBP14.71□□□□□ -0.06
CNNM3-203ENST00000465224 KIF27Q86VH2 1401 aa14.68□□□□□ -0.06
CNNM3-203ENST00000465224 CADPSQ9ULU8 1353 aa14.67□□□□□ -0.06
CNNM3-203ENST00000465224 PRDM2Q13029 1718 aa14.66□□□□□ -0.06
CNNM3-203ENST00000465224 NESP48681 1621 aa14.61□□□□□ -0.07
CNNM3-203ENST00000465224 MIER1Q8N108 512 aa14.61□□□□□ -0.07
CNNM3-203ENST00000465224 SLC24A1O60721 1099 aa14.6□□□□□ -0.07
CNNM3-203ENST00000465224 ARHGAP35Q9NRY4 1499 aa14.59□□□□□ -0.07
CNNM3-203ENST00000465224 YTHDC1Q96MU7 727 aaKnown RBP14.58□□□□□ -0.08
CNNM3-203ENST00000465224 DHX57Q6P158 1386 aaKnown RBP14.57□□□□□ -0.08
CNNM3-203ENST00000465224 IGF1RP08069 1367 aa14.57□□□□□ -0.08
CNNM3-203ENST00000465224 CUX2O14529 1486 aa14.56□□□□□ -0.08
CNNM3-203ENST00000465224 RRBP1Q9P2E9 1410 aaKnown RBP14.54□□□□□ -0.08
CNNM3-203ENST00000465224 FANCD2Q9BXW9 1451 aa14.54□□□□□ -0.08
CNNM3-203ENST00000465224 LAMC3Q9Y6N6 1575 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms