RNA–Protein interactions for RNA: ENST00000465111.5

TCEA2-209, Transcript of transcription elongation factor A2, humanhuman

TSL 2

Gene TCEA2, Length 2,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA2-209ENST00000465111 NISCHQ9Y2I1 1504 aa31.23■■■□□ 2.59
TCEA2-209ENST00000465111 CCDC180Q9P1Z9 1646 aa27.13■■□□□ 1.93
TCEA2-209ENST00000465111 SHROOM4Q9ULL8 1493 aa26.75■■□□□ 1.87
TCEA2-209ENST00000465111 ZCCHC6Q5VYS8 1495 aaKnown RBP26.52■■□□□ 1.84
TCEA2-209ENST00000465111 SUPT5HO00267 1087 aaKnown RBP26.42■■□□□ 1.82
TCEA2-209ENST00000465111 DCAF8L2P0C7V8 631 aa25.97■■□□□ 1.75
TCEA2-209ENST00000465111 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
TCEA2-209ENST00000465111 HRCP23327 699 aa25.93■■□□□ 1.74
TCEA2-209ENST00000465111 MYO15BQ96JP2 1530 aa25.92■■□□□ 1.74
TCEA2-209ENST00000465111 ABCC9O60706 1549 aa25.82■■□□□ 1.72
TCEA2-209ENST00000465111 DCAF1Q9Y4B6 1507 aa25.7■■□□□ 1.7
TCEA2-209ENST00000465111 PCGF6Q9BYE7 350 aa25.46■■□□□ 1.67
TCEA2-209ENST00000465111 PPARGC1BQ86YN6 1023 aaKnown RBP25.25■■□□□ 1.63
TCEA2-209ENST00000465111 NACADO15069 1562 aa25.23■■□□□ 1.63
TCEA2-209ENST00000465111 SCRIBQ14160 1630 aa25.16■■□□□ 1.62
TCEA2-209ENST00000465111 LOC105371045A0A1W2PR82 267 aa25.11■■□□□ 1.61
TCEA2-209ENST00000465111 RB1CC1Q8TDY2 1594 aa25.06■■□□□ 1.6
TCEA2-209ENST00000465111 TRIM26Q12899 539 aaPredicted RBP24.97■■□□□ 1.59
TCEA2-209ENST00000465111 RSF1Q96T23 1441 aaPredicted RBP24.84■■□□□ 1.57
TCEA2-209ENST00000465111 UNC13AQ9UPW8 1703 aa24.73■■□□□ 1.55
TCEA2-209ENST00000465111 PELP1Q8IZL8 1130 aaKnown RBP24.69■■□□□ 1.54
TCEA2-209ENST00000465111 ZEB1P37275 1124 aaPredicted RBP24.64■■□□□ 1.53
TCEA2-209ENST00000465111 TRIM41Q8WV44 630 aa24.63■■□□□ 1.53
TCEA2-209ENST00000465111 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.5
TCEA2-209ENST00000465111 BICRAQ9NZM4 1560 aa24.38■■□□□ 1.49
TCEA2-209ENST00000465111 FAM9AQ8IZU1 332 aaPredicted RBP24.37■■□□□ 1.49
TCEA2-209ENST00000465111 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
TCEA2-209ENST00000465111 SCAF1Q9H7N4 1312 aaKnown RBP24.31■■□□□ 1.48
TCEA2-209ENST00000465111 MROH2BQ7Z745 1585 aa24.27■■□□□ 1.48
TCEA2-209ENST00000465111 WIZO95785 1651 aa24.15■■□□□ 1.46
TCEA2-209ENST00000465111 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
TCEA2-209ENST00000465111 EHMT2Q96KQ7 1210 aa24.08■■□□□ 1.44
TCEA2-209ENST00000465111 EIF4G1Q04637 1599 aaKnown RBP24.06■■□□□ 1.44
TCEA2-209ENST00000465111 SMARCA4P51532 1647 aa24.02■■□□□ 1.44
TCEA2-209ENST00000465111 ACIN1Q9UKV3 1341 aaKnown RBP23.86■■□□□ 1.41
TCEA2-209ENST00000465111 TOP2AP11388 1531 aaKnown RBP23.83■■□□□ 1.41
TCEA2-209ENST00000465111 WRNQ14191 1432 aaPredicted RBP eCLIP23.82■■□□□ 1.4
TCEA2-209ENST00000465111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.81■■□□□ 1.4
TCEA2-209ENST00000465111 CCER1Q8TC90 406 aaPredicted RBP23.81■■□□□ 1.4
TCEA2-209ENST00000465111 NEUROD1Q13562 356 aa23.74■■□□□ 1.39
TCEA2-209ENST00000465111 ABCC8Q09428 1581 aa23.72■■□□□ 1.39
TCEA2-209ENST00000465111 CCDC88BA6NC98 1476 aa23.72■■□□□ 1.39
TCEA2-209ENST00000465111 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
TCEA2-209ENST00000465111 MYT1Q01538 1121 aa23.69■■□□□ 1.38
TCEA2-209ENST00000465111 CEP162Q5TB80 1403 aa23.69■■□□□ 1.38
TCEA2-209ENST00000465111 TNIKQ9UKE5 1360 aa23.65■■□□□ 1.38
TCEA2-209ENST00000465111 CENPBP07199 599 aaPredicted RBP23.64■■□□□ 1.37
TCEA2-209ENST00000465111 EEA1Q15075 1411 aa23.63■■□□□ 1.37
TCEA2-209ENST00000465111 PEG3Q9GZU2 1588 aa23.62■■□□□ 1.37
TCEA2-209ENST00000465111 GTF3C3Q9Y5Q9 886 aa23.59■■□□□ 1.37
TCEA2-209ENST00000465111 DIEXFQ68CQ4 756 aaKnown RBP23.59■■□□□ 1.37
TCEA2-209ENST00000465111 ATAD2BQ9ULI0 1458 aa23.58■■□□□ 1.37
TCEA2-209ENST00000465111 SOGA1O94964 1423 aa23.57■■□□□ 1.36
TCEA2-209ENST00000465111 CSRNP3Q8WYN3 585 aa23.5■■□□□ 1.35
TCEA2-209ENST00000465111 BAZ1BQ9UIG0 1483 aaKnown RBP23.48■■□□□ 1.35
TCEA2-209ENST00000465111 GOLGA3Q08378 1498 aa23.45■■□□□ 1.34
TCEA2-209ENST00000465111 TTBK1Q5TCY1 1321 aaPredicted RBP23.43■■□□□ 1.34
TCEA2-209ENST00000465111 RUSC2Q8N2Y8 1516 aa23.42■■□□□ 1.34
TCEA2-209ENST00000465111 UBTFP17480 764 aaKnown RBP23.4■■□□□ 1.34
TCEA2-209ENST00000465111 ZNF316A6NFI3 1004 aaPredicted RBP23.32■■□□□ 1.32
TCEA2-209ENST00000465111 CC2D2AQ9P2K1 1620 aa23.31■■□□□ 1.32
TCEA2-209ENST00000465111 NCAPD3P42695 1498 aa23.3■■□□□ 1.32
TCEA2-209ENST00000465111 HMGXB3Q12766 1538 aa23.29■■□□□ 1.32
TCEA2-209ENST00000465111 CEP164Q9UPV0 1460 aa23.28■■□□□ 1.32
TCEA2-209ENST00000465111 KIF21BO75037 1637 aa23.28■■□□□ 1.32
TCEA2-209ENST00000465111 SYNJ1O43426 1573 aa23.19■■□□□ 1.3
TCEA2-209ENST00000465111 CLIP1P30622 1438 aa23.17■■□□□ 1.3
TCEA2-209ENST00000465111 VPS8Q8N3P4 1428 aa23.14■■□□□ 1.3
TCEA2-209ENST00000465111 DNAJC5BQ9UF47 199 aa23.08■■□□□ 1.29
TCEA2-209ENST00000465111 HNRNPUL2Q1KMD3 747 aaKnown RBP23.07■■□□□ 1.28
TCEA2-209ENST00000465111 YTHDC1Q96MU7 727 aaKnown RBP23.06■■□□□ 1.28
TCEA2-209ENST00000465111 RAPGEF2Q9Y4G8 1499 aa23.01■■□□□ 1.27
TCEA2-209ENST00000465111 APLP2Q06481 763 aa22.99■■□□□ 1.27
TCEA2-209ENST00000465111 MIER1Q8N108 512 aa22.99■■□□□ 1.27
TCEA2-209ENST00000465111 TOP2BQ02880 1626 aa22.91■■□□□ 1.26
TCEA2-209ENST00000465111 CLSPNQ9HAW4 1339 aa22.88■■□□□ 1.25
TCEA2-209ENST00000465111 ERICH3Q5RHP9 1530 aa22.85■■□□□ 1.25
TCEA2-209ENST00000465111 CFTRP13569 1480 aa22.84■■□□□ 1.25
TCEA2-209ENST00000465111 BIVM-ERCC5R4GMW8 1640 aa22.83■■□□□ 1.25
TCEA2-209ENST00000465111 PRXQ9BXM0 1461 aa22.78■■□□□ 1.24
TCEA2-209ENST00000465111 PRDM2Q13029 1718 aa22.77■■□□□ 1.24
TCEA2-209ENST00000465111 DHX57Q6P158 1386 aaKnown RBP22.76■■□□□ 1.23
TCEA2-209ENST00000465111 ARAP1Q96P48 1450 aa22.76■■□□□ 1.23
TCEA2-209ENST00000465111 CADPSQ9ULU8 1353 aa22.74■■□□□ 1.23
TCEA2-209ENST00000465111 RANGAP1P46060 587 aaPredicted RBP22.74■■□□□ 1.23
TCEA2-209ENST00000465111 NESP48681 1621 aa22.7■■□□□ 1.23
TCEA2-209ENST00000465111 RRBP1Q9P2E9 1410 aaKnown RBP22.67■■□□□ 1.22
TCEA2-209ENST00000465111 CUX2O14529 1486 aa22.63■■□□□ 1.21
TCEA2-209ENST00000465111 KANK4Q5T7N3 995 aaPredicted RBP22.62■■□□□ 1.21
TCEA2-209ENST00000465111 CUX1P39880 1505 aa22.61■■□□□ 1.21
TCEA2-209ENST00000465111 KIF27Q86VH2 1401 aa22.58■■□□□ 1.21
TCEA2-209ENST00000465111 SUPT16HQ9Y5B9 1047 aaKnown RBP22.57■■□□□ 1.2
TCEA2-209ENST00000465111 FANCD2Q9BXW9 1451 aa22.56■■□□□ 1.2
TCEA2-209ENST00000465111 LAMC3Q9Y6N6 1575 aa22.53■■□□□ 1.2
TCEA2-209ENST00000465111 CCNB3Q8WWL7 1395 aa22.53■■□□□ 1.2
TCEA2-209ENST00000465111 ARHGAP35Q9NRY4 1499 aa22.5■■□□□ 1.19
TCEA2-209ENST00000465111 KIF21AQ7Z4S6 1674 aa22.42■■□□□ 1.18
TCEA2-209ENST00000465111 MAP3K1Q13233 1512 aa22.4■■□□□ 1.18
TCEA2-209ENST00000465111 TSHZ2Q9NRE2 1034 aa22.38■■□□□ 1.17
TCEA2-209ENST00000465111 FGD5Q6ZNL6 1462 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms