RNA–Protein interactions for RNA: ENST00000464753.1

MTIF3-206, Transcript of mitochondrial translational initiation factor 3, humanhuman

TSL 2

Gene MTIF3, Length 296 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTIF3-206ENST00000464753 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
MTIF3-206ENST00000464753 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
MTIF3-206ENST00000464753 NISCHQ9Y2I1 1504 aa19.4■□□□□ 0.7
MTIF3-206ENST00000464753 PHF23Q9BUL5 403 aaPredicted RBP19.18■□□□□ 0.66
MTIF3-206ENST00000464753 SENP3Q9H4L4 574 aaPredicted RBP19.14■□□□□ 0.65
MTIF3-206ENST00000464753 FOXD1Q16676 465 aa17.74■□□□□ 0.43
MTIF3-206ENST00000464753 PLPPR3Q6T4P5 718 aa17.68■□□□□ 0.42
MTIF3-206ENST00000464753 CCDC180Q9P1Z9 1646 aa17.33■□□□□ 0.37
MTIF3-206ENST00000464753 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
MTIF3-206ENST00000464753 ADRA2BP18089 450 aa16.9■□□□□ 0.3
MTIF3-206ENST00000464753 PIAS4Q8N2W9 510 aaPredicted RBP16.66■□□□□ 0.26
MTIF3-206ENST00000464753 ABCC9O60706 1549 aa16.58■□□□□ 0.24
MTIF3-206ENST00000464753 MSH5O43196 834 aa16.46■□□□□ 0.23
MTIF3-206ENST00000464753 ZCCHC6Q5VYS8 1495 aaKnown RBP16.21■□□□□ 0.19
MTIF3-206ENST00000464753 NACADO15069 1562 aa16.18■□□□□ 0.18
MTIF3-206ENST00000464753 MYO15BQ96JP2 1530 aa16.18■□□□□ 0.18
MTIF3-206ENST00000464753 RB1CC1Q8TDY2 1594 aa16.15■□□□□ 0.18
MTIF3-206ENST00000464753 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.18
MTIF3-206ENST00000464753 UNC13AQ9UPW8 1703 aa15.92■□□□□ 0.14
MTIF3-206ENST00000464753 DCAF8L2P0C7V8 631 aa15.91■□□□□ 0.14
MTIF3-206ENST00000464753 SCRIBQ14160 1630 aa15.66■□□□□ 0.1
MTIF3-206ENST00000464753 BICRAQ9NZM4 1560 aa15.65■□□□□ 0.1
MTIF3-206ENST00000464753 SHROOM4Q9ULL8 1493 aa15.58■□□□□ 0.08
MTIF3-206ENST00000464753 SCAF1Q9H7N4 1312 aaKnown RBP15.53■□□□□ 0.08
MTIF3-206ENST00000464753 PPP4R3CPQ6ZMV5 832 aa15.53■□□□□ 0.08
MTIF3-206ENST00000464753 PABPN1Q86U42 306 aaKnown RBP eCLIP15.42■□□□□ 0.06
MTIF3-206ENST00000464753 MAPK8IP2Q13387 824 aaPredicted RBP15.36■□□□□ 0.05
MTIF3-206ENST00000464753 DMRT2Q9Y5R5 561 aa15.25■□□□□ 0.03
MTIF3-206ENST00000464753 EIF4G1Q04637 1599 aaKnown RBP15.21■□□□□ 0.03
MTIF3-206ENST00000464753 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
MTIF3-206ENST00000464753 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
MTIF3-206ENST00000464753 CC2D2AQ9P2K1 1620 aa15.11■□□□□ 0.01
MTIF3-206ENST00000464753 NCBP3Q53F19 620 aaKnown RBP15.11■□□□□ 0.01
MTIF3-206ENST00000464753 SMARCA4P51532 1647 aa15.06■□□□□ 0
MTIF3-206ENST00000464753 BAZ1AQ9NRL2 1556 aaPredicted RBP15.06■□□□□ 0
MTIF3-206ENST00000464753 CECR2Q9BXF3 1484 aa15.02■□□□□ -0
MTIF3-206ENST00000464753 DNAJC5BQ9UF47 199 aa15.02■□□□□ -0
MTIF3-206ENST00000464753 KCNA4P22459 653 aa14.98□□□□□ -0.01
MTIF3-206ENST00000464753 PEG3Q9GZU2 1588 aa14.97□□□□□ -0.01
MTIF3-206ENST00000464753 SMARCA2P51531 1590 aa14.94□□□□□ -0.02
MTIF3-206ENST00000464753 RNF216Q9NWF9 866 aaPredicted RBP14.92□□□□□ -0.02
MTIF3-206ENST00000464753 MROH2BQ7Z745 1585 aa14.91□□□□□ -0.02
MTIF3-206ENST00000464753 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
MTIF3-206ENST00000464753 ATAD2BQ9ULI0 1458 aa14.89□□□□□ -0.03
MTIF3-206ENST00000464753 HMGXB3Q12766 1538 aa14.88□□□□□ -0.03
MTIF3-206ENST00000464753 NCAPD3P42695 1498 aa14.88□□□□□ -0.03
MTIF3-206ENST00000464753 NPM3O75607 178 aaKnown RBP14.87□□□□□ -0.03
MTIF3-206ENST00000464753 WIZO95785 1651 aa14.81□□□□□ -0.04
MTIF3-206ENST00000464753 RSF1Q96T23 1441 aaPredicted RBP14.78□□□□□ -0.04
MTIF3-206ENST00000464753 BAZ1BQ9UIG0 1483 aaKnown RBP14.76□□□□□ -0.05
MTIF3-206ENST00000464753 TOP2AP11388 1531 aaKnown RBP14.66□□□□□ -0.06
MTIF3-206ENST00000464753 LAMC3Q9Y6N6 1575 aa14.52□□□□□ -0.08
MTIF3-206ENST00000464753 PRDM2Q13029 1718 aa14.52□□□□□ -0.09
MTIF3-206ENST00000464753 DCAF8L1A6NGE4 600 aa14.46□□□□□ -0.09
MTIF3-206ENST00000464753 CCDC88BA6NC98 1476 aa14.43□□□□□ -0.1
MTIF3-206ENST00000464753 CADPSQ9ULU8 1353 aa14.41□□□□□ -0.1
MTIF3-206ENST00000464753 NESP48681 1621 aa14.4□□□□□ -0.1
MTIF3-206ENST00000464753 CFTRP13569 1480 aa14.39□□□□□ -0.11
MTIF3-206ENST00000464753 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
MTIF3-206ENST00000464753 SUPT5HO00267 1087 aaKnown RBP14.36□□□□□ -0.11
MTIF3-206ENST00000464753 PDS5BQ9NTI5 1447 aa14.33□□□□□ -0.11
MTIF3-206ENST00000464753 ERCC6Q03468 1493 aa14.3□□□□□ -0.12
MTIF3-206ENST00000464753 THOC2Q8NI27 1593 aaKnown RBP14.28□□□□□ -0.12
MTIF3-206ENST00000464753 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
MTIF3-206ENST00000464753 SLC4A1APQ9BWU0 796 aaKnown RBP14.24□□□□□ -0.13
MTIF3-206ENST00000464753 CEP164Q9UPV0 1460 aa14.24□□□□□ -0.13
MTIF3-206ENST00000464753 WDR62O43379 1518 aa14.19□□□□□ -0.14
MTIF3-206ENST00000464753 CUX2O14529 1486 aa14.18□□□□□ -0.14
MTIF3-206ENST00000464753 MRC2Q9UBG0 1479 aa14.18□□□□□ -0.14
MTIF3-206ENST00000464753 ABCC8Q09428 1581 aa14.12□□□□□ -0.15
MTIF3-206ENST00000464753 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.11□□□□□ -0.15
MTIF3-206ENST00000464753 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
MTIF3-206ENST00000464753 DNMBPQ6XZF7 1577 aa14.1□□□□□ -0.15
MTIF3-206ENST00000464753 SLC4A2P04920 1241 aa14.08□□□□□ -0.16
MTIF3-206ENST00000464753 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
MTIF3-206ENST00000464753 TOPBP1Q92547 1522 aa14.06□□□□□ -0.16
MTIF3-206ENST00000464753 BIVM-ERCC5R4GMW8 1640 aa14.02□□□□□ -0.16
MTIF3-206ENST00000464753 CUX1P39880 1505 aa14□□□□□ -0.17
MTIF3-206ENST00000464753 TOP2BQ02880 1626 aa13.98□□□□□ -0.17
MTIF3-206ENST00000464753 TARBP1Q13395 1621 aaKnown RBP13.95□□□□□ -0.18
MTIF3-206ENST00000464753 POLA1P09884 1462 aaPredicted RBP13.94□□□□□ -0.18
MTIF3-206ENST00000464753 WDR97A6NE52 1622 aa13.94□□□□□ -0.18
MTIF3-206ENST00000464753 WRNQ14191 1432 aaPredicted RBP eCLIP13.94□□□□□ -0.18
MTIF3-206ENST00000464753 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
MTIF3-206ENST00000464753 SYNJ1O43426 1573 aa13.93□□□□□ -0.18
MTIF3-206ENST00000464753 C1QBPQ07021 282 aaKnown RBP13.93□□□□□ -0.18
MTIF3-206ENST00000464753 FGD5Q6ZNL6 1462 aa13.92□□□□□ -0.18
MTIF3-206ENST00000464753 U3KPZ7 1027 aaPredicted RBP13.9□□□□□ -0.18
MTIF3-206ENST00000464753 FOXD4L1Q9NU39 408 aa13.86□□□□□ -0.19
MTIF3-206ENST00000464753 EIF4G3O43432 1585 aaKnown RBP13.86□□□□□ -0.19
MTIF3-206ENST00000464753 SOGA1O94964 1423 aa13.84□□□□□ -0.19
MTIF3-206ENST00000464753 ABCA10Q8WWZ4 1543 aa13.83□□□□□ -0.2
MTIF3-206ENST00000464753 RAD54L2Q9Y4B4 1467 aa13.82□□□□□ -0.2
MTIF3-206ENST00000464753 ABCA5Q8WWZ7 1642 aa13.81□□□□□ -0.2
MTIF3-206ENST00000464753 PBRM1Q86U86 1689 aa13.81□□□□□ -0.2
MTIF3-206ENST00000464753 ZNF608Q9ULD9 1512 aaPredicted RBP13.8□□□□□ -0.2
MTIF3-206ENST00000464753 ZBTB22O15209 634 aa13.79□□□□□ -0.2
MTIF3-206ENST00000464753 MYCNP04198 464 aaPredicted RBP13.76□□□□□ -0.21
MTIF3-206ENST00000464753 CACNB1Q02641 598 aaPredicted RBP13.76□□□□□ -0.21
MTIF3-206ENST00000464753 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms