RNA–Protein interactions for RNA: ENST00000461292.3

GRIN2A-203, Transcript of glutamate ionotropic receptor NMDA type subunit 2A, humanhuman

TSL 2

Gene GRIN2A, Length 4,165 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2A-203ENST00000461292 NISCHQ9Y2I1 1504 aa13.67□□□□□ -0.22
GRIN2A-203ENST00000461292 DCAF8L2P0C7V8 631 aa12.49□□□□□ -0.41
GRIN2A-203ENST00000461292 SHROOM4Q9ULL8 1493 aa12.04□□□□□ -0.48
GRIN2A-203ENST00000461292 ABCC9O60706 1549 aa11.84□□□□□ -0.51
GRIN2A-203ENST00000461292 SUPT5HO00267 1087 aaKnown RBP11.75□□□□□ -0.53
GRIN2A-203ENST00000461292 CCDC180Q9P1Z9 1646 aa11.69□□□□□ -0.54
GRIN2A-203ENST00000461292 ZCCHC6Q5VYS8 1495 aaKnown RBP11.39□□□□□ -0.59
GRIN2A-203ENST00000461292 PABPN1Q86U42 306 aaKnown RBP eCLIP11.35□□□□□ -0.59
GRIN2A-203ENST00000461292 SCRIBQ14160 1630 aa11.2□□□□□ -0.62
GRIN2A-203ENST00000461292 RB1CC1Q8TDY2 1594 aa11.14□□□□□ -0.63
GRIN2A-203ENST00000461292 NACADO15069 1562 aa11.1□□□□□ -0.63
GRIN2A-203ENST00000461292 EHMT2Q96KQ7 1210 aa11.09□□□□□ -0.63
GRIN2A-203ENST00000461292 DCAF1Q9Y4B6 1507 aa11.01□□□□□ -0.65
GRIN2A-203ENST00000461292 FAM9AQ8IZU1 332 aaPredicted RBP10.98□□□□□ -0.65
GRIN2A-203ENST00000461292 TRIM41Q8WV44 630 aa10.87□□□□□ -0.67
GRIN2A-203ENST00000461292 MYO15BQ96JP2 1530 aa10.87□□□□□ -0.67
GRIN2A-203ENST00000461292 CHIC1Q5VXU3 224 aa10.85□□□□□ -0.67
GRIN2A-203ENST00000461292 CECR2Q9BXF3 1484 aa10.83□□□□□ -0.68
GRIN2A-203ENST00000461292 RSF1Q96T23 1441 aaPredicted RBP10.78□□□□□ -0.68
GRIN2A-203ENST00000461292 LOC105371045A0A1W2PR82 267 aa10.7□□□□□ -0.7
GRIN2A-203ENST00000461292 RANGAP1P46060 587 aaPredicted RBP10.68□□□□□ -0.7
GRIN2A-203ENST00000461292 MROH2BQ7Z745 1585 aa10.66□□□□□ -0.7
GRIN2A-203ENST00000461292 UNC13AQ9UPW8 1703 aa10.63□□□□□ -0.71
GRIN2A-203ENST00000461292 BICRAQ9NZM4 1560 aa10.62□□□□□ -0.71
GRIN2A-203ENST00000461292 BAZ1AQ9NRL2 1556 aaPredicted RBP10.59□□□□□ -0.71
GRIN2A-203ENST00000461292 TTBK1Q5TCY1 1321 aaPredicted RBP10.59□□□□□ -0.71
GRIN2A-203ENST00000461292 UBTFP17480 764 aaKnown RBP10.56□□□□□ -0.72
GRIN2A-203ENST00000461292 BAZ1BQ9UIG0 1483 aaKnown RBP10.54□□□□□ -0.72
GRIN2A-203ENST00000461292 WIZO95785 1651 aa10.53□□□□□ -0.72
GRIN2A-203ENST00000461292 DNAJC5BQ9UF47 199 aa10.51□□□□□ -0.73
GRIN2A-203ENST00000461292 PPARGC1BQ86YN6 1023 aaKnown RBP10.5□□□□□ -0.73
GRIN2A-203ENST00000461292 PCGF6Q9BYE7 350 aa10.5□□□□□ -0.73
GRIN2A-203ENST00000461292 SMARCA4P51532 1647 aa10.49□□□□□ -0.73
GRIN2A-203ENST00000461292 EIF4G1Q04637 1599 aaKnown RBP10.48□□□□□ -0.73
GRIN2A-203ENST00000461292 PELP1Q8IZL8 1130 aaKnown RBP10.48□□□□□ -0.73
GRIN2A-203ENST00000461292 ATAD2BQ9ULI0 1458 aa10.46□□□□□ -0.74
GRIN2A-203ENST00000461292 CCDC88BA6NC98 1476 aa10.42□□□□□ -0.74
GRIN2A-203ENST00000461292 SMARCA2P51531 1590 aa10.41□□□□□ -0.74
GRIN2A-203ENST00000461292 CC2D2AQ9P2K1 1620 aa10.39□□□□□ -0.75
GRIN2A-203ENST00000461292 ATP1B4Q9UN42 357 aaPredicted RBP10.38□□□□□ -0.75
GRIN2A-203ENST00000461292 APLP2Q06481 763 aa10.36□□□□□ -0.75
GRIN2A-203ENST00000461292 TOP2AP11388 1531 aaKnown RBP10.34□□□□□ -0.75
GRIN2A-203ENST00000461292 CSRNP3Q8WYN3 585 aa10.33□□□□□ -0.76
GRIN2A-203ENST00000461292 ABCC8Q09428 1581 aa10.3□□□□□ -0.76
GRIN2A-203ENST00000461292 NCAPD3P42695 1498 aa10.3□□□□□ -0.76
GRIN2A-203ENST00000461292 WRNQ14191 1432 aaPredicted RBP eCLIP10.28□□□□□ -0.76
GRIN2A-203ENST00000461292 ERCC6Q03468 1493 aa10.25□□□□□ -0.77
GRIN2A-203ENST00000461292 HRCP23327 699 aa10.25□□□□□ -0.77
GRIN2A-203ENST00000461292 FBLN2P98095 1184 aa10.24□□□□□ -0.77
GRIN2A-203ENST00000461292 NESP48681 1621 aa10.23□□□□□ -0.77
GRIN2A-203ENST00000461292 CADPSQ9ULU8 1353 aa10.22□□□□□ -0.77
GRIN2A-203ENST00000461292 MYT1Q01538 1121 aa10.22□□□□□ -0.77
GRIN2A-203ENST00000461292 SOGA1O94964 1423 aa10.22□□□□□ -0.77
GRIN2A-203ENST00000461292 P3H3Q8IVL6 736 aa10.22□□□□□ -0.77
GRIN2A-203ENST00000461292 HMGXB3Q12766 1538 aa10.17□□□□□ -0.78
GRIN2A-203ENST00000461292 PDS5BQ9NTI5 1447 aa10.14□□□□□ -0.79
GRIN2A-203ENST00000461292 PEG3Q9GZU2 1588 aa10.12□□□□□ -0.79
GRIN2A-203ENST00000461292 FANCD2Q9BXW9 1451 aa10.12□□□□□ -0.79
GRIN2A-203ENST00000461292 ARID3CA6NKF2 412 aa10.12□□□□□ -0.79
GRIN2A-203ENST00000461292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.12□□□□□ -0.79
GRIN2A-203ENST00000461292 TRIM26Q12899 539 aaPredicted RBP10.12□□□□□ -0.79
GRIN2A-203ENST00000461292 HNRNPUL2Q1KMD3 747 aaKnown RBP10.12□□□□□ -0.79
GRIN2A-203ENST00000461292 RUSC2Q8N2Y8 1516 aa10.12□□□□□ -0.79
GRIN2A-203ENST00000461292 ITGAEP38570 1179 aa10.11□□□□□ -0.79
GRIN2A-203ENST00000461292 CEP164Q9UPV0 1460 aa10.08□□□□□ -0.8
GRIN2A-203ENST00000461292 TDRD9Q8NDG6 1382 aaKnown RBP10.07□□□□□ -0.8
GRIN2A-203ENST00000461292 CUX2O14529 1486 aa10.07□□□□□ -0.8
GRIN2A-203ENST00000461292 CFTRP13569 1480 aa10.07□□□□□ -0.8
GRIN2A-203ENST00000461292 KIF27Q86VH2 1401 aa10.06□□□□□ -0.8
GRIN2A-203ENST00000461292 CCER1Q8TC90 406 aaPredicted RBP10.03□□□□□ -0.8
GRIN2A-203ENST00000461292 EEA1Q15075 1411 aa10.01□□□□□ -0.81
GRIN2A-203ENST00000461292 CHMP7Q8WUX9 453 aaPredicted RBP10.01□□□□□ -0.81
GRIN2A-203ENST00000461292 CEP162Q5TB80 1403 aa10□□□□□ -0.81
GRIN2A-203ENST00000461292 GOLGA3Q08378 1498 aa10□□□□□ -0.81
GRIN2A-203ENST00000461292 CLIP1P30622 1438 aa9.99□□□□□ -0.81
GRIN2A-203ENST00000461292 RAD54L2Q9Y4B4 1467 aa9.99□□□□□ -0.81
GRIN2A-203ENST00000461292 SYNJ1O43426 1573 aa9.98□□□□□ -0.81
GRIN2A-203ENST00000461292 CARMIL1Q5VZK9 1371 aa9.98□□□□□ -0.81
GRIN2A-203ENST00000461292 FGD5Q6ZNL6 1462 aa9.96□□□□□ -0.81
GRIN2A-203ENST00000461292 TNIKQ9UKE5 1360 aa9.96□□□□□ -0.82
GRIN2A-203ENST00000461292 FAM50AQ14320 339 aaKnown RBP9.94□□□□□ -0.82
GRIN2A-203ENST00000461292 LAMC3Q9Y6N6 1575 aa9.94□□□□□ -0.82
GRIN2A-203ENST00000461292 RAPGEF2Q9Y4G8 1499 aa9.94□□□□□ -0.82
GRIN2A-203ENST00000461292 YTHDC1Q96MU7 727 aaKnown RBP9.93□□□□□ -0.82
GRIN2A-203ENST00000461292 CUX1P39880 1505 aa9.92□□□□□ -0.82
GRIN2A-203ENST00000461292 TOPBP1Q92547 1522 aa9.91□□□□□ -0.82
GRIN2A-203ENST00000461292 AQRO60306 1485 aaKnown RBP eCLIP9.91□□□□□ -0.82
GRIN2A-203ENST00000461292 MRC2Q9UBG0 1479 aa9.9□□□□□ -0.82
GRIN2A-203ENST00000461292 IGF1RP08069 1367 aa9.89□□□□□ -0.83
GRIN2A-203ENST00000461292 URB2Q14146 1524 aaKnown RBP9.88□□□□□ -0.83
GRIN2A-203ENST00000461292 POLA1P09884 1462 aaPredicted RBP9.88□□□□□ -0.83
GRIN2A-203ENST00000461292 CENPBP07199 599 aaPredicted RBP9.86□□□□□ -0.83
GRIN2A-203ENST00000461292 KIF21AQ7Z4S6 1674 aa9.85□□□□□ -0.83
GRIN2A-203ENST00000461292 ZEB1P37275 1124 aaPredicted RBP9.84□□□□□ -0.83
GRIN2A-203ENST00000461292 TOP2BQ02880 1626 aa9.83□□□□□ -0.84
GRIN2A-203ENST00000461292 DNMBPQ6XZF7 1577 aa9.83□□□□□ -0.84
GRIN2A-203ENST00000461292 GAPVD1Q14C86 1478 aa9.82□□□□□ -0.84
GRIN2A-203ENST00000461292 MYT1LQ9UL68 1186 aa9.81□□□□□ -0.84
GRIN2A-203ENST00000461292 ZNF777Q9ULD5 760 aaPredicted RBP9.81□□□□□ -0.84
GRIN2A-203ENST00000461292 SCAF1Q9H7N4 1312 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms