RNA–Protein interactions for RNA: ENST00000458291.6

CAGE1-205, Transcript of cancer antigen 1, humanhuman

TSL 1 (best)

Gene CAGE1, Length 2,989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-205ENST00000458291 NISCHQ9Y2I1 1504 aa12.03□□□□□ -0.48
CAGE1-205ENST00000458291 ABCC9O60706 1549 aa10.79□□□□□ -0.68
CAGE1-205ENST00000458291 CCDC180Q9P1Z9 1646 aa10.6□□□□□ -0.71
CAGE1-205ENST00000458291 DCAF8L2P0C7V8 631 aa10.46□□□□□ -0.74
CAGE1-205ENST00000458291 ZCCHC6Q5VYS8 1495 aaKnown RBP10.18□□□□□ -0.78
CAGE1-205ENST00000458291 RB1CC1Q8TDY2 1594 aa10.18□□□□□ -0.78
CAGE1-205ENST00000458291 PABPN1Q86U42 306 aaKnown RBP eCLIP10.15□□□□□ -0.78
CAGE1-205ENST00000458291 NACADO15069 1562 aa10.1□□□□□ -0.79
CAGE1-205ENST00000458291 DNAJC5BQ9UF47 199 aa10.09□□□□□ -0.79
CAGE1-205ENST00000458291 SHROOM4Q9ULL8 1493 aa10.08□□□□□ -0.8
CAGE1-205ENST00000458291 DCAF1Q9Y4B6 1507 aa9.97□□□□□ -0.81
CAGE1-205ENST00000458291 HRCP23327 699 aa9.95□□□□□ -0.82
CAGE1-205ENST00000458291 SUPT5HO00267 1087 aaKnown RBP9.95□□□□□ -0.82
CAGE1-205ENST00000458291 MYO15BQ96JP2 1530 aa9.91□□□□□ -0.82
CAGE1-205ENST00000458291 UNC13AQ9UPW8 1703 aa9.82□□□□□ -0.84
CAGE1-205ENST00000458291 BICRAQ9NZM4 1560 aa9.82□□□□□ -0.84
CAGE1-205ENST00000458291 SCRIBQ14160 1630 aa9.81□□□□□ -0.84
CAGE1-205ENST00000458291 CHIC1Q5VXU3 224 aa9.74□□□□□ -0.85
CAGE1-205ENST00000458291 PPARGC1BQ86YN6 1023 aaKnown RBP9.72□□□□□ -0.85
CAGE1-205ENST00000458291 PCGF6Q9BYE7 350 aa9.72□□□□□ -0.85
CAGE1-205ENST00000458291 CECR2Q9BXF3 1484 aa9.69□□□□□ -0.86
CAGE1-205ENST00000458291 CC2D2AQ9P2K1 1620 aa9.64□□□□□ -0.87
CAGE1-205ENST00000458291 EIF4G1Q04637 1599 aaKnown RBP9.63□□□□□ -0.87
CAGE1-205ENST00000458291 PELP1Q8IZL8 1130 aaKnown RBP9.52□□□□□ -0.88
CAGE1-205ENST00000458291 RSF1Q96T23 1441 aaPredicted RBP9.49□□□□□ -0.89
CAGE1-205ENST00000458291 TRIM26Q12899 539 aaPredicted RBP9.45□□□□□ -0.9
CAGE1-205ENST00000458291 LOC105371045A0A1W2PR82 267 aa9.43□□□□□ -0.9
CAGE1-205ENST00000458291 SCAF1Q9H7N4 1312 aaKnown RBP9.39□□□□□ -0.91
CAGE1-205ENST00000458291 NCAPD3P42695 1498 aa9.37□□□□□ -0.91
CAGE1-205ENST00000458291 ATAD2BQ9ULI0 1458 aa9.36□□□□□ -0.91
CAGE1-205ENST00000458291 TRIM41Q8WV44 630 aa9.36□□□□□ -0.91
CAGE1-205ENST00000458291 ZEB1P37275 1124 aaPredicted RBP9.35□□□□□ -0.91
CAGE1-205ENST00000458291 ERCC6Q03468 1493 aa9.34□□□□□ -0.91
CAGE1-205ENST00000458291 SMARCA2P51531 1590 aa9.31□□□□□ -0.92
CAGE1-205ENST00000458291 BAZ1BQ9UIG0 1483 aaKnown RBP9.3□□□□□ -0.92
CAGE1-205ENST00000458291 BAZ1AQ9NRL2 1556 aaPredicted RBP9.3□□□□□ -0.92
CAGE1-205ENST00000458291 SMARCA4P51532 1647 aa9.3□□□□□ -0.92
CAGE1-205ENST00000458291 MROH2BQ7Z745 1585 aa9.28□□□□□ -0.92
CAGE1-205ENST00000458291 NESP48681 1621 aa9.25□□□□□ -0.93
CAGE1-205ENST00000458291 DNAJC5Q9H3Z4 198 aa9.24□□□□□ -0.93
CAGE1-205ENST00000458291 HMGXB3Q12766 1538 aa9.23□□□□□ -0.93
CAGE1-205ENST00000458291 WIZO95785 1651 aa9.22□□□□□ -0.93
CAGE1-205ENST00000458291 CUX2O14529 1486 aa9.17□□□□□ -0.94
CAGE1-205ENST00000458291 PDS5BQ9NTI5 1447 aa9.17□□□□□ -0.94
CAGE1-205ENST00000458291 TOP2AP11388 1531 aaKnown RBP9.17□□□□□ -0.94
CAGE1-205ENST00000458291 ACIN1Q9UKV3 1341 aaKnown RBP9.16□□□□□ -0.94
CAGE1-205ENST00000458291 CADPSQ9ULU8 1353 aa9.15□□□□□ -0.94
CAGE1-205ENST00000458291 PEG3Q9GZU2 1588 aa9.15□□□□□ -0.94
CAGE1-205ENST00000458291 FAM9AQ8IZU1 332 aaPredicted RBP9.15□□□□□ -0.95
CAGE1-205ENST00000458291 MYT1Q01538 1121 aa9.14□□□□□ -0.95
CAGE1-205ENST00000458291 NEUROD1Q13562 356 aa9.13□□□□□ -0.95
CAGE1-205ENST00000458291 LAMC3Q9Y6N6 1575 aa9.11□□□□□ -0.95
CAGE1-205ENST00000458291 EEA1Q15075 1411 aa9.08□□□□□ -0.96
CAGE1-205ENST00000458291 CCDC88BA6NC98 1476 aa9.07□□□□□ -0.96
CAGE1-205ENST00000458291 GTF3C3Q9Y5Q9 886 aa9.06□□□□□ -0.96
CAGE1-205ENST00000458291 WRNQ14191 1432 aaPredicted RBP eCLIP9.03□□□□□ -0.96
CAGE1-205ENST00000458291 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.03□□□□□ -0.96
CAGE1-205ENST00000458291 FANCD2Q9BXW9 1451 aa9.02□□□□□ -0.96
CAGE1-205ENST00000458291 CENPBP07199 599 aaPredicted RBP9.02□□□□□ -0.97
CAGE1-205ENST00000458291 CEP164Q9UPV0 1460 aa9.02□□□□□ -0.97
CAGE1-205ENST00000458291 MRC2Q9UBG0 1479 aa9.02□□□□□ -0.97
CAGE1-205ENST00000458291 KIF21AQ7Z4S6 1674 aa9.01□□□□□ -0.97
CAGE1-205ENST00000458291 DIEXFQ68CQ4 756 aaKnown RBP9.01□□□□□ -0.97
CAGE1-205ENST00000458291 THOC2Q8NI27 1593 aaKnown RBP9□□□□□ -0.97
CAGE1-205ENST00000458291 TNIKQ9UKE5 1360 aa9□□□□□ -0.97
CAGE1-205ENST00000458291 CCER1Q8TC90 406 aaPredicted RBP9□□□□□ -0.97
CAGE1-205ENST00000458291 CFTRP13569 1480 aa8.99□□□□□ -0.97
CAGE1-205ENST00000458291 ABCC8Q09428 1581 aa8.99□□□□□ -0.97
CAGE1-205ENST00000458291 EHMT2Q96KQ7 1210 aa8.99□□□□□ -0.97
CAGE1-205ENST00000458291 CEP162Q5TB80 1403 aa8.96□□□□□ -0.97
CAGE1-205ENST00000458291 CSRNP3Q8WYN3 585 aa8.96□□□□□ -0.97
CAGE1-205ENST00000458291 OSCARQ8IYS5 282 aa8.95□□□□□ -0.98
CAGE1-205ENST00000458291 GOLGA3Q08378 1498 aa8.94□□□□□ -0.98
CAGE1-205ENST00000458291 SOGA1O94964 1423 aa8.93□□□□□ -0.98
CAGE1-205ENST00000458291 WDR62O43379 1518 aa8.92□□□□□ -0.98
CAGE1-205ENST00000458291 FBLN2P98095 1184 aa8.91□□□□□ -0.98
CAGE1-205ENST00000458291 URB2Q14146 1524 aaKnown RBP8.9□□□□□ -0.99
CAGE1-205ENST00000458291 UBTFP17480 764 aaKnown RBP8.89□□□□□ -0.99
CAGE1-205ENST00000458291 KIF21BO75037 1637 aa8.89□□□□□ -0.99
CAGE1-205ENST00000458291 ZNF316A6NFI3 1004 aaPredicted RBP8.85□□□□□ -0.99
CAGE1-205ENST00000458291 RUSC2Q8N2Y8 1516 aa8.84□□□□□ -0.99
CAGE1-205ENST00000458291 SYNJ1O43426 1573 aa8.84□□□□□ -0.99
CAGE1-205ENST00000458291 TOPBP1Q92547 1522 aa8.83□□□□□ -1
CAGE1-205ENST00000458291 ZNF608Q9ULD9 1512 aaPredicted RBP8.83□□□□□ -1
CAGE1-205ENST00000458291 YTHDC1Q96MU7 727 aaKnown RBP8.82□□□□□ -1
CAGE1-205ENST00000458291 IFT140Q96RY7 1462 aa8.82□□□□□ -1
CAGE1-205ENST00000458291 CLIP1P30622 1438 aa8.81□□□□□ -1
CAGE1-205ENST00000458291 TDRD9Q8NDG6 1382 aaKnown RBP8.8□□□□□ -1
CAGE1-205ENST00000458291 AQRO60306 1485 aaKnown RBP eCLIP8.8□□□□□ -1
CAGE1-205ENST00000458291 TOP2BQ02880 1626 aa8.8□□□□□ -1
CAGE1-205ENST00000458291 VPS8Q8N3P4 1428 aa8.8□□□□□ -1
CAGE1-205ENST00000458291 APLP2Q06481 763 aa8.79□□□□□ -1
CAGE1-205ENST00000458291 CYB5RLQ6IPT4 315 aa8.79□□□□□ -1
CAGE1-205ENST00000458291 TTBK1Q5TCY1 1321 aaPredicted RBP8.79□□□□□ -1
CAGE1-205ENST00000458291 CHMP7Q8WUX9 453 aaPredicted RBP8.79□□□□□ -1
CAGE1-205ENST00000458291 MIER1Q8N108 512 aa8.78□□□□□ -1
CAGE1-205ENST00000458291 BIVM-ERCC5R4GMW8 1640 aa8.77□□□□□ -1.01
CAGE1-205ENST00000458291 ERICH3Q5RHP9 1530 aa8.77□□□□□ -1.01
CAGE1-205ENST00000458291 RAD54L2Q9Y4B4 1467 aa8.76□□□□□ -1.01
CAGE1-205ENST00000458291 DNMBPQ6XZF7 1577 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms