RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 AEBP2Q6ZN18 517 aaPredicted RBP23.55■■□□□ 1.36
CDC42EP3-204ENST00000457889 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
CDC42EP3-204ENST00000457889 NISCHQ9Y2I1 1504 aa20.49■□□□□ 0.87
CDC42EP3-204ENST00000457889 SENP3Q9H4L4 574 aaPredicted RBP19.93■□□□□ 0.78
CDC42EP3-204ENST00000457889 PHF23Q9BUL5 403 aaPredicted RBP19.76■□□□□ 0.75
CDC42EP3-204ENST00000457889 FOXD1Q16676 465 aa18.73■□□□□ 0.59
CDC42EP3-204ENST00000457889 CCDC180Q9P1Z9 1646 aa18.01■□□□□ 0.47
CDC42EP3-204ENST00000457889 POTEDQ86YR6 584 aa17.5■□□□□ 0.39
CDC42EP3-204ENST00000457889 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
CDC42EP3-204ENST00000457889 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.39
CDC42EP3-204ENST00000457889 MSH5O43196 834 aa17.44■□□□□ 0.38
CDC42EP3-204ENST00000457889 PIAS4Q8N2W9 510 aaPredicted RBP17.42■□□□□ 0.38
CDC42EP3-204ENST00000457889 ADRA2BP18089 450 aa17.38■□□□□ 0.37
CDC42EP3-204ENST00000457889 ZCCHC6Q5VYS8 1495 aaKnown RBP17.21■□□□□ 0.35
CDC42EP3-204ENST00000457889 DCAF1Q9Y4B6 1507 aa17.07■□□□□ 0.32
CDC42EP3-204ENST00000457889 MYO15BQ96JP2 1530 aa16.96■□□□□ 0.3
CDC42EP3-204ENST00000457889 ABCC9O60706 1549 aa16.94■□□□□ 0.3
CDC42EP3-204ENST00000457889 NACADO15069 1562 aa16.8■□□□□ 0.28
CDC42EP3-204ENST00000457889 DCAF8L2P0C7V8 631 aa16.75■□□□□ 0.27
CDC42EP3-204ENST00000457889 RB1CC1Q8TDY2 1594 aa16.66■□□□□ 0.26
CDC42EP3-204ENST00000457889 SHROOM4Q9ULL8 1493 aa16.41■□□□□ 0.22
CDC42EP3-204ENST00000457889 SCRIBQ14160 1630 aa16.38■□□□□ 0.21
CDC42EP3-204ENST00000457889 UNC13AQ9UPW8 1703 aa16.19■□□□□ 0.18
CDC42EP3-204ENST00000457889 BICRAQ9NZM4 1560 aa16.07■□□□□ 0.16
CDC42EP3-204ENST00000457889 MAPK8IP2Q13387 824 aaPredicted RBP16.06■□□□□ 0.16
CDC42EP3-204ENST00000457889 PABPN1Q86U42 306 aaKnown RBP eCLIP15.89■□□□□ 0.13
CDC42EP3-204ENST00000457889 BAZ1AQ9NRL2 1556 aaPredicted RBP15.88■□□□□ 0.13
CDC42EP3-204ENST00000457889 CECR2Q9BXF3 1484 aa15.82■□□□□ 0.12
CDC42EP3-204ENST00000457889 RSF1Q96T23 1441 aaPredicted RBP15.81■□□□□ 0.12
CDC42EP3-204ENST00000457889 DMRT2Q9Y5R5 561 aa15.8■□□□□ 0.12
CDC42EP3-204ENST00000457889 SMARCA4P51532 1647 aa15.77■□□□□ 0.12
CDC42EP3-204ENST00000457889 MROH2BQ7Z745 1585 aa15.75■□□□□ 0.11
CDC42EP3-204ENST00000457889 SUPT5HO00267 1087 aaKnown RBP15.75■□□□□ 0.11
CDC42EP3-204ENST00000457889 SCAF1Q9H7N4 1312 aaKnown RBP15.67■□□□□ 0.1
CDC42EP3-204ENST00000457889 PEG3Q9GZU2 1588 aa15.66■□□□□ 0.1
CDC42EP3-204ENST00000457889 EIF4G1Q04637 1599 aaKnown RBP15.62■□□□□ 0.09
CDC42EP3-204ENST00000457889 SMARCA2P51531 1590 aa15.6■□□□□ 0.09
CDC42EP3-204ENST00000457889 WIZO95785 1651 aa15.59■□□□□ 0.09
CDC42EP3-204ENST00000457889 TOP2AP11388 1531 aaKnown RBP15.54■□□□□ 0.08
CDC42EP3-204ENST00000457889 ATAD2BQ9ULI0 1458 aa15.53■□□□□ 0.08
CDC42EP3-204ENST00000457889 HMGXB3Q12766 1538 aa15.48■□□□□ 0.07
CDC42EP3-204ENST00000457889 NCAPD3P42695 1498 aa15.47■□□□□ 0.07
CDC42EP3-204ENST00000457889 BAZ1BQ9UIG0 1483 aaKnown RBP15.46■□□□□ 0.06
CDC42EP3-204ENST00000457889 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
CDC42EP3-204ENST00000457889 PPP4R3CPQ6ZMV5 832 aa15.37■□□□□ 0.05
CDC42EP3-204ENST00000457889 CCDC88BA6NC98 1476 aa15.31■□□□□ 0.04
CDC42EP3-204ENST00000457889 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
CDC42EP3-204ENST00000457889 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
CDC42EP3-204ENST00000457889 HOXD11P31277 338 aaPredicted RBP15.13■□□□□ 0.01
CDC42EP3-204ENST00000457889 CFTRP13569 1480 aa15.08■□□□□ 0.01
CDC42EP3-204ENST00000457889 CNKSR2Q8WXI2 1034 aa15.06■□□□□ 0
CDC42EP3-204ENST00000457889 CADPSQ9ULU8 1353 aa15.04■□□□□ -0
CDC42EP3-204ENST00000457889 PRDM2Q13029 1718 aa15.01□□□□□ -0.01
CDC42EP3-204ENST00000457889 LAMC3Q9Y6N6 1575 aa14.98□□□□□ -0.01
CDC42EP3-204ENST00000457889 RNF216Q9NWF9 866 aaPredicted RBP14.96□□□□□ -0.01
CDC42EP3-204ENST00000457889 RNF39Q9H2S5 420 aa14.95□□□□□ -0.02
CDC42EP3-204ENST00000457889 DNAJC5BQ9UF47 199 aa14.95□□□□□ -0.02
CDC42EP3-204ENST00000457889 TRIM41Q8WV44 630 aa14.92□□□□□ -0.02
CDC42EP3-204ENST00000457889 WRNQ14191 1432 aaPredicted RBP eCLIP14.92□□□□□ -0.02
CDC42EP3-204ENST00000457889 ABCC8Q09428 1581 aa14.88□□□□□ -0.03
CDC42EP3-204ENST00000457889 PDS5BQ9NTI5 1447 aa14.86□□□□□ -0.03
CDC42EP3-204ENST00000457889 FANCD2Q9BXW9 1451 aa14.85□□□□□ -0.03
CDC42EP3-204ENST00000457889 TOP2BQ02880 1626 aa14.83□□□□□ -0.04
CDC42EP3-204ENST00000457889 NESP48681 1621 aa14.81□□□□□ -0.04
CDC42EP3-204ENST00000457889 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
CDC42EP3-204ENST00000457889 CEP164Q9UPV0 1460 aa14.8□□□□□ -0.04
CDC42EP3-204ENST00000457889 SYNJ1O43426 1573 aa14.8□□□□□ -0.04
CDC42EP3-204ENST00000457889 CUX1P39880 1505 aa14.76□□□□□ -0.05
CDC42EP3-204ENST00000457889 EEA1Q15075 1411 aa14.75□□□□□ -0.05
CDC42EP3-204ENST00000457889 DNMBPQ6XZF7 1577 aa14.73□□□□□ -0.05
CDC42EP3-204ENST00000457889 KIF21AQ7Z4S6 1674 aa14.68□□□□□ -0.06
CDC42EP3-204ENST00000457889 TOPBP1Q92547 1522 aa14.67□□□□□ -0.06
CDC42EP3-204ENST00000457889 MRC2Q9UBG0 1479 aa14.66□□□□□ -0.06
CDC42EP3-204ENST00000457889 C1QBPQ07021 282 aaKnown RBP14.65□□□□□ -0.06
CDC42EP3-204ENST00000457889 URB2Q14146 1524 aaKnown RBP14.64□□□□□ -0.07
CDC42EP3-204ENST00000457889 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
CDC42EP3-204ENST00000457889 ERCC6Q03468 1493 aa14.62□□□□□ -0.07
CDC42EP3-204ENST00000457889 NCBP3Q53F19 620 aaKnown RBP14.61□□□□□ -0.07
CDC42EP3-204ENST00000457889 WDR62O43379 1518 aa14.6□□□□□ -0.07
CDC42EP3-204ENST00000457889 SOGA1O94964 1423 aa14.59□□□□□ -0.07
CDC42EP3-204ENST00000457889 POLA1P09884 1462 aaPredicted RBP14.59□□□□□ -0.07
CDC42EP3-204ENST00000457889 KIF27Q86VH2 1401 aa14.58□□□□□ -0.07
CDC42EP3-204ENST00000457889 ABCA10Q8WWZ4 1543 aa14.56□□□□□ -0.08
CDC42EP3-204ENST00000457889 THOC2Q8NI27 1593 aaKnown RBP14.53□□□□□ -0.08
CDC42EP3-204ENST00000457889 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
CDC42EP3-204ENST00000457889 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
CDC42EP3-204ENST00000457889 CUX2O14529 1486 aa14.5□□□□□ -0.09
CDC42EP3-204ENST00000457889 FAM9AQ8IZU1 332 aaPredicted RBP14.5□□□□□ -0.09
CDC42EP3-204ENST00000457889 WDR97A6NE52 1622 aa14.5□□□□□ -0.09
CDC42EP3-204ENST00000457889 KIF21BO75037 1637 aa14.5□□□□□ -0.09
CDC42EP3-204ENST00000457889 RUSC2Q8N2Y8 1516 aa14.49□□□□□ -0.09
CDC42EP3-204ENST00000457889 IFT140Q96RY7 1462 aa14.48□□□□□ -0.09
CDC42EP3-204ENST00000457889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.09
CDC42EP3-204ENST00000457889 TARBP1Q13395 1621 aaKnown RBP14.47□□□□□ -0.09
CDC42EP3-204ENST00000457889 RAD54L2Q9Y4B4 1467 aa14.46□□□□□ -0.09
CDC42EP3-204ENST00000457889 ERICH3Q5RHP9 1530 aa14.46□□□□□ -0.1
CDC42EP3-204ENST00000457889 GOLGA3Q08378 1498 aa14.45□□□□□ -0.1
CDC42EP3-204ENST00000457889 PRXQ9BXM0 1461 aa14.44□□□□□ -0.1
CDC42EP3-204ENST00000457889 ABCA5Q8WWZ7 1642 aa14.43□□□□□ -0.1
CDC42EP3-204ENST00000457889 IGF1RP08069 1367 aa14.4□□□□□ -0.1
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