RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 NISCHQ9Y2I1 1504 aa26.26■■□□□ 1.79
LINC00473-202ENST00000455853 CCDC180Q9P1Z9 1646 aa23.32■■□□□ 1.32
LINC00473-202ENST00000455853 ABCC9O60706 1549 aa23.17■■□□□ 1.3
LINC00473-202ENST00000455853 DCAF8L2P0C7V8 631 aa22.13■■□□□ 1.13
LINC00473-202ENST00000455853 RB1CC1Q8TDY2 1594 aa22.1■■□□□ 1.13
LINC00473-202ENST00000455853 ZCCHC6Q5VYS8 1495 aaKnown RBP22.02■■□□□ 1.12
LINC00473-202ENST00000455853 NACADO15069 1562 aa22.02■■□□□ 1.12
LINC00473-202ENST00000455853 SHROOM4Q9ULL8 1493 aa21.91■■□□□ 1.1
LINC00473-202ENST00000455853 MYO15BQ96JP2 1530 aa21.81■■□□□ 1.08
LINC00473-202ENST00000455853 SUPT5HO00267 1087 aaKnown RBP21.66■■□□□ 1.06
LINC00473-202ENST00000455853 PABPN1Q86U42 306 aaKnown RBP eCLIP21.66■■□□□ 1.06
LINC00473-202ENST00000455853 DCAF1Q9Y4B6 1507 aa21.66■■□□□ 1.06
LINC00473-202ENST00000455853 UNC13AQ9UPW8 1703 aa21.55■■□□□ 1.04
LINC00473-202ENST00000455853 DNAJC5BQ9UF47 199 aa21.5■■□□□ 1.03
LINC00473-202ENST00000455853 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
LINC00473-202ENST00000455853 SCRIBQ14160 1630 aa21.37■■□□□ 1.01
LINC00473-202ENST00000455853 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
LINC00473-202ENST00000455853 HRCP23327 699 aa21.26■□□□□ 0.99
LINC00473-202ENST00000455853 EIF4G1Q04637 1599 aaKnown RBP20.92■□□□□ 0.94
LINC00473-202ENST00000455853 CC2D2AQ9P2K1 1620 aa20.88■□□□□ 0.93
LINC00473-202ENST00000455853 PCGF6Q9BYE7 350 aa20.87■□□□□ 0.93
LINC00473-202ENST00000455853 CECR2Q9BXF3 1484 aa20.8■□□□□ 0.92
LINC00473-202ENST00000455853 TRIM26Q12899 539 aaPredicted RBP20.63■□□□□ 0.89
LINC00473-202ENST00000455853 RSF1Q96T23 1441 aaPredicted RBP20.54■□□□□ 0.88
LINC00473-202ENST00000455853 LOC105371045A0A1W2PR82 267 aa20.54■□□□□ 0.88
LINC00473-202ENST00000455853 ZEB1P37275 1124 aaPredicted RBP20.5■□□□□ 0.87
LINC00473-202ENST00000455853 PPARGC1BQ86YN6 1023 aaKnown RBP20.45■□□□□ 0.86
LINC00473-202ENST00000455853 SMARCA4P51532 1647 aa20.39■□□□□ 0.85
LINC00473-202ENST00000455853 NCAPD3P42695 1498 aa20.37■□□□□ 0.85
LINC00473-202ENST00000455853 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
LINC00473-202ENST00000455853 BAZ1AQ9NRL2 1556 aaPredicted RBP20.33■□□□□ 0.85
LINC00473-202ENST00000455853 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
LINC00473-202ENST00000455853 SMARCA2P51531 1590 aa20.27■□□□□ 0.84
LINC00473-202ENST00000455853 MROH2BQ7Z745 1585 aa20.27■□□□□ 0.84
LINC00473-202ENST00000455853 HMGXB3Q12766 1538 aa20.2■□□□□ 0.82
LINC00473-202ENST00000455853 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
LINC00473-202ENST00000455853 BAZ1BQ9UIG0 1483 aaKnown RBP20.17■□□□□ 0.82
LINC00473-202ENST00000455853 PELP1Q8IZL8 1130 aaKnown RBP20.02■□□□□ 0.79
LINC00473-202ENST00000455853 WIZO95785 1651 aa20.01■□□□□ 0.79
LINC00473-202ENST00000455853 NESP48681 1621 aa20■□□□□ 0.79
LINC00473-202ENST00000455853 ERCC6Q03468 1493 aa19.94■□□□□ 0.78
LINC00473-202ENST00000455853 FAM9AQ8IZU1 332 aaPredicted RBP19.93■□□□□ 0.78
LINC00473-202ENST00000455853 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
LINC00473-202ENST00000455853 LAMC3Q9Y6N6 1575 aa19.81■□□□□ 0.76
LINC00473-202ENST00000455853 WRNQ14191 1432 aaPredicted RBP eCLIP19.79■□□□□ 0.76
LINC00473-202ENST00000455853 CADPSQ9ULU8 1353 aa19.78■□□□□ 0.76
LINC00473-202ENST00000455853 CUX2O14529 1486 aa19.75■□□□□ 0.75
LINC00473-202ENST00000455853 PDS5BQ9NTI5 1447 aa19.73■□□□□ 0.75
LINC00473-202ENST00000455853 EEA1Q15075 1411 aa19.72■□□□□ 0.75
LINC00473-202ENST00000455853 KIF21AQ7Z4S6 1674 aa19.66■□□□□ 0.74
LINC00473-202ENST00000455853 THOC2Q8NI27 1593 aaKnown RBP19.65■□□□□ 0.74
LINC00473-202ENST00000455853 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
LINC00473-202ENST00000455853 CCER1Q8TC90 406 aaPredicted RBP19.62■□□□□ 0.73
LINC00473-202ENST00000455853 TNIKQ9UKE5 1360 aa19.62■□□□□ 0.73
LINC00473-202ENST00000455853 CFTRP13569 1480 aa19.61■□□□□ 0.73
LINC00473-202ENST00000455853 CCDC88BA6NC98 1476 aa19.61■□□□□ 0.73
LINC00473-202ENST00000455853 CEP162Q5TB80 1403 aa19.58■□□□□ 0.72
LINC00473-202ENST00000455853 EHMT2Q96KQ7 1210 aa19.58■□□□□ 0.72
LINC00473-202ENST00000455853 ABCC8Q09428 1581 aa19.56■□□□□ 0.72
LINC00473-202ENST00000455853 FANCD2Q9BXW9 1451 aa19.55■□□□□ 0.72
LINC00473-202ENST00000455853 MRC2Q9UBG0 1479 aa19.54■□□□□ 0.72
LINC00473-202ENST00000455853 CEP164Q9UPV0 1460 aa19.52■□□□□ 0.72
LINC00473-202ENST00000455853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.51■□□□□ 0.71
LINC00473-202ENST00000455853 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
LINC00473-202ENST00000455853 CENPBP07199 599 aaPredicted RBP19.47■□□□□ 0.71
LINC00473-202ENST00000455853 GOLGA3Q08378 1498 aa19.47■□□□□ 0.71
LINC00473-202ENST00000455853 WDR62O43379 1518 aa19.46■□□□□ 0.71
LINC00473-202ENST00000455853 DNAJC5Q9H3Z4 198 aa19.45■□□□□ 0.7
LINC00473-202ENST00000455853 CSRNP3Q8WYN3 585 aa19.42■□□□□ 0.7
LINC00473-202ENST00000455853 DIEXFQ68CQ4 756 aaKnown RBP19.41■□□□□ 0.7
LINC00473-202ENST00000455853 SOGA1O94964 1423 aa19.41■□□□□ 0.7
LINC00473-202ENST00000455853 KIF21BO75037 1637 aa19.39■□□□□ 0.7
LINC00473-202ENST00000455853 URB2Q14146 1524 aaKnown RBP19.38■□□□□ 0.69
LINC00473-202ENST00000455853 PRDM2Q13029 1718 aa19.3■□□□□ 0.68
LINC00473-202ENST00000455853 NEUROD1Q13562 356 aa19.3■□□□□ 0.68
LINC00473-202ENST00000455853 UBTFP17480 764 aaKnown RBP19.28■□□□□ 0.68
LINC00473-202ENST00000455853 ZNF316A6NFI3 1004 aaPredicted RBP19.27■□□□□ 0.68
LINC00473-202ENST00000455853 RUSC2Q8N2Y8 1516 aa19.26■□□□□ 0.67
LINC00473-202ENST00000455853 MYT1Q01538 1121 aa19.22■□□□□ 0.67
LINC00473-202ENST00000455853 TOPBP1Q92547 1522 aa19.21■□□□□ 0.67
LINC00473-202ENST00000455853 SYNJ1O43426 1573 aa19.2■□□□□ 0.66
LINC00473-202ENST00000455853 VPS8Q8N3P4 1428 aa19.18■□□□□ 0.66
LINC00473-202ENST00000455853 CLIP1P30622 1438 aa19.17■□□□□ 0.66
LINC00473-202ENST00000455853 GTF3C3Q9Y5Q9 886 aa19.16■□□□□ 0.66
LINC00473-202ENST00000455853 DNMBPQ6XZF7 1577 aa19.14■□□□□ 0.66
LINC00473-202ENST00000455853 IFT140Q96RY7 1462 aa19.12■□□□□ 0.65
LINC00473-202ENST00000455853 ZNF608Q9ULD9 1512 aaPredicted RBP19.11■□□□□ 0.65
LINC00473-202ENST00000455853 TTBK1Q5TCY1 1321 aaPredicted RBP19.08■□□□□ 0.64
LINC00473-202ENST00000455853 CLSPNQ9HAW4 1339 aa19.07■□□□□ 0.64
LINC00473-202ENST00000455853 TOP2BQ02880 1626 aa19.06■□□□□ 0.64
LINC00473-202ENST00000455853 POLA1P09884 1462 aaPredicted RBP19.05■□□□□ 0.64
LINC00473-202ENST00000455853 APLP2Q06481 763 aa19.05■□□□□ 0.64
LINC00473-202ENST00000455853 BIVM-ERCC5R4GMW8 1640 aa19.04■□□□□ 0.64
LINC00473-202ENST00000455853 ERICH3Q5RHP9 1530 aa19.04■□□□□ 0.64
LINC00473-202ENST00000455853 RAD54L2Q9Y4B4 1467 aa19.01■□□□□ 0.63
LINC00473-202ENST00000455853 CUX1P39880 1505 aa19.01■□□□□ 0.63
LINC00473-202ENST00000455853 TARBP1Q13395 1621 aaKnown RBP18.99■□□□□ 0.63
LINC00473-202ENST00000455853 AQRO60306 1485 aaKnown RBP eCLIP18.99■□□□□ 0.63
LINC00473-202ENST00000455853 FGD5Q6ZNL6 1462 aa18.98■□□□□ 0.63
LINC00473-202ENST00000455853 RAPGEF2Q9Y4G8 1499 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms