RNA–Protein interactions for RNA: ENST00000454257.5

CCDC148-207, Transcript of coiled-coil domain containing 148, humanhuman

TSL 2

Gene CCDC148, Length 2,075 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-207ENST00000454257 NISCHQ9Y2I1 1504 aa19.94■□□□□ 0.78
CCDC148-207ENST00000454257 AEBP2Q6ZN18 517 aaPredicted RBP19.5■□□□□ 0.71
CCDC148-207ENST00000454257 CHIC1Q5VXU3 224 aa18.72■□□□□ 0.59
CCDC148-207ENST00000454257 CCDC180Q9P1Z9 1646 aa17.56■□□□□ 0.4
CCDC148-207ENST00000454257 ABCC9O60706 1549 aa17.45■□□□□ 0.38
CCDC148-207ENST00000454257 SHROOM4Q9ULL8 1493 aa17.1■□□□□ 0.33
CCDC148-207ENST00000454257 ZCCHC6Q5VYS8 1495 aaKnown RBP16.9■□□□□ 0.3
CCDC148-207ENST00000454257 SUPT5HO00267 1087 aaKnown RBP16.85■□□□□ 0.29
CCDC148-207ENST00000454257 DCAF8L2P0C7V8 631 aa16.79■□□□□ 0.28
CCDC148-207ENST00000454257 RB1CC1Q8TDY2 1594 aa16.66■□□□□ 0.26
CCDC148-207ENST00000454257 SENP3Q9H4L4 574 aaPredicted RBP16.66■□□□□ 0.26
CCDC148-207ENST00000454257 NACADO15069 1562 aa16.61■□□□□ 0.25
CCDC148-207ENST00000454257 MYO15BQ96JP2 1530 aa16.47■□□□□ 0.23
CCDC148-207ENST00000454257 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
CCDC148-207ENST00000454257 DCAF1Q9Y4B6 1507 aa16.37■□□□□ 0.21
CCDC148-207ENST00000454257 PABPN1Q86U42 306 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCDC148-207ENST00000454257 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
CCDC148-207ENST00000454257 HRCP23327 699 aa16.18■□□□□ 0.18
CCDC148-207ENST00000454257 UNC13AQ9UPW8 1703 aa16.18■□□□□ 0.18
CCDC148-207ENST00000454257 BICRAQ9NZM4 1560 aa16.16■□□□□ 0.18
CCDC148-207ENST00000454257 SCRIBQ14160 1630 aa16.1■□□□□ 0.17
CCDC148-207ENST00000454257 PCGF6Q9BYE7 350 aa16.08■□□□□ 0.16
CCDC148-207ENST00000454257 LOC105371045A0A1W2PR82 267 aa15.93■□□□□ 0.14
CCDC148-207ENST00000454257 RSF1Q96T23 1441 aaPredicted RBP15.83■□□□□ 0.12
CCDC148-207ENST00000454257 TRIM26Q12899 539 aaPredicted RBP15.77■□□□□ 0.12
CCDC148-207ENST00000454257 PPARGC1BQ86YN6 1023 aaKnown RBP15.77■□□□□ 0.12
CCDC148-207ENST00000454257 EIF4G1Q04637 1599 aaKnown RBP15.75■□□□□ 0.11
CCDC148-207ENST00000454257 CC2D2AQ9P2K1 1620 aa15.72■□□□□ 0.11
CCDC148-207ENST00000454257 TRIM41Q8WV44 630 aa15.71■□□□□ 0.11
CCDC148-207ENST00000454257 CECR2Q9BXF3 1484 aa15.68■□□□□ 0.1
CCDC148-207ENST00000454257 FAM9AQ8IZU1 332 aaPredicted RBP15.56■□□□□ 0.08
CCDC148-207ENST00000454257 ZEB1P37275 1124 aaPredicted RBP15.53■□□□□ 0.08
CCDC148-207ENST00000454257 MROH2BQ7Z745 1585 aa15.49■□□□□ 0.07
CCDC148-207ENST00000454257 FOXD1Q16676 465 aa15.47■□□□□ 0.07
CCDC148-207ENST00000454257 EHMT2Q96KQ7 1210 aa15.42■□□□□ 0.06
CCDC148-207ENST00000454257 WIZO95785 1651 aa15.4■□□□□ 0.06
CCDC148-207ENST00000454257 NCAPD3P42695 1498 aa15.38■□□□□ 0.05
CCDC148-207ENST00000454257 ATAD2BQ9ULI0 1458 aa15.37■□□□□ 0.05
CCDC148-207ENST00000454257 SMARCA4P51532 1647 aa15.36■□□□□ 0.05
CCDC148-207ENST00000454257 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
CCDC148-207ENST00000454257 SMARCA2P51531 1590 aa15.31■□□□□ 0.04
CCDC148-207ENST00000454257 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
CCDC148-207ENST00000454257 HMGXB3Q12766 1538 aa15.23■□□□□ 0.03
CCDC148-207ENST00000454257 TOP2AP11388 1531 aaKnown RBP15.21■□□□□ 0.02
CCDC148-207ENST00000454257 PEG3Q9GZU2 1588 aa15.2■□□□□ 0.02
CCDC148-207ENST00000454257 CCDC88BA6NC98 1476 aa15.13■□□□□ 0.01
CCDC148-207ENST00000454257 ABCC8Q09428 1581 aa15.12■□□□□ 0.01
CCDC148-207ENST00000454257 CCER1Q8TC90 406 aaPredicted RBP15.1■□□□□ 0.01
CCDC148-207ENST00000454257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.08■□□□□ 0
CCDC148-207ENST00000454257 WRNQ14191 1432 aaPredicted RBP eCLIP15.06■□□□□ 0
CCDC148-207ENST00000454257 NESP48681 1621 aa15.06■□□□□ 0
CCDC148-207ENST00000454257 PLPPR3Q6T4P5 718 aa15.06■□□□□ 0
CCDC148-207ENST00000454257 CEP162Q5TB80 1403 aa15.05■□□□□ -0
CCDC148-207ENST00000454257 ERCC6Q03468 1493 aa15.05■□□□□ -0
CCDC148-207ENST00000454257 EEA1Q15075 1411 aa15.03■□□□□ -0
CCDC148-207ENST00000454257 TNIKQ9UKE5 1360 aa15.02□□□□□ -0.01
CCDC148-207ENST00000454257 SOGA1O94964 1423 aa15.01□□□□□ -0.01
CCDC148-207ENST00000454257 CSRNP3Q8WYN3 585 aa14.98□□□□□ -0.01
CCDC148-207ENST00000454257 TTBK1Q5TCY1 1321 aaPredicted RBP14.97□□□□□ -0.01
CCDC148-207ENST00000454257 SCAF1Q9H7N4 1312 aaKnown RBP14.97□□□□□ -0.01
CCDC148-207ENST00000454257 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.01
CCDC148-207ENST00000454257 UBTFP17480 764 aaKnown RBP14.96□□□□□ -0.02
CCDC148-207ENST00000454257 LAMC3Q9Y6N6 1575 aa14.94□□□□□ -0.02
CCDC148-207ENST00000454257 GOLGA3Q08378 1498 aa14.92□□□□□ -0.02
CCDC148-207ENST00000454257 PELP1Q8IZL8 1130 aaKnown RBP14.92□□□□□ -0.02
CCDC148-207ENST00000454257 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
CCDC148-207ENST00000454257 RUSC2Q8N2Y8 1516 aa14.91□□□□□ -0.02
CCDC148-207ENST00000454257 CUX2O14529 1486 aa14.88□□□□□ -0.03
CCDC148-207ENST00000454257 DIEXFQ68CQ4 756 aaKnown RBP14.86□□□□□ -0.03
CCDC148-207ENST00000454257 ACIN1Q9UKV3 1341 aaKnown RBP14.82□□□□□ -0.04
CCDC148-207ENST00000454257 CEP164Q9UPV0 1460 aa14.82□□□□□ -0.04
CCDC148-207ENST00000454257 CFTRP13569 1480 aa14.81□□□□□ -0.04
CCDC148-207ENST00000454257 CENPBP07199 599 aaPredicted RBP14.78□□□□□ -0.04
CCDC148-207ENST00000454257 KIF21BO75037 1637 aa14.78□□□□□ -0.04
CCDC148-207ENST00000454257 SYNJ1O43426 1573 aa14.77□□□□□ -0.04
CCDC148-207ENST00000454257 KIF21AQ7Z4S6 1674 aa14.77□□□□□ -0.04
CCDC148-207ENST00000454257 NEUROD1Q13562 356 aa14.76□□□□□ -0.05
CCDC148-207ENST00000454257 THOC2Q8NI27 1593 aaKnown RBP14.76□□□□□ -0.05
CCDC148-207ENST00000454257 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
CCDC148-207ENST00000454257 CLIP1P30622 1438 aa14.75□□□□□ -0.05
CCDC148-207ENST00000454257 MRC2Q9UBG0 1479 aa14.73□□□□□ -0.05
CCDC148-207ENST00000454257 ZNF316A6NFI3 1004 aaPredicted RBP14.72□□□□□ -0.05
CCDC148-207ENST00000454257 APLP2Q06481 763 aa14.7□□□□□ -0.06
CCDC148-207ENST00000454257 VPS8Q8N3P4 1428 aa14.7□□□□□ -0.06
CCDC148-207ENST00000454257 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
CCDC148-207ENST00000454257 DNAJC5Q9H3Z4 198 aa14.68□□□□□ -0.06
CCDC148-207ENST00000454257 WDR62O43379 1518 aa14.66□□□□□ -0.06
CCDC148-207ENST00000454257 RAPGEF2Q9Y4G8 1499 aa14.65□□□□□ -0.06
CCDC148-207ENST00000454257 GTF3C3Q9Y5Q9 886 aa14.64□□□□□ -0.07
CCDC148-207ENST00000454257 URB2Q14146 1524 aaKnown RBP14.61□□□□□ -0.07
CCDC148-207ENST00000454257 RANGAP1P46060 587 aaPredicted RBP14.6□□□□□ -0.07
CCDC148-207ENST00000454257 TOP2BQ02880 1626 aa14.6□□□□□ -0.07
CCDC148-207ENST00000454257 PPP6R1Q9UPN7 881 aa14.59□□□□□ -0.07
CCDC148-207ENST00000454257 ADRA2BP18089 450 aa14.57□□□□□ -0.08
CCDC148-207ENST00000454257 BIVM-ERCC5R4GMW8 1640 aa14.54□□□□□ -0.08
CCDC148-207ENST00000454257 ERICH3Q5RHP9 1530 aa14.53□□□□□ -0.08
CCDC148-207ENST00000454257 PIAS4Q8N2W9 510 aaPredicted RBP14.53□□□□□ -0.08
CCDC148-207ENST00000454257 YTHDC1Q96MU7 727 aaKnown RBP14.52□□□□□ -0.09
CCDC148-207ENST00000454257 PRDM2Q13029 1718 aa14.51□□□□□ -0.09
CCDC148-207ENST00000454257 PRXQ9BXM0 1461 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms