RNA–Protein interactions for RNA: ENST00000443583.6

CNTNAP3-206, Transcript of contactin associated protein like 3, human

TSL 2

Gene CNTNAP3, Length 2,411 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP3-206	ENST00000443583	NISCH	Q9Y2I1	1504 aa		37.74	■■■■□ 3.63
CNTNAP3-206	ENST00000443583	SHROOM4	Q9ULL8	1493 aa		32.38	■■■□□ 2.77
CNTNAP3-206	ENST00000443583	CCDC180	Q9P1Z9	1646 aa		32.28	■■■□□ 2.76
CNTNAP3-206	ENST00000443583	ZCCHC6	Q5VYS8	1495 aa	Known RBP	31.95	■■■□□ 2.7
CNTNAP3-206	ENST00000443583	SUPT5H	O00267	1087 aa	Known RBP	31.85	■■■□□ 2.69
CNTNAP3-206	ENST00000443583	DCAF8L2	P0C7V8	631 aa		31.39	■■■□□ 2.62
CNTNAP3-206	ENST00000443583	CHIC1	Q5VXU3	224 aa		31.03	■■■□□ 2.56
CNTNAP3-206	ENST00000443583	ABCC9	O60706	1549 aa		30.99	■■■□□ 2.55
CNTNAP3-206	ENST00000443583	MYO15B	Q96JP2	1530 aa		30.98	■■■□□ 2.55
CNTNAP3-206	ENST00000443583	DCAF1	Q9Y4B6	1507 aa		30.92	■■■□□ 2.54
CNTNAP3-206	ENST00000443583	HRC	P23327	699 aa		30.41	■■■□□ 2.46
CNTNAP3-206	ENST00000443583	PCGF6	Q9BYE7	350 aa		30.32	■■■□□ 2.44
CNTNAP3-206	ENST00000443583	LOC105371045	A0A1W2PR82	267 aa		30.18	■■■□□ 2.42
CNTNAP3-206	ENST00000443583	NACAD	O15069	1562 aa		30.16	■■■□□ 2.42
CNTNAP3-206	ENST00000443583	SCRIB	Q14160	1630 aa		30.09	■■■□□ 2.41
CNTNAP3-206	ENST00000443583	RB1CC1	Q8TDY2	1594 aa		29.99	■■■□□ 2.39
CNTNAP3-206	ENST00000443583	RSF1	Q96T23	1441 aa	Predicted RBP	29.94	■■■□□ 2.38
CNTNAP3-206	ENST00000443583	PPARGC1B	Q86YN6	1023 aa	Known RBP	29.84	■■■□□ 2.37
CNTNAP3-206	ENST00000443583	TRIM26	Q12899	539 aa	Predicted RBP	29.63	■■■□□ 2.33
CNTNAP3-206	ENST00000443583	TRIM41	Q8WV44	630 aa		29.6	■■■□□ 2.33
CNTNAP3-206	ENST00000443583	CECR2	Q9BXF3	1484 aa		29.46	■■■□□ 2.31
CNTNAP3-206	ENST00000443583	FAM9A	Q8IZU1	332 aa	Predicted RBP	29.44	■■■□□ 2.3
CNTNAP3-206	ENST00000443583	UNC13A	Q9UPW8	1703 aa		29.44	■■■□□ 2.3
CNTNAP3-206	ENST00000443583	MROH2B	Q7Z745	1585 aa		29.37	■■■□□ 2.29
CNTNAP3-206	ENST00000443583	EHMT2	Q96KQ7	1210 aa		29.25	■■■□□ 2.27
CNTNAP3-206	ENST00000443583	PABPN1	Q86U42	306 aa	Known RBP eCLIP	29.23	■■■□□ 2.27
CNTNAP3-206	ENST00000443583	WIZ	O95785	1651 aa		29.22	■■■□□ 2.27
CNTNAP3-206	ENST00000443583	BICRA	Q9NZM4	1560 aa		29.15	■■■□□ 2.26
CNTNAP3-206	ENST00000443583	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	29.03	■■■□□ 2.24
CNTNAP3-206	ENST00000443583	ZEB1	P37275	1124 aa	Predicted RBP	29.01	■■■□□ 2.23
CNTNAP3-206	ENST00000443583	EIF4G1	Q04637	1599 aa	Known RBP	28.84	■■■□□ 2.21
CNTNAP3-206	ENST00000443583	TOP2A	P11388	1531 aa	Known RBP	28.74	■■■□□ 2.19
CNTNAP3-206	ENST00000443583	SMARCA4	P51532	1647 aa		28.72	■■■□□ 2.19
CNTNAP3-206	ENST00000443583	CCDC88B	A6NC98	1476 aa		28.65	■■■□□ 2.18
CNTNAP3-206	ENST00000443583	ABCC8	Q09428	1581 aa		28.64	■■■□□ 2.18
CNTNAP3-206	ENST00000443583	SMARCA2	P51531	1590 aa		28.6	■■■□□ 2.17
CNTNAP3-206	ENST00000443583	PELP1	Q8IZL8	1130 aa	Known RBP	28.49	■■■□□ 2.15
CNTNAP3-206	ENST00000443583	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	28.48	■■■□□ 2.15
CNTNAP3-206	ENST00000443583	SOGA1	O94964	1423 aa		28.4	■■■□□ 2.14
CNTNAP3-206	ENST00000443583	CCER1	Q8TC90	406 aa	Predicted RBP	28.38	■■■□□ 2.13
CNTNAP3-206	ENST00000443583	TTBK1	Q5TCY1	1321 aa	Predicted RBP	28.35	■■■□□ 2.13
CNTNAP3-206	ENST00000443583	CEP162	Q5TB80	1403 aa		28.33	■■■□□ 2.13
CNTNAP3-206	ENST00000443583	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.31	■■■□□ 2.12
CNTNAP3-206	ENST00000443583	RUSC2	Q8N2Y8	1516 aa		28.27	■■■□□ 2.12
CNTNAP3-206	ENST00000443583	TNIK	Q9UKE5	1360 aa		28.25	■■■□□ 2.11
CNTNAP3-206	ENST00000443583	CSRNP3	Q8WYN3	585 aa		28.24	■■■□□ 2.11
CNTNAP3-206	ENST00000443583	EEA1	Q15075	1411 aa		28.23	■■■□□ 2.11
CNTNAP3-206	ENST00000443583	UBTF	P17480	764 aa	Known RBP	28.19	■■■□□ 2.1
CNTNAP3-206	ENST00000443583	SCAF1	Q9H7N4	1312 aa	Known RBP	28.19	■■■□□ 2.1
CNTNAP3-206	ENST00000443583	PEG3	Q9GZU2	1588 aa		28.13	■■■□□ 2.09
CNTNAP3-206	ENST00000443583	ATAD2B	Q9ULI0	1458 aa		28.1	■■■□□ 2.09
CNTNAP3-206	ENST00000443583	GOLGA3	Q08378	1498 aa		28.08	■■■□□ 2.09
CNTNAP3-206	ENST00000443583	SYNJ1	O43426	1573 aa		27.98	■■■□□ 2.07
CNTNAP3-206	ENST00000443583	CC2D2A	Q9P2K1	1620 aa		27.97	■■■□□ 2.07
CNTNAP3-206	ENST00000443583	DIEXF	Q68CQ4	756 aa	Known RBP	27.93	■■■□□ 2.06
CNTNAP3-206	ENST00000443583	BAZ1B	Q9UIG0	1483 aa	Known RBP	27.92	■■■□□ 2.06
CNTNAP3-206	ENST00000443583	CEP164	Q9UPV0	1460 aa		27.9	■■■□□ 2.06
CNTNAP3-206	ENST00000443583	NCAPD3	P42695	1498 aa		27.86	■■■□□ 2.05
CNTNAP3-206	ENST00000443583	KIF21B	O75037	1637 aa		27.84	■■■□□ 2.05
CNTNAP3-206	ENST00000443583	ACIN1	Q9UKV3	1341 aa	Known RBP	27.82	■■■□□ 2.04
CNTNAP3-206	ENST00000443583	NEUROD1	Q13562	356 aa		27.81	■■■□□ 2.04
CNTNAP3-206	ENST00000443583	CLIP1	P30622	1438 aa		27.78	■■■□□ 2.04
CNTNAP3-206	ENST00000443583	HMGXB3	Q12766	1538 aa		27.77	■■■□□ 2.04
CNTNAP3-206	ENST00000443583	HNRNPUL2	Q1KMD3	747 aa	Known RBP	27.72	■■■□□ 2.03
CNTNAP3-206	ENST00000443583	RAPGEF2	Q9Y4G8	1499 aa		27.7	■■■□□ 2.02
CNTNAP3-206	ENST00000443583	VPS8	Q8N3P4	1428 aa		27.66	■■■□□ 2.02
CNTNAP3-206	ENST00000443583	DNAJC5B	Q9UF47	199 aa		27.66	■■■□□ 2.02
CNTNAP3-206	ENST00000443583	RANGAP1	P46060	587 aa	Predicted RBP	27.66	■■■□□ 2.02
CNTNAP3-206	ENST00000443583	ZNF316	A6NFI3	1004 aa	Predicted RBP	27.65	■■■□□ 2.02
CNTNAP3-206	ENST00000443583	MYT1	Q01538	1121 aa		27.62	■■■□□ 2.01
CNTNAP3-206	ENST00000443583	TOP2B	Q02880	1626 aa		27.61	■■■□□ 2.01
CNTNAP3-206	ENST00000443583	CENPB	P07199	599 aa	Predicted RBP	27.59	■■■□□ 2.01
CNTNAP3-206	ENST00000443583	APLP2	Q06481	763 aa		27.59	■■■□□ 2.01
CNTNAP3-206	ENST00000443583	GTF3C3	Q9Y5Q9	886 aa		27.54	■■■□□ 2
CNTNAP3-206	ENST00000443583	BIVM-ERCC5	R4GMW8	1640 aa		27.49	■■□□□ 1.99
CNTNAP3-206	ENST00000443583	PRX	Q9BXM0	1461 aa		27.38	■■□□□ 1.97
CNTNAP3-206	ENST00000443583	ERICH3	Q5RHP9	1530 aa		27.37	■■□□□ 1.97
CNTNAP3-206	ENST00000443583	YTHDC1	Q96MU7	727 aa	Known RBP	27.33	■■□□□ 1.97
CNTNAP3-206	ENST00000443583	MIER1	Q8N108	512 aa		27.33	■■□□□ 1.97
CNTNAP3-206	ENST00000443583	CUX1	P39880	1505 aa		27.33	■■□□□ 1.97
CNTNAP3-206	ENST00000443583	ARAP1	Q96P48	1450 aa		27.29	■■□□□ 1.96
CNTNAP3-206	ENST00000443583	KIF27	Q86VH2	1401 aa		27.25	■■□□□ 1.95
CNTNAP3-206	ENST00000443583	KANK4	Q5T7N3	995 aa	Predicted RBP	27.24	■■□□□ 1.95
CNTNAP3-206	ENST00000443583	CFTR	P13569	1480 aa		27.21	■■□□□ 1.95
CNTNAP3-206	ENST00000443583	CADPS	Q9ULU8	1353 aa		27.17	■■□□□ 1.94
CNTNAP3-206	ENST00000443583	DHX57	Q6P158	1386 aa	Known RBP	27.14	■■□□□ 1.94
CNTNAP3-206	ENST00000443583	NES	P48681	1621 aa		27.12	■■□□□ 1.93
CNTNAP3-206	ENST00000443583	CLSPN	Q9HAW4	1339 aa		27.07	■■□□□ 1.92
CNTNAP3-206	ENST00000443583	ARHGAP35	Q9NRY4	1499 aa		27.05	■■□□□ 1.92
CNTNAP3-206	ENST00000443583	RRBP1	Q9P2E9	1410 aa	Known RBP	27.03	■■□□□ 1.92
CNTNAP3-206	ENST00000443583	CUX2	O14529	1486 aa		26.98	■■□□□ 1.91
CNTNAP3-206	ENST00000443583	PRDM2	Q13029	1718 aa		26.97	■■□□□ 1.91
CNTNAP3-206	ENST00000443583	LAMC3	Q9Y6N6	1575 aa		26.95	■■□□□ 1.9
CNTNAP3-206	ENST00000443583	IGF1R	P08069	1367 aa		26.93	■■□□□ 1.9
CNTNAP3-206	ENST00000443583	CCNB3	Q8WWL7	1395 aa		26.93	■■□□□ 1.9
CNTNAP3-206	ENST00000443583	ITGAE	P38570	1179 aa		26.91	■■□□□ 1.9
CNTNAP3-206	ENST00000443583	FANCD2	Q9BXW9	1451 aa		26.88	■■□□□ 1.89
CNTNAP3-206	ENST00000443583	FGD5	Q6ZNL6	1462 aa		26.84	■■□□□ 1.89
CNTNAP3-206	ENST00000443583	CARMIL1	Q5VZK9	1371 aa		26.83	■■□□□ 1.89
CNTNAP3-206	ENST00000443583	PDS5B	Q9NTI5	1447 aa		26.78	■■□□□ 1.88

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms