RNA–Protein interactions for RNA: ENST00000439405.2

AP002383.1-201, humanhuman

BASIC

Gene AP002383.1, Length 720 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002383.1-201ENST00000439405 AEBP2Q6ZN18 517 aaPredicted RBP26.69■■□□□ 1.86
AP002383.1-201ENST00000439405 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
AP002383.1-201ENST00000439405 SENP3Q9H4L4 574 aaPredicted RBP22.89■■□□□ 1.25
AP002383.1-201ENST00000439405 PHF23Q9BUL5 403 aaPredicted RBP22.51■■□□□ 1.19
AP002383.1-201ENST00000439405 FOXD1Q16676 465 aa21.28■■□□□ 1
AP002383.1-201ENST00000439405 NISCHQ9Y2I1 1504 aa20.26■□□□□ 0.83
AP002383.1-201ENST00000439405 PLPPR3Q6T4P5 718 aa20.18■□□□□ 0.82
AP002383.1-201ENST00000439405 MSH5O43196 834 aa20.04■□□□□ 0.8
AP002383.1-201ENST00000439405 PIAS4Q8N2W9 510 aaPredicted RBP19.86■□□□□ 0.77
AP002383.1-201ENST00000439405 PPP6R1Q9UPN7 881 aa19.76■□□□□ 0.75
AP002383.1-201ENST00000439405 ADRA2BP18089 450 aa19.69■□□□□ 0.74
AP002383.1-201ENST00000439405 POTEDQ86YR6 584 aa19.69■□□□□ 0.74
AP002383.1-201ENST00000439405 ABCC9O60706 1549 aa18.61■□□□□ 0.57
AP002383.1-201ENST00000439405 CCDC180Q9P1Z9 1646 aa18.32■□□□□ 0.52
AP002383.1-201ENST00000439405 SCAF1Q9H7N4 1312 aaKnown RBP18.14■□□□□ 0.49
AP002383.1-201ENST00000439405 DMRT2Q9Y5R5 561 aa18.12■□□□□ 0.49
AP002383.1-201ENST00000439405 MAPK8IP2Q13387 824 aaPredicted RBP18.1■□□□□ 0.49
AP002383.1-201ENST00000439405 DNAJC5BQ9UF47 199 aa17.79■□□□□ 0.44
AP002383.1-201ENST00000439405 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
AP002383.1-201ENST00000439405 RB1CC1Q8TDY2 1594 aa17.55■□□□□ 0.4
AP002383.1-201ENST00000439405 HOXD11P31277 338 aaPredicted RBP17.41■□□□□ 0.38
AP002383.1-201ENST00000439405 CNKSR2Q8WXI2 1034 aa17.37■□□□□ 0.37
AP002383.1-201ENST00000439405 NACADO15069 1562 aa17.35■□□□□ 0.37
AP002383.1-201ENST00000439405 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.36
AP002383.1-201ENST00000439405 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
AP002383.1-201ENST00000439405 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.36
AP002383.1-201ENST00000439405 RNF216Q9NWF9 866 aaPredicted RBP17.25■□□□□ 0.35
AP002383.1-201ENST00000439405 CACNB1Q02641 598 aaPredicted RBP17.21■□□□□ 0.35
AP002383.1-201ENST00000439405 DCAF8L2P0C7V8 631 aa17.17■□□□□ 0.34
AP002383.1-201ENST00000439405 BICRAQ9NZM4 1560 aa17.15■□□□□ 0.34
AP002383.1-201ENST00000439405 RNF39Q9H2S5 420 aa17.06■□□□□ 0.32
AP002383.1-201ENST00000439405 MYO15BQ96JP2 1530 aa16.99■□□□□ 0.31
AP002383.1-201ENST00000439405 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
AP002383.1-201ENST00000439405 C1QBPQ07021 282 aaKnown RBP16.83■□□□□ 0.28
AP002383.1-201ENST00000439405 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
AP002383.1-201ENST00000439405 CECR2Q9BXF3 1484 aa16.77■□□□□ 0.28
AP002383.1-201ENST00000439405 SHROOM4Q9ULL8 1493 aa16.73■□□□□ 0.27
AP002383.1-201ENST00000439405 ZCCHC6Q5VYS8 1495 aaKnown RBP16.72■□□□□ 0.27
AP002383.1-201ENST00000439405 SCRIBQ14160 1630 aa16.7■□□□□ 0.26
AP002383.1-201ENST00000439405 EIF4G1Q04637 1599 aaKnown RBP16.69■□□□□ 0.26
AP002383.1-201ENST00000439405 DCAF1Q9Y4B6 1507 aa16.68■□□□□ 0.26
AP002383.1-201ENST00000439405 NPM3O75607 178 aaKnown RBP16.67■□□□□ 0.26
AP002383.1-201ENST00000439405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.55■□□□□ 0.24
AP002383.1-201ENST00000439405 DNAJC5Q9H3Z4 198 aa16.47■□□□□ 0.23
AP002383.1-201ENST00000439405 KCNA4P22459 653 aa16.21■□□□□ 0.19
AP002383.1-201ENST00000439405 U3KPZ7 1027 aaPredicted RBP16.19■□□□□ 0.18
AP002383.1-201ENST00000439405 CUX2O14529 1486 aa16.1■□□□□ 0.17
AP002383.1-201ENST00000439405 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
AP002383.1-201ENST00000439405 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
AP002383.1-201ENST00000439405 CAPN15O75808 1086 aa15.96■□□□□ 0.15
AP002383.1-201ENST00000439405 SPINK5Q9NQ38 1064 aaPredicted RBP15.95■□□□□ 0.14
AP002383.1-201ENST00000439405 ATAD2BQ9ULI0 1458 aa15.95■□□□□ 0.14
AP002383.1-201ENST00000439405 NESP48681 1621 aa15.94■□□□□ 0.14
AP002383.1-201ENST00000439405 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
AP002383.1-201ENST00000439405 DSG3P32926 999 aa15.91■□□□□ 0.14
AP002383.1-201ENST00000439405 SMARCA4P51532 1647 aa15.89■□□□□ 0.13
AP002383.1-201ENST00000439405 HMGXB3Q12766 1538 aa15.88■□□□□ 0.13
AP002383.1-201ENST00000439405 SMARCA2P51531 1590 aa15.86■□□□□ 0.13
AP002383.1-201ENST00000439405 THOC2Q8NI27 1593 aaKnown RBP15.84■□□□□ 0.13
AP002383.1-201ENST00000439405 APLP2Q06481 763 aa15.83■□□□□ 0.12
AP002383.1-201ENST00000439405 KIF21AQ7Z4S6 1674 aa15.77■□□□□ 0.12
AP002383.1-201ENST00000439405 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.77■□□□□ 0.12
AP002383.1-201ENST00000439405 HNRNPUL2Q1KMD3 747 aaKnown RBP15.77■□□□□ 0.12
AP002383.1-201ENST00000439405 BAZ1BQ9UIG0 1483 aaKnown RBP15.75■□□□□ 0.11
AP002383.1-201ENST00000439405 PEG3Q9GZU2 1588 aa15.72■□□□□ 0.11
AP002383.1-201ENST00000439405 LAMC3Q9Y6N6 1575 aa15.71■□□□□ 0.11
AP002383.1-201ENST00000439405 ZNF219Q9P2Y4 722 aaPredicted RBP15.71■□□□□ 0.11
AP002383.1-201ENST00000439405 BAZ1AQ9NRL2 1556 aaPredicted RBP15.7■□□□□ 0.1
AP002383.1-201ENST00000439405 TRHP20396 242 aaPredicted RBP15.65■□□□□ 0.1
AP002383.1-201ENST00000439405 SAMD1Q6SPF0 538 aaPredicted RBP15.65■□□□□ 0.1
AP002383.1-201ENST00000439405 MROH2BQ7Z745 1585 aa15.64■□□□□ 0.09
AP002383.1-201ENST00000439405 TRIM41Q8WV44 630 aa15.62■□□□□ 0.09
AP002383.1-201ENST00000439405 PDS5BQ9NTI5 1447 aa15.59■□□□□ 0.09
AP002383.1-201ENST00000439405 ABCB7O75027 752 aa15.53■□□□□ 0.08
AP002383.1-201ENST00000439405 WDR62O43379 1518 aa15.51■□□□□ 0.07
AP002383.1-201ENST00000439405 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
AP002383.1-201ENST00000439405 CADPSQ9ULU8 1353 aa15.5■□□□□ 0.07
AP002383.1-201ENST00000439405 WIZO95785 1651 aa15.48■□□□□ 0.07
AP002383.1-201ENST00000439405 MYCNP04198 464 aaPredicted RBP15.46■□□□□ 0.07
AP002383.1-201ENST00000439405 POTEHQ6S545 545 aa15.42■□□□□ 0.06
AP002383.1-201ENST00000439405 CEP164Q9UPV0 1460 aa15.38■□□□□ 0.05
AP002383.1-201ENST00000439405 FANCD2Q9BXW9 1451 aa15.35■□□□□ 0.05
AP002383.1-201ENST00000439405 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
AP002383.1-201ENST00000439405 OSCARQ8IYS5 282 aa15.3■□□□□ 0.04
AP002383.1-201ENST00000439405 URB2Q14146 1524 aaKnown RBP15.29■□□□□ 0.04
AP002383.1-201ENST00000439405 CFTRP13569 1480 aa15.29■□□□□ 0.04
AP002383.1-201ENST00000439405 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
AP002383.1-201ENST00000439405 RIMBP3CA6NJZ7 1639 aa15.25■□□□□ 0.03
AP002383.1-201ENST00000439405 RIMBP3BA6NNM3 1639 aa15.25■□□□□ 0.03
AP002383.1-201ENST00000439405 RIMBP3Q9UFD9 1639 aa15.25■□□□□ 0.03
AP002383.1-201ENST00000439405 POLA2Q14181 598 aa15.22■□□□□ 0.03
AP002383.1-201ENST00000439405 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
AP002383.1-201ENST00000439405 PRDM2Q13029 1718 aa15.21■□□□□ 0.03
AP002383.1-201ENST00000439405 TOP2AP11388 1531 aaKnown RBP15.18■□□□□ 0.02
AP002383.1-201ENST00000439405 RSF1Q96T23 1441 aaPredicted RBP15.17■□□□□ 0.02
AP002383.1-201ENST00000439405 ZNF608Q9ULD9 1512 aaPredicted RBP15.16■□□□□ 0.02
AP002383.1-201ENST00000439405 ARHGEF11O15085 1522 aa15.12■□□□□ 0.01
AP002383.1-201ENST00000439405 IFT140Q96RY7 1462 aa15.08■□□□□ 0
AP002383.1-201ENST00000439405 CHD1O14646 1710 aa15.06■□□□□ 0
AP002383.1-201ENST00000439405 TOPBP1Q92547 1522 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms