RNA–Protein interactions for RNA: ENST00000438299.5

GLI2-208, Transcript of GLI family zinc finger 2, humanhuman

TSL 5

Gene GLI2, Length 3,724 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI2-208ENST00000438299 NISCHQ9Y2I1 1504 aa29.43■■■□□ 2.3
GLI2-208ENST00000438299 DCAF8L2P0C7V8 631 aa26.9■■□□□ 1.9
GLI2-208ENST00000438299 SHROOM4Q9ULL8 1493 aa26.2■■□□□ 1.79
GLI2-208ENST00000438299 SUPT5HO00267 1087 aaKnown RBP25.67■■□□□ 1.7
GLI2-208ENST00000438299 ABCC9O60706 1549 aa24.88■■□□□ 1.57
GLI2-208ENST00000438299 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
GLI2-208ENST00000438299 ZCCHC6Q5VYS8 1495 aaKnown RBP24.57■■□□□ 1.52
GLI2-208ENST00000438299 EHMT2Q96KQ7 1210 aa24.27■■□□□ 1.48
GLI2-208ENST00000438299 PABPN1Q86U42 306 aaKnown RBP eCLIP24.13■■□□□ 1.45
GLI2-208ENST00000438299 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
GLI2-208ENST00000438299 FAM9AQ8IZU1 332 aaPredicted RBP23.99■■□□□ 1.43
GLI2-208ENST00000438299 CHIC1Q5VXU3 224 aa23.78■■□□□ 1.4
GLI2-208ENST00000438299 TRIM41Q8WV44 630 aa23.7■■□□□ 1.38
GLI2-208ENST00000438299 DCAF1Q9Y4B6 1507 aa23.56■■□□□ 1.36
GLI2-208ENST00000438299 LOC105371045A0A1W2PR82 267 aa23.5■■□□□ 1.35
GLI2-208ENST00000438299 NACADO15069 1562 aa23.44■■□□□ 1.34
GLI2-208ENST00000438299 RB1CC1Q8TDY2 1594 aa23.41■■□□□ 1.34
GLI2-208ENST00000438299 CECR2Q9BXF3 1484 aa23.32■■□□□ 1.32
GLI2-208ENST00000438299 RSF1Q96T23 1441 aaPredicted RBP23.3■■□□□ 1.32
GLI2-208ENST00000438299 TTBK1Q5TCY1 1321 aaPredicted RBP23.25■■□□□ 1.31
GLI2-208ENST00000438299 RANGAP1P46060 587 aaPredicted RBP23.24■■□□□ 1.31
GLI2-208ENST00000438299 PCGF6Q9BYE7 350 aa23.15■■□□□ 1.3
GLI2-208ENST00000438299 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
GLI2-208ENST00000438299 MYO15BQ96JP2 1530 aa23.01■■□□□ 1.27
GLI2-208ENST00000438299 MROH2BQ7Z745 1585 aa22.99■■□□□ 1.27
GLI2-208ENST00000438299 UBTFP17480 764 aaKnown RBP22.99■■□□□ 1.27
GLI2-208ENST00000438299 BAZ1AQ9NRL2 1556 aaPredicted RBP22.74■■□□□ 1.23
GLI2-208ENST00000438299 WIZO95785 1651 aa22.73■■□□□ 1.23
GLI2-208ENST00000438299 APLP2Q06481 763 aa22.58■■□□□ 1.21
GLI2-208ENST00000438299 BAZ1BQ9UIG0 1483 aaKnown RBP22.52■■□□□ 1.2
GLI2-208ENST00000438299 ATP1B4Q9UN42 357 aaPredicted RBP22.52■■□□□ 1.19
GLI2-208ENST00000438299 CCDC88BA6NC98 1476 aa22.48■■□□□ 1.19
GLI2-208ENST00000438299 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
GLI2-208ENST00000438299 CSRNP3Q8WYN3 585 aa22.42■■□□□ 1.18
GLI2-208ENST00000438299 TRIM26Q12899 539 aaPredicted RBP22.38■■□□□ 1.17
GLI2-208ENST00000438299 ABCC8Q09428 1581 aa22.36■■□□□ 1.17
GLI2-208ENST00000438299 ATAD2BQ9ULI0 1458 aa22.29■■□□□ 1.16
GLI2-208ENST00000438299 BICRAQ9NZM4 1560 aa22.28■■□□□ 1.16
GLI2-208ENST00000438299 TOP2AP11388 1531 aaKnown RBP22.28■■□□□ 1.16
GLI2-208ENST00000438299 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
GLI2-208ENST00000438299 SOGA1O94964 1423 aa22.19■■□□□ 1.14
GLI2-208ENST00000438299 UNC13AQ9UPW8 1703 aa22.19■■□□□ 1.14
GLI2-208ENST00000438299 CCER1Q8TC90 406 aaPredicted RBP22.16■■□□□ 1.14
GLI2-208ENST00000438299 SMARCA2P51531 1590 aa22.13■■□□□ 1.13
GLI2-208ENST00000438299 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
GLI2-208ENST00000438299 P3H3Q8IVL6 736 aa22.11■■□□□ 1.13
GLI2-208ENST00000438299 ITGAEP38570 1179 aa22.09■■□□□ 1.13
GLI2-208ENST00000438299 HRCP23327 699 aa22.08■■□□□ 1.12
GLI2-208ENST00000438299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.03■■□□□ 1.12
GLI2-208ENST00000438299 EIF4G1Q04637 1599 aaKnown RBP22.01■■□□□ 1.11
GLI2-208ENST00000438299 RUSC2Q8N2Y8 1516 aa21.97■■□□□ 1.11
GLI2-208ENST00000438299 FBLN2P98095 1184 aa21.94■■□□□ 1.1
GLI2-208ENST00000438299 DNAJC5BQ9UF47 199 aa21.94■■□□□ 1.1
GLI2-208ENST00000438299 ARID3CA6NKF2 412 aa21.88■■□□□ 1.09
GLI2-208ENST00000438299 CEP162Q5TB80 1403 aa21.85■■□□□ 1.09
GLI2-208ENST00000438299 NCAPD3P42695 1498 aa21.81■■□□□ 1.08
GLI2-208ENST00000438299 CADPSQ9ULU8 1353 aa21.79■■□□□ 1.08
GLI2-208ENST00000438299 GOLGA3Q08378 1498 aa21.76■■□□□ 1.07
GLI2-208ENST00000438299 CLIP1P30622 1438 aa21.76■■□□□ 1.07
GLI2-208ENST00000438299 EEA1Q15075 1411 aa21.74■■□□□ 1.07
GLI2-208ENST00000438299 CUX2O14529 1486 aa21.71■■□□□ 1.07
GLI2-208ENST00000438299 KIF27Q86VH2 1401 aa21.71■■□□□ 1.07
GLI2-208ENST00000438299 ZEB1P37275 1124 aaPredicted RBP21.7■■□□□ 1.06
GLI2-208ENST00000438299 TNIKQ9UKE5 1360 aa21.69■■□□□ 1.06
GLI2-208ENST00000438299 CC2D2AQ9P2K1 1620 aa21.68■■□□□ 1.06
GLI2-208ENST00000438299 FAM50AQ14320 339 aaKnown RBP21.66■■□□□ 1.06
GLI2-208ENST00000438299 CEP164Q9UPV0 1460 aa21.65■■□□□ 1.06
GLI2-208ENST00000438299 NESP48681 1621 aa21.64■■□□□ 1.05
GLI2-208ENST00000438299 TDRD9Q8NDG6 1382 aaKnown RBP21.61■■□□□ 1.05
GLI2-208ENST00000438299 SYNJ1O43426 1573 aa21.6■■□□□ 1.05
GLI2-208ENST00000438299 RAPGEF2Q9Y4G8 1499 aa21.58■■□□□ 1.04
GLI2-208ENST00000438299 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
GLI2-208ENST00000438299 CARMIL1Q5VZK9 1371 aa21.52■■□□□ 1.04
GLI2-208ENST00000438299 PEG3Q9GZU2 1588 aa21.5■■□□□ 1.03
GLI2-208ENST00000438299 HMGXB3Q12766 1538 aa21.49■■□□□ 1.03
GLI2-208ENST00000438299 CFTRP13569 1480 aa21.49■■□□□ 1.03
GLI2-208ENST00000438299 ERCC6Q03468 1493 aa21.49■■□□□ 1.03
GLI2-208ENST00000438299 RAD54L2Q9Y4B4 1467 aa21.45■■□□□ 1.02
GLI2-208ENST00000438299 PDS5BQ9NTI5 1447 aa21.45■■□□□ 1.02
GLI2-208ENST00000438299 FGD5Q6ZNL6 1462 aa21.41■■□□□ 1.02
GLI2-208ENST00000438299 CHMP7Q8WUX9 453 aaPredicted RBP21.41■■□□□ 1.02
GLI2-208ENST00000438299 CUX1P39880 1505 aa21.38■■□□□ 1.01
GLI2-208ENST00000438299 KANK4Q5T7N3 995 aaPredicted RBP21.36■■□□□ 1.01
GLI2-208ENST00000438299 IGF1RP08069 1367 aa21.31■■□□□ 1
GLI2-208ENST00000438299 NEUROD1Q13562 356 aa21.27■■□□□ 1
GLI2-208ENST00000438299 VPS8Q8N3P4 1428 aa21.26■□□□□ 0.99
GLI2-208ENST00000438299 TOP2BQ02880 1626 aa21.23■□□□□ 0.99
GLI2-208ENST00000438299 ZNF777Q9ULD5 760 aaPredicted RBP21.22■□□□□ 0.99
GLI2-208ENST00000438299 PELP1Q8IZL8 1130 aaKnown RBP21.2■□□□□ 0.99
GLI2-208ENST00000438299 CHIC2Q9UKJ5 165 aa21.19■□□□□ 0.98
GLI2-208ENST00000438299 YTHDC1Q96MU7 727 aaKnown RBP21.18■□□□□ 0.98
GLI2-208ENST00000438299 TRIM52Q96A61 297 aa21.17■□□□□ 0.98
GLI2-208ENST00000438299 MTUS2Q5JR59 1369 aa21.17■□□□□ 0.98
GLI2-208ENST00000438299 FHOD3Q2V2M9 1422 aa21.16■□□□□ 0.98
GLI2-208ENST00000438299 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.98
GLI2-208ENST00000438299 MYT1LQ9UL68 1186 aa21.14■□□□□ 0.97
GLI2-208ENST00000438299 TOPBP1Q92547 1522 aa21.14■□□□□ 0.97
GLI2-208ENST00000438299 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
GLI2-208ENST00000438299 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
GLI2-208ENST00000438299 PRXQ9BXM0 1461 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms