RNA–Protein interactions for RNA: ENST00000437892.1

LINC00858-202, long intergenic non-protein coding RNA 858, humanhuman

TSL 3

Gene LINC00858, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00858-202ENST00000437892 AEBP2Q6ZN18 517 aaPredicted RBP25■■□□□ 1.59
LINC00858-202ENST00000437892 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
LINC00858-202ENST00000437892 NISCHQ9Y2I1 1504 aa21.91■■□□□ 1.1
LINC00858-202ENST00000437892 PHF23Q9BUL5 403 aaPredicted RBP21.28■■□□□ 1
LINC00858-202ENST00000437892 SENP3Q9H4L4 574 aaPredicted RBP21.06■□□□□ 0.96
LINC00858-202ENST00000437892 FOXD1Q16676 465 aa19.69■□□□□ 0.74
LINC00858-202ENST00000437892 PLPPR3Q6T4P5 718 aa19.38■□□□□ 0.69
LINC00858-202ENST00000437892 CCDC180Q9P1Z9 1646 aa19.22■□□□□ 0.67
LINC00858-202ENST00000437892 PPP6R1Q9UPN7 881 aa18.85■□□□□ 0.61
LINC00858-202ENST00000437892 ADRA2BP18089 450 aa18.74■□□□□ 0.59
LINC00858-202ENST00000437892 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.55
LINC00858-202ENST00000437892 PIAS4Q8N2W9 510 aaPredicted RBP18.39■□□□□ 0.53
LINC00858-202ENST00000437892 DCAF1Q9Y4B6 1507 aa18.25■□□□□ 0.51
LINC00858-202ENST00000437892 MSH5O43196 834 aa18.09■□□□□ 0.49
LINC00858-202ENST00000437892 MYO15BQ96JP2 1530 aa18.07■□□□□ 0.48
LINC00858-202ENST00000437892 ABCC9O60706 1549 aa17.93■□□□□ 0.46
LINC00858-202ENST00000437892 NACADO15069 1562 aa17.85■□□□□ 0.45
LINC00858-202ENST00000437892 DCAF8L2P0C7V8 631 aa17.74■□□□□ 0.43
LINC00858-202ENST00000437892 RB1CC1Q8TDY2 1594 aa17.67■□□□□ 0.42
LINC00858-202ENST00000437892 SHROOM4Q9ULL8 1493 aa17.62■□□□□ 0.41
LINC00858-202ENST00000437892 SCRIBQ14160 1630 aa17.5■□□□□ 0.39
LINC00858-202ENST00000437892 UNC13AQ9UPW8 1703 aa17.26■□□□□ 0.35
LINC00858-202ENST00000437892 BICRAQ9NZM4 1560 aa17.11■□□□□ 0.33
LINC00858-202ENST00000437892 MAPK8IP2Q13387 824 aaPredicted RBP17.1■□□□□ 0.33
LINC00858-202ENST00000437892 PPP4R3CPQ6ZMV5 832 aa17.1■□□□□ 0.33
LINC00858-202ENST00000437892 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
LINC00858-202ENST00000437892 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
LINC00858-202ENST00000437892 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.3
LINC00858-202ENST00000437892 BAZ1AQ9NRL2 1556 aaPredicted RBP16.95■□□□□ 0.3
LINC00858-202ENST00000437892 CECR2Q9BXF3 1484 aa16.93■□□□□ 0.3
LINC00858-202ENST00000437892 SUPT5HO00267 1087 aaKnown RBP16.92■□□□□ 0.3
LINC00858-202ENST00000437892 MROH2BQ7Z745 1585 aa16.88■□□□□ 0.29
LINC00858-202ENST00000437892 SMARCA4P51532 1647 aa16.86■□□□□ 0.29
LINC00858-202ENST00000437892 DMRT2Q9Y5R5 561 aa16.85■□□□□ 0.29
LINC00858-202ENST00000437892 PABPN1Q86U42 306 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC00858-202ENST00000437892 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
LINC00858-202ENST00000437892 WIZO95785 1651 aa16.72■□□□□ 0.27
LINC00858-202ENST00000437892 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
LINC00858-202ENST00000437892 CNKSR2Q8WXI2 1034 aa16.64■□□□□ 0.25
LINC00858-202ENST00000437892 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
LINC00858-202ENST00000437892 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
LINC00858-202ENST00000437892 ATAD2BQ9ULI0 1458 aa16.55■□□□□ 0.24
LINC00858-202ENST00000437892 KCNA4P22459 653 aa16.51■□□□□ 0.23
LINC00858-202ENST00000437892 HMGXB3Q12766 1538 aa16.49■□□□□ 0.23
LINC00858-202ENST00000437892 NCBP3Q53F19 620 aaKnown RBP16.46■□□□□ 0.23
LINC00858-202ENST00000437892 NCAPD3P42695 1498 aa16.45■□□□□ 0.22
LINC00858-202ENST00000437892 BAZ1BQ9UIG0 1483 aaKnown RBP16.45■□□□□ 0.22
LINC00858-202ENST00000437892 HOXD11P31277 338 aaPredicted RBP16.44■□□□□ 0.22
LINC00858-202ENST00000437892 RNF216Q9NWF9 866 aaPredicted RBP16.39■□□□□ 0.21
LINC00858-202ENST00000437892 CCDC88BA6NC98 1476 aa16.39■□□□□ 0.21
LINC00858-202ENST00000437892 NPM3O75607 178 aaKnown RBP16.38■□□□□ 0.21
LINC00858-202ENST00000437892 CC2D2AQ9P2K1 1620 aa16.3■□□□□ 0.2
LINC00858-202ENST00000437892 CFTRP13569 1480 aa16.08■□□□□ 0.16
LINC00858-202ENST00000437892 PRDM2Q13029 1718 aa16.05■□□□□ 0.16
LINC00858-202ENST00000437892 DNAJC5BQ9UF47 199 aa16.02■□□□□ 0.16
LINC00858-202ENST00000437892 ABCC8Q09428 1581 aa16■□□□□ 0.15
LINC00858-202ENST00000437892 TRIM41Q8WV44 630 aa16■□□□□ 0.15
LINC00858-202ENST00000437892 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
LINC00858-202ENST00000437892 WRNQ14191 1432 aaPredicted RBP eCLIP15.96■□□□□ 0.15
LINC00858-202ENST00000437892 DCAF8L1A6NGE4 600 aa15.95■□□□□ 0.14
LINC00858-202ENST00000437892 SYNJ1O43426 1573 aa15.91■□□□□ 0.14
LINC00858-202ENST00000437892 LAMC3Q9Y6N6 1575 aa15.91■□□□□ 0.14
LINC00858-202ENST00000437892 TOP2BQ02880 1626 aa15.9■□□□□ 0.14
LINC00858-202ENST00000437892 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
LINC00858-202ENST00000437892 EEA1Q15075 1411 aa15.83■□□□□ 0.12
LINC00858-202ENST00000437892 CUX1P39880 1505 aa15.81■□□□□ 0.12
LINC00858-202ENST00000437892 FANCD2Q9BXW9 1451 aa15.79■□□□□ 0.12
LINC00858-202ENST00000437892 NESP48681 1621 aa15.75■□□□□ 0.11
LINC00858-202ENST00000437892 PDS5BQ9NTI5 1447 aa15.73■□□□□ 0.11
LINC00858-202ENST00000437892 CEP164Q9UPV0 1460 aa15.71■□□□□ 0.11
LINC00858-202ENST00000437892 DNMBPQ6XZF7 1577 aa15.71■□□□□ 0.11
LINC00858-202ENST00000437892 SOGA1O94964 1423 aa15.69■□□□□ 0.1
LINC00858-202ENST00000437892 TOPBP1Q92547 1522 aa15.63■□□□□ 0.09
LINC00858-202ENST00000437892 KIF21AQ7Z4S6 1674 aa15.63■□□□□ 0.09
LINC00858-202ENST00000437892 KIF21BO75037 1637 aa15.62■□□□□ 0.09
LINC00858-202ENST00000437892 FGD5Q6ZNL6 1462 aa15.62■□□□□ 0.09
LINC00858-202ENST00000437892 URB2Q14146 1524 aaKnown RBP15.6■□□□□ 0.09
LINC00858-202ENST00000437892 RUSC2Q8N2Y8 1516 aa15.6■□□□□ 0.09
LINC00858-202ENST00000437892 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
LINC00858-202ENST00000437892 SLC4A1APQ9BWU0 796 aaKnown RBP15.59■□□□□ 0.09
LINC00858-202ENST00000437892 RNF39Q9H2S5 420 aa15.59■□□□□ 0.09
LINC00858-202ENST00000437892 FAM9AQ8IZU1 332 aaPredicted RBP15.57■□□□□ 0.08
LINC00858-202ENST00000437892 KIF27Q86VH2 1401 aa15.57■□□□□ 0.08
LINC00858-202ENST00000437892 LOC105371045A0A1W2PR82 267 aa15.56■□□□□ 0.08
LINC00858-202ENST00000437892 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
LINC00858-202ENST00000437892 POLA1P09884 1462 aaPredicted RBP15.56■□□□□ 0.08
LINC00858-202ENST00000437892 GOLGA3Q08378 1498 aa15.55■□□□□ 0.08
LINC00858-202ENST00000437892 MRC2Q9UBG0 1479 aa15.55■□□□□ 0.08
LINC00858-202ENST00000437892 ABCA10Q8WWZ4 1543 aa15.54■□□□□ 0.08
LINC00858-202ENST00000437892 WDR97A6NE52 1622 aa15.53■□□□□ 0.08
LINC00858-202ENST00000437892 ERICH3Q5RHP9 1530 aa15.53■□□□□ 0.08
LINC00858-202ENST00000437892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.51■□□□□ 0.07
LINC00858-202ENST00000437892 WDR62O43379 1518 aa15.5■□□□□ 0.07
LINC00858-202ENST00000437892 PRXQ9BXM0 1461 aa15.5■□□□□ 0.07
LINC00858-202ENST00000437892 CUX2O14529 1486 aa15.49■□□□□ 0.07
LINC00858-202ENST00000437892 TNIKQ9UKE5 1360 aa15.48■□□□□ 0.07
LINC00858-202ENST00000437892 THOC2Q8NI27 1593 aaKnown RBP15.45■□□□□ 0.06
LINC00858-202ENST00000437892 TARBP1Q13395 1621 aaKnown RBP15.43■□□□□ 0.06
LINC00858-202ENST00000437892 ABCA5Q8WWZ7 1642 aa15.43■□□□□ 0.06
LINC00858-202ENST00000437892 RAD54L2Q9Y4B4 1467 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms