RNA–Protein interactions for RNA: ENST00000437863.2

PTPN20-210, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5

Gene PTPN20, Length 3,125 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-210ENST00000437863 NISCHQ9Y2I1 1504 aa15.35■□□□□ 0.05
PTPN20-210ENST00000437863 CCDC180Q9P1Z9 1646 aa13.66□□□□□ -0.22
PTPN20-210ENST00000437863 DCAF1Q9Y4B6 1507 aa12.99□□□□□ -0.33
PTPN20-210ENST00000437863 ZCCHC6Q5VYS8 1495 aaKnown RBP12.98□□□□□ -0.33
PTPN20-210ENST00000437863 MYO15BQ96JP2 1530 aa12.85□□□□□ -0.35
PTPN20-210ENST00000437863 PELP1Q8IZL8 1130 aaKnown RBP12.81□□□□□ -0.36
PTPN20-210ENST00000437863 NACADO15069 1562 aa12.55□□□□□ -0.4
PTPN20-210ENST00000437863 MYT1Q01538 1121 aa12.44□□□□□ -0.42
PTPN20-210ENST00000437863 HRCP23327 699 aa12.44□□□□□ -0.42
PTPN20-210ENST00000437863 RB1CC1Q8TDY2 1594 aa12.35□□□□□ -0.43
PTPN20-210ENST00000437863 PPARGC1BQ86YN6 1023 aaKnown RBP12.33□□□□□ -0.44
PTPN20-210ENST00000437863 ABCC9O60706 1549 aa12.2□□□□□ -0.46
PTPN20-210ENST00000437863 SCAF1Q9H7N4 1312 aaKnown RBP12.18□□□□□ -0.46
PTPN20-210ENST00000437863 UNC13AQ9UPW8 1703 aa12.18□□□□□ -0.46
PTPN20-210ENST00000437863 SHROOM4Q9ULL8 1493 aa12.14□□□□□ -0.47
PTPN20-210ENST00000437863 SCRIBQ14160 1630 aa12.1□□□□□ -0.47
PTPN20-210ENST00000437863 PCGF6Q9BYE7 350 aa12.03□□□□□ -0.48
PTPN20-210ENST00000437863 BICRAQ9NZM4 1560 aa11.95□□□□□ -0.5
PTPN20-210ENST00000437863 BAZ1AQ9NRL2 1556 aaPredicted RBP11.89□□□□□ -0.51
PTPN20-210ENST00000437863 PEG3Q9GZU2 1588 aa11.86□□□□□ -0.51
PTPN20-210ENST00000437863 DCAF8L2P0C7V8 631 aa11.85□□□□□ -0.51
PTPN20-210ENST00000437863 SMARCA4P51532 1647 aa11.82□□□□□ -0.52
PTPN20-210ENST00000437863 RSF1Q96T23 1441 aaPredicted RBP11.81□□□□□ -0.52
PTPN20-210ENST00000437863 TTBK1Q5TCY1 1321 aaPredicted RBP11.8□□□□□ -0.52
PTPN20-210ENST00000437863 PRKCSHP14314 528 aaPredicted RBP11.79□□□□□ -0.52
PTPN20-210ENST00000437863 BCL11AQ9H165 835 aa11.77□□□□□ -0.52
PTPN20-210ENST00000437863 MROH2BQ7Z745 1585 aa11.73□□□□□ -0.53
PTPN20-210ENST00000437863 TOP2AP11388 1531 aaKnown RBP11.71□□□□□ -0.54
PTPN20-210ENST00000437863 CECR2Q9BXF3 1484 aa11.69□□□□□ -0.54
PTPN20-210ENST00000437863 FAM9AQ8IZU1 332 aaPredicted RBP11.69□□□□□ -0.54
PTPN20-210ENST00000437863 SMARCA2P51531 1590 aa11.67□□□□□ -0.54
PTPN20-210ENST00000437863 WIZO95785 1651 aa11.67□□□□□ -0.54
PTPN20-210ENST00000437863 GTF3C3Q9Y5Q9 886 aa11.66□□□□□ -0.54
PTPN20-210ENST00000437863 EIF4G1Q04637 1599 aaKnown RBP11.66□□□□□ -0.54
PTPN20-210ENST00000437863 NEUROD1Q13562 356 aa11.64□□□□□ -0.55
PTPN20-210ENST00000437863 ACIN1Q9UKV3 1341 aaKnown RBP11.63□□□□□ -0.55
PTPN20-210ENST00000437863 HMGXB3Q12766 1538 aa11.59□□□□□ -0.55
PTPN20-210ENST00000437863 CENPBP07199 599 aaPredicted RBP11.55□□□□□ -0.56
PTPN20-210ENST00000437863 SUPT5HO00267 1087 aaKnown RBP11.51□□□□□ -0.57
PTPN20-210ENST00000437863 PRDM2Q13029 1718 aa11.5□□□□□ -0.57
PTPN20-210ENST00000437863 ATAD2BQ9ULI0 1458 aa11.5□□□□□ -0.57
PTPN20-210ENST00000437863 NCAPD3P42695 1498 aa11.48□□□□□ -0.57
PTPN20-210ENST00000437863 CCDC88BA6NC98 1476 aa11.4□□□□□ -0.58
PTPN20-210ENST00000437863 ZEB1P37275 1124 aaPredicted RBP11.4□□□□□ -0.59
PTPN20-210ENST00000437863 BAZ1BQ9UIG0 1483 aaKnown RBP11.39□□□□□ -0.59
PTPN20-210ENST00000437863 ERICH6Q7L0X2 663 aa11.37□□□□□ -0.59
PTPN20-210ENST00000437863 CHIC1Q5VXU3 224 aa11.34□□□□□ -0.59
PTPN20-210ENST00000437863 TRIM26Q12899 539 aaPredicted RBP11.32□□□□□ -0.6
PTPN20-210ENST00000437863 ANP32EQ9BTT0 268 aa11.31□□□□□ -0.6
PTPN20-210ENST00000437863 CSRNP3Q8WYN3 585 aa11.29□□□□□ -0.6
PTPN20-210ENST00000437863 PABPN1Q86U42 306 aaKnown RBP eCLIP11.29□□□□□ -0.6
PTPN20-210ENST00000437863 BIVM-ERCC5R4GMW8 1640 aa11.28□□□□□ -0.6
PTPN20-210ENST00000437863 CC2D2AQ9P2K1 1620 aa11.28□□□□□ -0.6
PTPN20-210ENST00000437863 APLP2Q06481 763 aa11.27□□□□□ -0.61
PTPN20-210ENST00000437863 CFTRP13569 1480 aa11.21□□□□□ -0.61
PTPN20-210ENST00000437863 YTHDC1Q96MU7 727 aaKnown RBP11.21□□□□□ -0.62
PTPN20-210ENST00000437863 TOP2BQ02880 1626 aa11.2□□□□□ -0.62
PTPN20-210ENST00000437863 EEA1Q15075 1411 aa11.2□□□□□ -0.62
PTPN20-210ENST00000437863 LOC105371045A0A1W2PR82 267 aa11.16□□□□□ -0.62
PTPN20-210ENST00000437863 DIEXFQ68CQ4 756 aaKnown RBP11.15□□□□□ -0.62
PTPN20-210ENST00000437863 LAMC3Q9Y6N6 1575 aa11.15□□□□□ -0.62
PTPN20-210ENST00000437863 SYNJ1O43426 1573 aa11.11□□□□□ -0.63
PTPN20-210ENST00000437863 WRNQ14191 1432 aaPredicted RBP eCLIP11.09□□□□□ -0.63
PTPN20-210ENST00000437863 KIF21BO75037 1637 aa11.09□□□□□ -0.63
PTPN20-210ENST00000437863 ABCC8Q09428 1581 aa11.08□□□□□ -0.64
PTPN20-210ENST00000437863 CADPSQ9ULU8 1353 aa11.05□□□□□ -0.64
PTPN20-210ENST00000437863 ANO8Q9HCE9 1232 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-210ENST00000437863 WDR97A6NE52 1622 aa11.01□□□□□ -0.65
PTPN20-210ENST00000437863 CUX1P39880 1505 aa11.01□□□□□ -0.65
PTPN20-210ENST00000437863 DNMBPQ6XZF7 1577 aa11.01□□□□□ -0.65
PTPN20-210ENST00000437863 TRIM41Q8WV44 630 aa11□□□□□ -0.65
PTPN20-210ENST00000437863 TSHZ2Q9NRE2 1034 aa11□□□□□ -0.65
PTPN20-210ENST00000437863 ERICH3Q5RHP9 1530 aa11□□□□□ -0.65
PTPN20-210ENST00000437863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.93□□□□□ -0.66
PTPN20-210ENST00000437863 FANCD2Q9BXW9 1451 aa10.91□□□□□ -0.66
PTPN20-210ENST00000437863 CEP164Q9UPV0 1460 aa10.91□□□□□ -0.66
PTPN20-210ENST00000437863 KIF21AQ7Z4S6 1674 aa10.9□□□□□ -0.66
PTPN20-210ENST00000437863 CCER1Q8TC90 406 aaPredicted RBP10.9□□□□□ -0.66
PTPN20-210ENST00000437863 GOLGA3Q08378 1498 aa10.89□□□□□ -0.67
PTPN20-210ENST00000437863 CUL7Q14999 1698 aa10.89□□□□□ -0.67
PTPN20-210ENST00000437863 SUPT16HQ9Y5B9 1047 aaKnown RBP10.89□□□□□ -0.67
PTPN20-210ENST00000437863 ABCA10Q8WWZ4 1543 aa10.88□□□□□ -0.67
PTPN20-210ENST00000437863 TNIKQ9UKE5 1360 aa10.88□□□□□ -0.67
PTPN20-210ENST00000437863 CCDC136Q96JN2 1154 aa10.87□□□□□ -0.67
PTPN20-210ENST00000437863 PDS5BQ9NTI5 1447 aa10.87□□□□□ -0.67
PTPN20-210ENST00000437863 PRXQ9BXM0 1461 aa10.87□□□□□ -0.67
PTPN20-210ENST00000437863 TOPBP1Q92547 1522 aa10.86□□□□□ -0.67
PTPN20-210ENST00000437863 ABCA5Q8WWZ7 1642 aa10.86□□□□□ -0.67
PTPN20-210ENST00000437863 SOGA1O94964 1423 aa10.85□□□□□ -0.67
PTPN20-210ENST00000437863 KIF27Q86VH2 1401 aa10.83□□□□□ -0.68
PTPN20-210ENST00000437863 WDR62O43379 1518 aa10.83□□□□□ -0.68
PTPN20-210ENST00000437863 MIER1Q8N108 512 aa10.82□□□□□ -0.68
PTPN20-210ENST00000437863 SALL2Q9Y467 1007 aaPredicted RBP10.82□□□□□ -0.68
PTPN20-210ENST00000437863 TARBP1Q13395 1621 aaKnown RBP10.82□□□□□ -0.68
PTPN20-210ENST00000437863 FGD5Q6ZNL6 1462 aa10.82□□□□□ -0.68
PTPN20-210ENST00000437863 URB2Q14146 1524 aaKnown RBP10.8□□□□□ -0.68
PTPN20-210ENST00000437863 RUSC2Q8N2Y8 1516 aa10.79□□□□□ -0.68
PTPN20-210ENST00000437863 POLA1P09884 1462 aaPredicted RBP10.78□□□□□ -0.68
PTPN20-210ENST00000437863 MRC2Q9UBG0 1479 aa10.78□□□□□ -0.68
PTPN20-210ENST00000437863 THOC2Q8NI27 1593 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms