RNA–Protein interactions for RNA: ENST00000436652.1

C1orf53-202, Transcript of chromosome 1 open reading frame 53, humanhuman

TSL 3

Gene C1orf53, Length 394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf53-202ENST00000436652 AEBP2Q6ZN18 517 aaPredicted RBP29.48■■■□□ 2.31
C1orf53-202ENST00000436652 CHIC1Q5VXU3 224 aa27.87■■■□□ 2.05
C1orf53-202ENST00000436652 SENP3Q9H4L4 574 aaPredicted RBP25.41■■□□□ 1.66
C1orf53-202ENST00000436652 PHF23Q9BUL5 403 aaPredicted RBP24.94■■□□□ 1.58
C1orf53-202ENST00000436652 FOXD1Q16676 465 aa23.57■■□□□ 1.36
C1orf53-202ENST00000436652 NISCHQ9Y2I1 1504 aa22.81■■□□□ 1.24
C1orf53-202ENST00000436652 MSH5O43196 834 aa22.34■■□□□ 1.17
C1orf53-202ENST00000436652 PLPPR3Q6T4P5 718 aa22.23■■□□□ 1.15
C1orf53-202ENST00000436652 POTEDQ86YR6 584 aa22.1■■□□□ 1.13
C1orf53-202ENST00000436652 PIAS4Q8N2W9 510 aaPredicted RBP22.03■■□□□ 1.12
C1orf53-202ENST00000436652 ABCC9O60706 1549 aa21.9■■□□□ 1.1
C1orf53-202ENST00000436652 PPP6R1Q9UPN7 881 aa21.75■■□□□ 1.07
C1orf53-202ENST00000436652 ADRA2BP18089 450 aa21.7■■□□□ 1.06
C1orf53-202ENST00000436652 DNAJC5BQ9UF47 199 aa21.5■■□□□ 1.03
C1orf53-202ENST00000436652 CCDC180Q9P1Z9 1646 aa20.72■□□□□ 0.91
C1orf53-202ENST00000436652 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
C1orf53-202ENST00000436652 DNAJC5Q9H3Z4 198 aa20.28■□□□□ 0.84
C1orf53-202ENST00000436652 RB1CC1Q8TDY2 1594 aa20.25■□□□□ 0.83
C1orf53-202ENST00000436652 SCAF1Q9H7N4 1312 aaKnown RBP20.11■□□□□ 0.81
C1orf53-202ENST00000436652 DMRT2Q9Y5R5 561 aa20.05■□□□□ 0.8
C1orf53-202ENST00000436652 MAPK8IP2Q13387 824 aaPredicted RBP19.97■□□□□ 0.79
C1orf53-202ENST00000436652 NACADO15069 1562 aa19.87■□□□□ 0.77
C1orf53-202ENST00000436652 UNC13AQ9UPW8 1703 aa19.82■□□□□ 0.76
C1orf53-202ENST00000436652 DCAF8L2P0C7V8 631 aa19.81■□□□□ 0.76
C1orf53-202ENST00000436652 BICRAQ9NZM4 1560 aa19.81■□□□□ 0.76
C1orf53-202ENST00000436652 CECR2Q9BXF3 1484 aa19.77■□□□□ 0.76
C1orf53-202ENST00000436652 CC2D2AQ9P2K1 1620 aa19.65■□□□□ 0.74
C1orf53-202ENST00000436652 PPP4R3CPQ6ZMV5 832 aa19.37■□□□□ 0.69
C1orf53-202ENST00000436652 EIF4G1Q04637 1599 aaKnown RBP19.36■□□□□ 0.69
C1orf53-202ENST00000436652 CACNB1Q02641 598 aaPredicted RBP19.27■□□□□ 0.68
C1orf53-202ENST00000436652 DCAF8L1A6NGE4 600 aa19.23■□□□□ 0.67
C1orf53-202ENST00000436652 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
C1orf53-202ENST00000436652 MYO15BQ96JP2 1530 aa19.22■□□□□ 0.67
C1orf53-202ENST00000436652 HOXD11P31277 338 aaPredicted RBP19.21■□□□□ 0.67
C1orf53-202ENST00000436652 CNKSR2Q8WXI2 1034 aa19.14■□□□□ 0.65
C1orf53-202ENST00000436652 CUX2O14529 1486 aa19.1■□□□□ 0.65
C1orf53-202ENST00000436652 TRIM41Q8WV44 630 aa19.1■□□□□ 0.65
C1orf53-202ENST00000436652 RNF216Q9NWF9 866 aaPredicted RBP19.03■□□□□ 0.64
C1orf53-202ENST00000436652 SCRIBQ14160 1630 aa19.03■□□□□ 0.64
C1orf53-202ENST00000436652 RNF39Q9H2S5 420 aa18.95■□□□□ 0.62
C1orf53-202ENST00000436652 ERCC6Q03468 1493 aa18.9■□□□□ 0.62
C1orf53-202ENST00000436652 C1QBPQ07021 282 aaKnown RBP18.74■□□□□ 0.59
C1orf53-202ENST00000436652 ZCCHC6Q5VYS8 1495 aaKnown RBP18.7■□□□□ 0.58
C1orf53-202ENST00000436652 NCBP3Q53F19 620 aaKnown RBP18.69■□□□□ 0.58
C1orf53-202ENST00000436652 DCAF1Q9Y4B6 1507 aa18.66■□□□□ 0.58
C1orf53-202ENST00000436652 NESP48681 1621 aa18.58■□□□□ 0.56
C1orf53-202ENST00000436652 THOC2Q8NI27 1593 aaKnown RBP18.46■□□□□ 0.55
C1orf53-202ENST00000436652 NCAPD3P42695 1498 aa18.41■□□□□ 0.54
C1orf53-202ENST00000436652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.34■□□□□ 0.53
C1orf53-202ENST00000436652 SMARCA2P51531 1590 aa18.34■□□□□ 0.53
C1orf53-202ENST00000436652 ATAD2BQ9ULI0 1458 aa18.27■□□□□ 0.52
C1orf53-202ENST00000436652 NPM3O75607 178 aaKnown RBP18.24■□□□□ 0.51
C1orf53-202ENST00000436652 KIF21AQ7Z4S6 1674 aa18.18■□□□□ 0.5
C1orf53-202ENST00000436652 HMGXB3Q12766 1538 aa18.14■□□□□ 0.49
C1orf53-202ENST00000436652 BAZ1AQ9NRL2 1556 aaPredicted RBP18.14■□□□□ 0.49
C1orf53-202ENST00000436652 OSCARQ8IYS5 282 aa18.14■□□□□ 0.49
C1orf53-202ENST00000436652 LAMC3Q9Y6N6 1575 aa18.08■□□□□ 0.49
C1orf53-202ENST00000436652 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
C1orf53-202ENST00000436652 BAZ1BQ9UIG0 1483 aaKnown RBP18.02■□□□□ 0.48
C1orf53-202ENST00000436652 RIMBP3CA6NJZ7 1639 aa18.02■□□□□ 0.48
C1orf53-202ENST00000436652 RIMBP3BA6NNM3 1639 aa18.02■□□□□ 0.48
C1orf53-202ENST00000436652 RIMBP3Q9UFD9 1639 aa18.02■□□□□ 0.48
C1orf53-202ENST00000436652 MRC2Q9UBG0 1479 aa18■□□□□ 0.47
C1orf53-202ENST00000436652 SMARCA4P51532 1647 aa17.98■□□□□ 0.47
C1orf53-202ENST00000436652 TRHP20396 242 aaPredicted RBP17.97■□□□□ 0.47
C1orf53-202ENST00000436652 WDR62O43379 1518 aa17.97■□□□□ 0.47
C1orf53-202ENST00000436652 CYB5RLQ6IPT4 315 aa17.88■□□□□ 0.45
C1orf53-202ENST00000436652 ARHGEF11O15085 1522 aa17.88■□□□□ 0.45
C1orf53-202ENST00000436652 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
C1orf53-202ENST00000436652 U3KPZ7 1027 aaPredicted RBP17.83■□□□□ 0.44
C1orf53-202ENST00000436652 PEG3Q9GZU2 1588 aa17.74■□□□□ 0.43
C1orf53-202ENST00000436652 CEP164Q9UPV0 1460 aa17.72■□□□□ 0.43
C1orf53-202ENST00000436652 CAPN15O75808 1086 aa17.7■□□□□ 0.42
C1orf53-202ENST00000436652 ARAP1Q96P48 1450 aa17.69■□□□□ 0.42
C1orf53-202ENST00000436652 FANCD2Q9BXW9 1451 aa17.66■□□□□ 0.42
C1orf53-202ENST00000436652 MROH2BQ7Z745 1585 aa17.63■□□□□ 0.41
C1orf53-202ENST00000436652 DSG3P32926 999 aa17.63■□□□□ 0.41
C1orf53-202ENST00000436652 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
C1orf53-202ENST00000436652 KCNA4P22459 653 aa17.61■□□□□ 0.41
C1orf53-202ENST00000436652 SPINK5Q9NQ38 1064 aaPredicted RBP17.61■□□□□ 0.41
C1orf53-202ENST00000436652 ZNF608Q9ULD9 1512 aaPredicted RBP17.59■□□□□ 0.41
C1orf53-202ENST00000436652 APLP2Q06481 763 aa17.58■□□□□ 0.4
C1orf53-202ENST00000436652 ILDR1Q86SU0 546 aaPredicted RBP17.57■□□□□ 0.4
C1orf53-202ENST00000436652 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.46■□□□□ 0.39
C1orf53-202ENST00000436652 HNRNPUL2Q1KMD3 747 aaKnown RBP17.46■□□□□ 0.39
C1orf53-202ENST00000436652 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
C1orf53-202ENST00000436652 CFTRP13569 1480 aa17.43■□□□□ 0.38
C1orf53-202ENST00000436652 ZNF219Q9P2Y4 722 aaPredicted RBP17.4■□□□□ 0.38
C1orf53-202ENST00000436652 IFT140Q96RY7 1462 aa17.39■□□□□ 0.37
C1orf53-202ENST00000436652 RSF1Q96T23 1441 aaPredicted RBP17.38■□□□□ 0.37
C1orf53-202ENST00000436652 FBLN2P98095 1184 aa17.38■□□□□ 0.37
C1orf53-202ENST00000436652 CHD1O14646 1710 aa17.37■□□□□ 0.37
C1orf53-202ENST00000436652 WIZO95785 1651 aa17.36■□□□□ 0.37
C1orf53-202ENST00000436652 EIF4G3O43432 1585 aaKnown RBP17.34■□□□□ 0.37
C1orf53-202ENST00000436652 POTEHQ6S545 545 aa17.32■□□□□ 0.36
C1orf53-202ENST00000436652 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.36
C1orf53-202ENST00000436652 SAMD1Q6SPF0 538 aaPredicted RBP17.29■□□□□ 0.36
C1orf53-202ENST00000436652 TOPBP1Q92547 1522 aa17.21■□□□□ 0.35
C1orf53-202ENST00000436652 ABCB7O75027 752 aa17.19■□□□□ 0.34
C1orf53-202ENST00000436652 CLASP1Q7Z460 1538 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms