RNA–Protein interactions for RNA: ENST00000434810.5

CHEK2-215, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-215ENST00000434810 AEBP2Q6ZN18 517 aaPredicted RBP24.59■■□□□ 1.53
CHEK2-215ENST00000434810 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
CHEK2-215ENST00000434810 NISCHQ9Y2I1 1504 aa21.51■■□□□ 1.03
CHEK2-215ENST00000434810 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
CHEK2-215ENST00000434810 PHF23Q9BUL5 403 aaPredicted RBP20.73■□□□□ 0.91
CHEK2-215ENST00000434810 FOXD1Q16676 465 aa19.72■□□□□ 0.75
CHEK2-215ENST00000434810 POTEDQ86YR6 584 aa19.31■□□□□ 0.68
CHEK2-215ENST00000434810 ABCC9O60706 1549 aa19.3■□□□□ 0.68
CHEK2-215ENST00000434810 CCDC180Q9P1Z9 1646 aa19.18■□□□□ 0.66
CHEK2-215ENST00000434810 MSH5O43196 834 aa18.74■□□□□ 0.59
CHEK2-215ENST00000434810 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
CHEK2-215ENST00000434810 PIAS4Q8N2W9 510 aaPredicted RBP18.27■□□□□ 0.52
CHEK2-215ENST00000434810 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
CHEK2-215ENST00000434810 NACADO15069 1562 aa18.17■□□□□ 0.5
CHEK2-215ENST00000434810 DNAJC5BQ9UF47 199 aa18.15■□□□□ 0.5
CHEK2-215ENST00000434810 ZCCHC6Q5VYS8 1495 aaKnown RBP18.13■□□□□ 0.49
CHEK2-215ENST00000434810 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
CHEK2-215ENST00000434810 PPP6R1Q9UPN7 881 aa17.96■□□□□ 0.47
CHEK2-215ENST00000434810 PLPPR3Q6T4P5 718 aa17.93■□□□□ 0.46
CHEK2-215ENST00000434810 DCAF1Q9Y4B6 1507 aa17.91■□□□□ 0.46
CHEK2-215ENST00000434810 UNC13AQ9UPW8 1703 aa17.89■□□□□ 0.46
CHEK2-215ENST00000434810 ADRA2BP18089 450 aa17.85■□□□□ 0.45
CHEK2-215ENST00000434810 MYO15BQ96JP2 1530 aa17.81■□□□□ 0.44
CHEK2-215ENST00000434810 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
CHEK2-215ENST00000434810 SHROOM4Q9ULL8 1493 aa17.5■□□□□ 0.39
CHEK2-215ENST00000434810 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
CHEK2-215ENST00000434810 CC2D2AQ9P2K1 1620 aa17.42■□□□□ 0.38
CHEK2-215ENST00000434810 CECR2Q9BXF3 1484 aa17.4■□□□□ 0.38
CHEK2-215ENST00000434810 EIF4G1Q04637 1599 aaKnown RBP17.33■□□□□ 0.37
CHEK2-215ENST00000434810 DNAJC5Q9H3Z4 198 aa16.83■□□□□ 0.28
CHEK2-215ENST00000434810 SUPT5HO00267 1087 aaKnown RBP16.77■□□□□ 0.28
CHEK2-215ENST00000434810 ERCC6Q03468 1493 aa16.75■□□□□ 0.27
CHEK2-215ENST00000434810 NCAPD3P42695 1498 aa16.73■□□□□ 0.27
CHEK2-215ENST00000434810 CUX2O14529 1486 aa16.68■□□□□ 0.26
CHEK2-215ENST00000434810 SMARCA2P51531 1590 aa16.67■□□□□ 0.26
CHEK2-215ENST00000434810 ATAD2BQ9ULI0 1458 aa16.66■□□□□ 0.26
CHEK2-215ENST00000434810 BAZ1AQ9NRL2 1556 aaPredicted RBP16.65■□□□□ 0.26
CHEK2-215ENST00000434810 RSF1Q96T23 1441 aaPredicted RBP16.65■□□□□ 0.26
CHEK2-215ENST00000434810 DMRT2Q9Y5R5 561 aa16.64■□□□□ 0.25
CHEK2-215ENST00000434810 SMARCA4P51532 1647 aa16.63■□□□□ 0.25
CHEK2-215ENST00000434810 HMGXB3Q12766 1538 aa16.6■□□□□ 0.25
CHEK2-215ENST00000434810 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
CHEK2-215ENST00000434810 MROH2BQ7Z745 1585 aa16.56■□□□□ 0.24
CHEK2-215ENST00000434810 BAZ1BQ9UIG0 1483 aaKnown RBP16.55■□□□□ 0.24
CHEK2-215ENST00000434810 NESP48681 1621 aa16.51■□□□□ 0.23
CHEK2-215ENST00000434810 WIZO95785 1651 aa16.5■□□□□ 0.23
CHEK2-215ENST00000434810 CACNB1Q02641 598 aaPredicted RBP16.43■□□□□ 0.22
CHEK2-215ENST00000434810 LAMC3Q9Y6N6 1575 aa16.43■□□□□ 0.22
CHEK2-215ENST00000434810 PEG3Q9GZU2 1588 aa16.42■□□□□ 0.22
CHEK2-215ENST00000434810 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
CHEK2-215ENST00000434810 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
CHEK2-215ENST00000434810 TOP2AP11388 1531 aaKnown RBP16.37■□□□□ 0.21
CHEK2-215ENST00000434810 THOC2Q8NI27 1593 aaKnown RBP16.34■□□□□ 0.21
CHEK2-215ENST00000434810 KIF21AQ7Z4S6 1674 aa16.34■□□□□ 0.21
CHEK2-215ENST00000434810 CADPSQ9ULU8 1353 aa16.26■□□□□ 0.19
CHEK2-215ENST00000434810 MRC2Q9UBG0 1479 aa16.18■□□□□ 0.18
CHEK2-215ENST00000434810 TRIM41Q8WV44 630 aa16.14■□□□□ 0.17
CHEK2-215ENST00000434810 CEP164Q9UPV0 1460 aa16.12■□□□□ 0.17
CHEK2-215ENST00000434810 WDR62O43379 1518 aa16.11■□□□□ 0.17
CHEK2-215ENST00000434810 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
CHEK2-215ENST00000434810 FANCD2Q9BXW9 1451 aa16.07■□□□□ 0.16
CHEK2-215ENST00000434810 CFTRP13569 1480 aa16■□□□□ 0.15
CHEK2-215ENST00000434810 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
CHEK2-215ENST00000434810 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
CHEK2-215ENST00000434810 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
CHEK2-215ENST00000434810 RNF39Q9H2S5 420 aa15.92■□□□□ 0.14
CHEK2-215ENST00000434810 URB2Q14146 1524 aaKnown RBP15.89■□□□□ 0.13
CHEK2-215ENST00000434810 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
CHEK2-215ENST00000434810 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
CHEK2-215ENST00000434810 IFT140Q96RY7 1462 aa15.79■□□□□ 0.12
CHEK2-215ENST00000434810 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
CHEK2-215ENST00000434810 ZNF608Q9ULD9 1512 aaPredicted RBP15.72■□□□□ 0.11
CHEK2-215ENST00000434810 RIMBP3CA6NJZ7 1639 aa15.71■□□□□ 0.11
CHEK2-215ENST00000434810 RIMBP3BA6NNM3 1639 aa15.71■□□□□ 0.11
CHEK2-215ENST00000434810 RIMBP3Q9UFD9 1639 aa15.71■□□□□ 0.11
CHEK2-215ENST00000434810 BIVM-ERCC5R4GMW8 1640 aa15.71■□□□□ 0.11
CHEK2-215ENST00000434810 WRNQ14191 1432 aaPredicted RBP eCLIP15.7■□□□□ 0.1
CHEK2-215ENST00000434810 DNMBPQ6XZF7 1577 aa15.68■□□□□ 0.1
CHEK2-215ENST00000434810 FBLN2P98095 1184 aa15.68■□□□□ 0.1
CHEK2-215ENST00000434810 C1QBPQ07021 282 aaKnown RBP15.68■□□□□ 0.1
CHEK2-215ENST00000434810 SYNJ1O43426 1573 aa15.67■□□□□ 0.1
CHEK2-215ENST00000434810 TOP2BQ02880 1626 aa15.67■□□□□ 0.1
CHEK2-215ENST00000434810 EIF4G3O43432 1585 aaKnown RBP15.66■□□□□ 0.1
CHEK2-215ENST00000434810 EEA1Q15075 1411 aa15.65■□□□□ 0.1
CHEK2-215ENST00000434810 CYB5RLQ6IPT4 315 aa15.63■□□□□ 0.09
CHEK2-215ENST00000434810 ARHGEF11O15085 1522 aa15.63■□□□□ 0.09
CHEK2-215ENST00000434810 AQRO60306 1485 aaKnown RBP eCLIP15.61■□□□□ 0.09
CHEK2-215ENST00000434810 CHD1O14646 1710 aa15.61■□□□□ 0.09
CHEK2-215ENST00000434810 PPP4R3CPQ6ZMV5 832 aa15.61■□□□□ 0.09
CHEK2-215ENST00000434810 TARBP1Q13395 1621 aaKnown RBP15.57■□□□□ 0.08
CHEK2-215ENST00000434810 TRHP20396 242 aaPredicted RBP15.57■□□□□ 0.08
CHEK2-215ENST00000434810 POLA1P09884 1462 aaPredicted RBP15.55■□□□□ 0.08
CHEK2-215ENST00000434810 SOGA1O94964 1423 aa15.55■□□□□ 0.08
CHEK2-215ENST00000434810 RAD54L2Q9Y4B4 1467 aa15.52■□□□□ 0.07
CHEK2-215ENST00000434810 TDRD9Q8NDG6 1382 aaKnown RBP15.51■□□□□ 0.07
CHEK2-215ENST00000434810 CHMP7Q8WUX9 453 aaPredicted RBP15.51■□□□□ 0.07
CHEK2-215ENST00000434810 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
CHEK2-215ENST00000434810 CUX1P39880 1505 aa15.5■□□□□ 0.07
CHEK2-215ENST00000434810 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
CHEK2-215ENST00000434810 KIF21BO75037 1637 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms