RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 AEBP2Q6ZN18 517 aaPredicted RBP26.28■■□□□ 1.8
CDH13-203ENST00000431540 CHIC1Q5VXU3 224 aa24.56■■□□□ 1.52
CDH13-203ENST00000431540 SENP3Q9H4L4 574 aaPredicted RBP22.56■■□□□ 1.2
CDH13-203ENST00000431540 PHF23Q9BUL5 403 aaPredicted RBP22.15■■□□□ 1.14
CDH13-203ENST00000431540 FOXD1Q16676 465 aa21.12■□□□□ 0.97
CDH13-203ENST00000431540 POTEDQ86YR6 584 aa21.01■□□□□ 0.95
CDH13-203ENST00000431540 NISCHQ9Y2I1 1504 aa20.9■□□□□ 0.94
CDH13-203ENST00000431540 MSH5O43196 834 aa20.1■□□□□ 0.81
CDH13-203ENST00000431540 PIAS4Q8N2W9 510 aaPredicted RBP19.52■□□□□ 0.72
CDH13-203ENST00000431540 PPP6R1Q9UPN7 881 aa19.12■□□□□ 0.65
CDH13-203ENST00000431540 ADRA2BP18089 450 aa18.99■□□□□ 0.63
CDH13-203ENST00000431540 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
CDH13-203ENST00000431540 CCDC180Q9P1Z9 1646 aa18.91■□□□□ 0.62
CDH13-203ENST00000431540 ABCC9O60706 1549 aa18.75■□□□□ 0.59
CDH13-203ENST00000431540 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
CDH13-203ENST00000431540 NACADO15069 1562 aa17.9■□□□□ 0.46
CDH13-203ENST00000431540 DMRT2Q9Y5R5 561 aa17.76■□□□□ 0.43
CDH13-203ENST00000431540 CACNB1Q02641 598 aaPredicted RBP17.73■□□□□ 0.43
CDH13-203ENST00000431540 MYO15BQ96JP2 1530 aa17.72■□□□□ 0.43
CDH13-203ENST00000431540 MAPK8IP2Q13387 824 aaPredicted RBP17.7■□□□□ 0.42
CDH13-203ENST00000431540 DNAJC5BQ9UF47 199 aa17.7■□□□□ 0.42
CDH13-203ENST00000431540 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
CDH13-203ENST00000431540 DCAF8L2P0C7V8 631 aa17.52■□□□□ 0.4
CDH13-203ENST00000431540 PABPN1Q86U42 306 aaKnown RBP eCLIP17.41■□□□□ 0.38
CDH13-203ENST00000431540 DCAF1Q9Y4B6 1507 aa17.41■□□□□ 0.38
CDH13-203ENST00000431540 SCAF1Q9H7N4 1312 aaKnown RBP17.4■□□□□ 0.38
CDH13-203ENST00000431540 BICRAQ9NZM4 1560 aa17.4■□□□□ 0.38
CDH13-203ENST00000431540 SHROOM4Q9ULL8 1493 aa17.37■□□□□ 0.37
CDH13-203ENST00000431540 ZCCHC6Q5VYS8 1495 aaKnown RBP17.27■□□□□ 0.36
CDH13-203ENST00000431540 RNF39Q9H2S5 420 aa17.07■□□□□ 0.32
CDH13-203ENST00000431540 DCAF8L1A6NGE4 600 aa17.04■□□□□ 0.32
CDH13-203ENST00000431540 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
CDH13-203ENST00000431540 EIF4G1Q04637 1599 aaKnown RBP16.99■□□□□ 0.31
CDH13-203ENST00000431540 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
CDH13-203ENST00000431540 SCRIBQ14160 1630 aa16.96■□□□□ 0.31
CDH13-203ENST00000431540 HOXD11P31277 338 aaPredicted RBP16.79■□□□□ 0.28
CDH13-203ENST00000431540 C1QBPQ07021 282 aaKnown RBP16.78■□□□□ 0.28
CDH13-203ENST00000431540 NCAPD3P42695 1498 aa16.51■□□□□ 0.23
CDH13-203ENST00000431540 DNAJC5Q9H3Z4 198 aa16.5■□□□□ 0.23
CDH13-203ENST00000431540 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
CDH13-203ENST00000431540 RNF216Q9NWF9 866 aaPredicted RBP16.45■□□□□ 0.22
CDH13-203ENST00000431540 CUX2O14529 1486 aa16.41■□□□□ 0.22
CDH13-203ENST00000431540 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
CDH13-203ENST00000431540 SMARCA2P51531 1590 aa16.38■□□□□ 0.21
CDH13-203ENST00000431540 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
CDH13-203ENST00000431540 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
CDH13-203ENST00000431540 POTEHQ6S545 545 aa16.31■□□□□ 0.2
CDH13-203ENST00000431540 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
CDH13-203ENST00000431540 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
CDH13-203ENST00000431540 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
CDH13-203ENST00000431540 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
CDH13-203ENST00000431540 BAZ1BQ9UIG0 1483 aaKnown RBP16.17■□□□□ 0.18
CDH13-203ENST00000431540 LAMC3Q9Y6N6 1575 aa16.15■□□□□ 0.18
CDH13-203ENST00000431540 NESP48681 1621 aa16.06■□□□□ 0.16
CDH13-203ENST00000431540 PDS5BQ9NTI5 1447 aa16.05■□□□□ 0.16
CDH13-203ENST00000431540 THOC2Q8NI27 1593 aaKnown RBP16.02■□□□□ 0.16
CDH13-203ENST00000431540 MROH2BQ7Z745 1585 aa16.01■□□□□ 0.15
CDH13-203ENST00000431540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.15
CDH13-203ENST00000431540 CADPSQ9ULU8 1353 aa15.96■□□□□ 0.15
CDH13-203ENST00000431540 KIF21AQ7Z4S6 1674 aa15.95■□□□□ 0.14
CDH13-203ENST00000431540 MRC2Q9UBG0 1479 aa15.84■□□□□ 0.13
CDH13-203ENST00000431540 WDR62O43379 1518 aa15.83■□□□□ 0.12
CDH13-203ENST00000431540 WIZO95785 1651 aa15.82■□□□□ 0.12
CDH13-203ENST00000431540 CFTRP13569 1480 aa15.76■□□□□ 0.11
CDH13-203ENST00000431540 CEP164Q9UPV0 1460 aa15.75■□□□□ 0.11
CDH13-203ENST00000431540 DSG3P32926 999 aa15.71■□□□□ 0.11
CDH13-203ENST00000431540 FANCD2Q9BXW9 1451 aa15.71■□□□□ 0.1
CDH13-203ENST00000431540 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
CDH13-203ENST00000431540 PRDM2Q13029 1718 aa15.67■□□□□ 0.1
CDH13-203ENST00000431540 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
CDH13-203ENST00000431540 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
CDH13-203ENST00000431540 NCBP3Q53F19 620 aaKnown RBP15.6■□□□□ 0.09
CDH13-203ENST00000431540 CAPN15O75808 1086 aa15.57■□□□□ 0.08
CDH13-203ENST00000431540 SPINK5Q9NQ38 1064 aaPredicted RBP15.57■□□□□ 0.08
CDH13-203ENST00000431540 ABCC8Q09428 1581 aa15.55■□□□□ 0.08
CDH13-203ENST00000431540 URB2Q14146 1524 aaKnown RBP15.55■□□□□ 0.08
CDH13-203ENST00000431540 U3KPZ7 1027 aaPredicted RBP15.55■□□□□ 0.08
CDH13-203ENST00000431540 TRIM41Q8WV44 630 aa15.51■□□□□ 0.07
CDH13-203ENST00000431540 IFT140Q96RY7 1462 aa15.49■□□□□ 0.07
CDH13-203ENST00000431540 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
CDH13-203ENST00000431540 TOPBP1Q92547 1522 aa15.41■□□□□ 0.06
CDH13-203ENST00000431540 DNMBPQ6XZF7 1577 aa15.37■□□□□ 0.05
CDH13-203ENST00000431540 NPM3O75607 178 aaKnown RBP15.37■□□□□ 0.05
CDH13-203ENST00000431540 ZNF608Q9ULD9 1512 aaPredicted RBP15.33■□□□□ 0.05
CDH13-203ENST00000431540 RIMBP3CA6NJZ7 1639 aa15.33■□□□□ 0.04
CDH13-203ENST00000431540 RIMBP3BA6NNM3 1639 aa15.33■□□□□ 0.04
CDH13-203ENST00000431540 RIMBP3Q9UFD9 1639 aa15.33■□□□□ 0.04
CDH13-203ENST00000431540 WDR97A6NE52 1622 aa15.31■□□□□ 0.04
CDH13-203ENST00000431540 TARBP1Q13395 1621 aaKnown RBP15.31■□□□□ 0.04
CDH13-203ENST00000431540 EIF4G3O43432 1585 aaKnown RBP15.29■□□□□ 0.04
CDH13-203ENST00000431540 ARHGEF11O15085 1522 aa15.27■□□□□ 0.04
CDH13-203ENST00000431540 CHD1O14646 1710 aa15.23■□□□□ 0.03
CDH13-203ENST00000431540 POLA1P09884 1462 aaPredicted RBP15.22■□□□□ 0.03
CDH13-203ENST00000431540 AQRO60306 1485 aaKnown RBP eCLIP15.2■□□□□ 0.02
CDH13-203ENST00000431540 SOGA1O94964 1423 aa15.19■□□□□ 0.02
CDH13-203ENST00000431540 CYB5RLQ6IPT4 315 aa15.15■□□□□ 0.02
CDH13-203ENST00000431540 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
CDH13-203ENST00000431540 ABCB7O75027 752 aa15.13■□□□□ 0.01
CDH13-203ENST00000431540 TRHP20396 242 aaPredicted RBP15.12■□□□□ 0.01
CDH13-203ENST00000431540 FBLN2P98095 1184 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms